Genome-wide identification of xylan glucuronosyltransferase family in cotton and function characterization of GhGUX5 in regulating Verticillium wilt resistance.

[1]  A. Ramsubhag,et al.  Transcriptomic changes induced by applications of a commercial extract of Ascophyllum nodosum on tomato plants , 2022, Scientific Reports.

[2]  Min Wang,et al.  Genome-wide Characterization of the JmjC Domain-Containing Histone Demethylase Gene Family Reveals GhJMJ24 and GhJMJ49 Involving in Somatic Embryogenesis Process in Cotton , 2022, Frontiers in Molecular Biosciences.

[3]  Y. Gan,et al.  C2H2 Zinc Finger Proteins Response to Abiotic Stress in Plants , 2022, International journal of molecular sciences.

[4]  Fuguang Li,et al.  GhODO1, an R2R3-type MYB transcription factor, positively regulates cotton resistance to Verticillium dahliae via the lignin biosynthesis and jasmonic acid signaling pathway. , 2022, International journal of biological macromolecules.

[5]  Zili Feng,et al.  Calcium-Dependent Protein Kinase GhCDPK28 Was Dentified and Involved in Verticillium Wilt Resistance in Cotton , 2021, Frontiers in Plant Science.

[6]  Zili Feng,et al.  MPK homolog GhNTF6 was involved in cotton against Verticillium wilt by interacted with VdEPG1. , 2021, International journal of biological macromolecules.

[7]  A. Shankhapal,et al.  Genome-wide miRNAs profiles of pearl millet under contrasting high vapor pressure deficit reveal their functional roles in drought stress adaptations. , 2021, Physiologia plantarum.

[8]  Bing-kai Hou,et al.  A novel pathogen-responsive glycosyltransferase UGT73C7 mediates the redirection of phenylpropanoid metabolism and promotes SNC1-dependent Arabidopsis immunity. , 2021, The Plant Journal.

[9]  Longfu Zhu,et al.  GhWRKY1-like enhances cotton resistance to Verticillium dahliae via an increase in defense-induced lignification and S monolignol content. , 2021, Plant science : an international journal of experimental plant biology.

[10]  Zili Feng,et al.  Genome-Wide Analysis of Ribosomal Protein GhRPS6 and Its Role in Cotton Verticillium Wilt Resistance , 2021, International journal of molecular sciences.

[11]  Zhongxu Lin,et al.  A global survey of the gene network and key genes for oil accumulation in cultivated tetraploid cottons , 2020, Plant biotechnology journal.

[12]  Zili Feng,et al.  A cotton WAKL protein interacted with a DnaJ protein and was involved in defense against Verticillium dahliae. , 2020, International journal of biological macromolecules.

[13]  Zili Feng,et al.  CGTase, a novel antimicrobial protein from Bacillus cereus YUPP‐10, suppresses Verticillium dahliae and mediates plant defence responses , 2020, Molecular plant pathology.

[14]  T. Zhao,et al.  Genome-wide identification and functional analysis of the ERF2 gene family in response to disease resistance against Stemphylium lycopersici in tomato , 2020, BMC plant biology.

[15]  Margaret H. Frank,et al.  TBtools - an integrative toolkit developed for interactive analyses of big biological data. , 2020, Molecular plant.

[16]  Baoshan Wang,et al.  C2H2 Zinc Finger Proteins: Master Regulators of Abiotic Stress Responses in Plants , 2020, Frontiers in Plant Science.

[17]  Fuguang Li,et al.  Mechanismal analysis of resistance to Verticillium dahliae in upland cotton conferred by overexpression of RPL18A-6 (Ribosomal Protein L18A-6) , 2019 .

[18]  Yuan-yuan Fang,et al.  A Brassica miRNA Regulates Plant Growth and Immunity through Distinct Modes of Action. , 2019, Molecular plant.

[19]  Narmada Thanki,et al.  CDD/SPARCLE: the conserved domain database in 2020 , 2019, Nucleic Acids Res..

[20]  Tianzhen Zhang,et al.  Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton , 2019, Nature Genetics.

[21]  Hongkun Zheng,et al.  Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense , 2018, Nature Genetics.

[22]  Jing Zhao,et al.  The cotton laccase gene GhLAC15 enhances Verticillium wilt resistance via an increase in defence‐induced lignification and lignin components in the cell walls of plants , 2018, Molecular plant pathology.

[23]  Wei Fan,et al.  Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits , 2018, Nature Genetics.

[24]  Bing-kai Hou,et al.  Modulation of Plant Salicylic Acid-Associated Immune Responses via Glycosylation of Dihydroxybenzoic Acids1 , 2018, Plant Physiology.

[25]  W. Ye,et al.  Comparative Analysis of Cotton Small RNAs and Their Target Genes in Response to Salt Stress , 2017, Genes.

[26]  Xueyuan Li,et al.  Genetic diversity and structure of elite cotton germplasm (Gossypium hirsutum L.) using genome-wide SNP data , 2017, Genetica.

[27]  Sandui Guo,et al.  CottonFGD: an integrated functional genomics database for cotton , 2017, BMC Plant Biology.

[28]  C. Fu,et al.  UDP-glycosyltransferase 72B1 catalyzes the glucose conjugation of monolignols and is essential for the normal cell wall lignification in Arabidopsis thaliana. , 2016, The Plant journal : for cell and molecular biology.

[29]  B. Meyers,et al.  The Diversification of Plant NBS-LRR Defense Genes Directs the Evolution of MicroRNAs That Target Them , 2016, Molecular biology and evolution.

[30]  Shin-Han Shiu,et al.  Evolution of Gene Duplication in Plants1[OPEN] , 2016, Plant Physiology.

[31]  Sudhir Kumar,et al.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.

[32]  S. Klosterman,et al.  VdCYC8, Encoding CYC8 Glucose Repression Mediator Protein, Is Required for Microsclerotia Formation and Full Virulence in Verticillium dahliae , 2015, PloS one.

[33]  Lei Fang,et al.  Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement , 2015, Nature Biotechnology.

[34]  He Zhang,et al.  Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution , 2015, Nature Biotechnology.

[35]  Caiping Cai,et al.  Genome-wide identification of mitogen-activated protein kinase gene family in Gossypium raimondii and the function of their corresponding orthologs in tetraploid cultivated cotton , 2014, BMC Plant Biology.

[36]  W. Boerjan,et al.  The role of the secondary cell wall in plant resistance to pathogens , 2014, Front. Plant Sci..

[37]  Wenqin Wang,et al.  RNA-Seq transcriptome analysis of Spirodela dormancy without reproduction , 2014, BMC Genomics.

[38]  Zhaoqing Chu,et al.  Genome-Wide Evolutionary Characterization and Expression Analyses of WRKY Family Genes in Brachypodium distachyon , 2014, DNA research : an international journal for rapid publication of reports on genes and genomes.

[39]  Yuzhen Shi,et al.  Analysis of sea-island cotton and upland cotton in response to Verticillium dahliae infection by RNA sequencing , 2013, BMC Genomics.

[40]  Ping Zheng,et al.  CottonGen: a genomics, genetics and breeding database for cotton research , 2013, Nucleic Acids Res..

[41]  Y. Pei,et al.  The Dual Functions of WLIM1a in Cell Elongation and Secondary Wall Formation in Developing Cotton Fibers[C][W] , 2013, Plant Cell.

[42]  Longfu Zhu,et al.  Proteomic and Virus-induced Gene Silencing (VIGS) Analyses Reveal That Gossypol, Brassinosteroids, and Jasmonic acid Contribute to the Resistance of Cotton to Verticillium dahliae * , 2013, Molecular & Cellular Proteomics.

[43]  David M Brown,et al.  GUX1 and GUX2 glucuronyltransferases decorate distinct domains of glucuronoxylan with different substitution patterns. , 2013, The Plant journal : for cell and molecular biology.

[44]  Adi Doron-Faigenboim,et al.  Ecology, Evolution and Organismal Biology Publications Ecology, Evolution and Organismal Biology Repeated Polyploidization of Gossypium Genomes and the Evolution of Spinnable Cotton Fibres , 2022 .

[45]  John Z. Yu,et al.  The draft genome of a diploid cotton Gossypium raimondii , 2012, Nature Genetics.

[46]  S. Persson,et al.  An update on xylan synthesis. , 2012, Molecular plant.

[47]  J. Keasling,et al.  Three Members of the Arabidopsis Glycosyltransferase Family 8 Are Xylan Glucuronosyltransferases1[W][OA] , 2012, Plant Physiology.

[48]  S. Bhattacharjee,et al.  Effector-triggered immunity signaling: from gene-for-gene pathways to protein-protein interaction networks. , 2012, Molecular plant-microbe interactions : MPMI.

[49]  Vassilios Ioannidis,et al.  ExPASy: SIB bioinformatics resource portal , 2012, Nucleic Acids Res..

[50]  Bing-kai Hou,et al.  Over-expression of a putative poplar glycosyltransferase gene, PtGT1, in tobacco increases lignin content and causes early flowering , 2012, Journal of experimental botany.

[51]  B. Baker,et al.  MicroRNA regulation of plant innate immune receptors , 2012, Proceedings of the National Academy of Sciences.

[52]  P. Schmitt‐Kopplin,et al.  The Arabidopsis Glucosyltransferase UGT76B1 Conjugates Isoleucic Acid and Modulates Plant Defense and Senescence[C][W][OA] , 2011, Plant Cell.

[53]  Lili Tu,et al.  Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry , 2011, Journal of experimental botany.

[54]  Damian Szklarczyk,et al.  The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored , 2010, Nucleic Acids Res..

[55]  K. Seffen,et al.  Absence of branches from xylan in Arabidopsis gux mutants reveals potential for simplification of lignocellulosic biomass , 2010, Proceedings of the National Academy of Sciences.

[56]  A. Faik.  Xylan Biosynthesis: News from the Grass1 , 2010, Plant Physiology.

[57]  G. Pesole,et al.  High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera , 2009, BMC Genomics.

[58]  T. Giordani,et al.  Isolation and expression analysis of low temperature-induced genes in white poplar (Populus alba). , 2009, Journal of plant physiology.

[59]  Steven J. M. Jones,et al.  Circos: an information aesthetic for comparative genomics. , 2009, Genome research.

[60]  Mikael Bodén,et al.  MEME Suite: tools for motif discovery and searching , 2009, Nucleic Acids Res..

[61]  T. Boller,et al.  Innate Immunity in Plants: An Arms Race Between Pattern Recognition Receptors in Plants and Effectors in Microbial Pathogens , 2009, Science.

[62]  T. Boller,et al.  A renaissance of elicitors: perception of microbe-associated molecular patterns and danger signals by pattern-recognition receptors. , 2009, Annual review of plant biology.

[63]  V. Chiang,et al.  MicroRNAs in loblolly pine (Pinus taeda L.) and their association with fusiform rust gall development. , 2007, The Plant journal : for cell and molecular biology.

[64]  B. Thomma,et al.  Physiology and molecular aspects of Verticillium wilt diseases caused by V. dahliae and V. albo-atrum. , 2006, Molecular plant pathology.

[65]  C. Gachon,et al.  Pathogen-Responsive Expression of Glycosyltransferase Genes UGT73B3 and UGT73B5 Is Necessary for Resistance to Pseudomonas syringae pv tomato in Arabidopsis[W] , 2005, Plant Physiology.

[66]  J. Wendel,et al.  Evolution and expression of MYB genes in diploid and polyploid cotton , 2003, Plant Molecular Biology.

[67]  J. Strominger,et al.  A modified colorimetric method for the estimation of N-acetylamino sugars. , 1955, The Journal of biological chemistry.

[68]  Guan-shan Liu,et al.  MapGene2Chrom, a tool to draw gene physical map based on Perl and SVG languages. , 2015, Yi chuan = Hereditas.

[69]  C. Gachon,et al.  Over-expression of a scopoletin glucosyltransferase in Nicotiana tabacum leads to precocious lesion formation during the hypersensitive response to tobacco mosaic virus but does not affect virus resistance , 2004, Plant Molecular Biology.

[70]  Kathleen Marchal,et al.  PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences , 2002, Nucleic Acids Res..

[71]  C. Janeway,et al.  Innate immune recognition. , 2002, Annual review of immunology.

[72]  J. Chory,et al.  Light control of plant development. , 1997, Annual review of cell and developmental biology.

[73]  Identification and Characterization of Circular RNAs in Brassica rapa in Response to Plasmodiophora brassicae , 2022 .