The role of protein structure in genomics
暂无分享,去创建一个
[1] Yunje Cho,et al. Structure-based identification of a novel NTPase from Methanococcus jannaschii , 1999, Nature Structural Biology.
[2] M J Sippl,et al. Helmholtz free energy of peptide hydrogen bonds in proteins. , 1996, Journal of molecular biology.
[3] M J Sippl,et al. Assembly of polypeptide and protein backbone conformations from low energy ensembles of short fragments: Development of strategies and construction of models for myoglobin, lysozyme, and thymosin β4 , 1992, Protein science : a publication of the Protein Society.
[4] S. Brenner. Errors in genome annotation. , 1999, Trends in genetics : TIG.
[5] A G Murzin,et al. SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.
[6] B. Barrell,et al. Life with 6000 Genes , 1996, Science.
[7] C. Chothia,et al. Population statistics of protein structures: lessons from structural classifications. , 1997, Current opinion in structural biology.
[8] W A Koppensteiner,et al. Characterization of novel proteins based on known protein structures. , 2000, Journal of molecular biology.
[9] M. Sippl. Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins. , 1990, Journal of molecular biology.
[10] R. Fleischmann,et al. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.
[11] T. N. Bhat,et al. The Protein Data Bank , 2000, Nucleic Acids Res..
[12] Michael Levitt,et al. A brighter future for protein structure prediction , 1999, Nature Structural Biology.
[13] Andrew Smith. Genome sequence of the nematode C-elegans: A platform for investigating biology , 1998 .
[14] K. Volz. A test case for structure‐based functional assignment: The 1.2 Å crystal structure of the yjgF gene product from Escherichia coli , 2008, Protein science : a publication of the Protein Society.
[15] S. Kim,et al. Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[16] A. Murzin. How far divergent evolution goes in proteins. , 1998, Current opinion in structural biology.
[17] W. Pearson. Effective protein sequence comparison. , 1996, Methods in enzymology.
[18] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[19] 김삼묘,et al. “Bioinformatics” 특집을 내면서 , 2000 .
[20] Miguel A. Andrade-Navarro,et al. Automated genome sequence analysis and annotation , 1999, Bioinform..
[21] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[22] G. Klebe,et al. Knowledge-based scoring function to predict protein-ligand interactions. , 2000, Journal of molecular biology.
[23] M. Sippl,et al. Helmholtz free energies of atom pair interactions in proteins. , 1996, Folding & design.
[24] A. Sali,et al. Structural genomics: beyond the Human Genome Project , 1999, Nature Genetics.
[25] J. Janin,et al. A soft, mean-field potential derived from crystal contacts for predicting protein-protein interactions. , 1998, Journal of molecular biology.
[26] J. Skolnick,et al. Structure‐based functional motif identifies a potential disulfide oxidoreductase active site in the serine/threonine protein phosphatase‐1 subfamily , 1999, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[27] David C. Jones,et al. CATH--a hierarchic classification of protein domain structures. , 1997, Structure.
[28] George D. Rose,et al. Identifying two ancient enzymes in Archaea using predicted secondary structure alignment , 1999, Nature Structural Biology.
[29] Richard Bonneau,et al. Ab initio protein structure prediction of CASP III targets using ROSETTA , 1999, Proteins.
[30] C Sander,et al. Mapping the Protein Universe , 1996, Science.
[31] D T Jones,et al. A systematic comparison of protein structure classifications: SCOP, CATH and FSSP. , 1999, Structure.
[32] C Colovos,et al. The 1.8 A crystal structure of the ycaC gene product from Escherichia coli reveals an octameric hydrolase of unknown specificity. , 1998, Structure.
[33] L. Kuhn,et al. The accessory subunit of mtDNA polymerase shares structural homology with aminoacyl-tRNA synthetases: implications for a dual role as a primer recognition factor and processivity clamp. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[34] David C. Jones,et al. Contemporary approaches to protein structure classification , 1998, BioEssays : news and reviews in molecular, cellular and developmental biology.
[35] M J Sippl,et al. Who solved the protein folding problem? , 1999, Structure.
[36] C. Chothia. One thousand families for the molecular biologist , 1992, Nature.
[37] A M Lesk,et al. Comparison of the structures of globins and phycocyanins: Evidence for evolutionary relationship , 1990, Proteins.
[38] M J Sippl,et al. Optimum superimposition of protein structures: ambiguities and implications. , 1996, Folding & design.
[39] B. Rost,et al. Prediction of protein secondary structure at better than 70% accuracy. , 1993, Journal of molecular biology.
[40] C. Sander,et al. Genomic medicine and the future of health care. , 2000, Science.