Brief history of agricultural systems modeling

Agricultural systems science generates knowledge that allows researchers to consider complex problems or take informed agricultural decisions. The rich history of this science exemplifies the diversity of systems and scales over which they operate and have been studied. Modeling, an essential tool in agricultural systems science, has been accomplished by scientists from a wide range of disciplines, who have contributed concepts and tools over more than six decades. As agricultural scientists now consider the “next generation” models, data, and knowledge products needed to meet the increasingly complex systems problems faced by society, it is important to take stock of this history and its lessons to ensure that we avoid re-invention and strive to consider all dimensions of associated challenges. To this end, we summarize here the history of agricultural systems modeling and identify lessons learned that can help guide the design and development of next generation of agricultural system tools and methods. A number of past events combined with overall technological progress in other fields have strongly contributed to the evolution of agricultural system modeling, including development of process-based bio-physical models of crops and livestock, statistical models based on historical observations, and economic optimization and simulation models at household and regional to global scales. Characteristics of agricultural systems models have varied widely depending on the systems involved, their scales, and the wide range of purposes that motivated their development and use by researchers in different disciplines. Recent trends in broader collaboration across institutions, across disciplines, and between the public and private sectors suggest that the stage is set for the major advances in agricultural systems science that are needed for the next generation of models, databases, knowledge products and decision support systems. The lessons from history should be considered to help avoid roadblocks and pitfalls as the community develops this next generation of agricultural systems models.

[1]  L. M. Thompson Weather and Technology in the Production of Corn in the U. S. Corn Belt1 , 1969 .

[2]  J. Dillon,et al.  Agricultural Decision Analysis , 1977 .

[3]  F. J. Pierce,et al.  The state of site specific management for agriculture. , 1997 .

[4]  L. A. Richards Capillary conduction of liquids through porous mediums , 1931 .

[5]  Joe T. Ritchie International consortium for agricultural systems applications (ICASA): Establishment and purpose , 1995 .

[6]  Graeme L. Hammer,et al.  APSIM: a novel software system for model development, model testing and simulation in agricultural systems research , 1996 .

[7]  David C. Coleman,et al.  From the Frontier to the Biosphere , 2004 .

[8]  S. McNaughton,et al.  Modelling primary production of perennial graminoids 3$̄uniting physiological processes and morphometric traits , 1984 .

[9]  James W. Jones,et al.  Integrated description of agricultural field experiments and production: The ICASA Version 2.0 data standards , 2013 .

[10]  J. Houghton,et al.  Climate change : the IPCC scientific assessment , 1990 .

[11]  J. W. Jones,et al.  REDUCED STATE–VARIABLE TOMATO GROWTH MODEL , 1999 .

[12]  Jeffrey W. White,et al.  Decision Support System for Agrotechnology Transfer (DSSAT) Version 4.5 [CD-ROM] , 2012 .

[13]  James W. Jones,et al.  RESPONSE OF CROP YIELD TO PREDICTED CHANGES IN CLIMATE AND ATMOSPHERIC CO2 USING SIMULATION , 1990 .

[14]  Ken E. Giller,et al.  Identifying key entry-points for strategic management of smallholder farming systems in sub-Saharan Africa using the dynamic farm-scale simulation model NUANCES-FARMSIM , 2009 .

[15]  James W. Jones,et al.  Uncertainty in Simulating Wheat Yields Under Climate Change , 2013 .

[16]  William W. Murdoch,et al.  POPULATION REGULATION IN THEORY AND PRACTICE , 1994 .

[17]  James W. Jones,et al.  Predicting maize phenology: intercomparison of functions for developmental response to temperature , 2014 .

[18]  R. Brink,et al.  A framework for land evaluation , 1977 .

[19]  Bas Eickhout,et al.  Exploring changes in world ruminant production systems , 2005 .

[20]  C. H. M. van Bavel,et al.  A Drought Criterion and Its Application in Evaluating Drought Incidence and Hazard1 , 1953 .

[21]  John R. Anderson,et al.  MACHINE LEARNING An Artificial Intelligence Approach , 2009 .

[22]  Earl O. Heady,et al.  Agricultural Production Functions , 1962 .

[23]  Jerry C. Ritchie,et al.  The Agricultural Research Service's Remote Sensing Program: An Example of Interagency Collaboration , 2003 .

[24]  J. von Braun,et al.  Climate Change Impacts on Global Food Security , 2013, Science.

[25]  James W. Jones,et al.  Modeling Soybean Growth for Crop Management , 1983 .

[26]  I. R. Johnson,et al.  Vegetative crop growth model incorporating leaf area expansion and senescence, and applied to grass , 1983 .

[27]  D. Lobell,et al.  Climate Trends and Global Crop Production Since 1980 , 2011, Science.

[28]  Howard W. Beck,et al.  SOYBUG: An expert system for soybean insect pest management , 1989 .

[29]  Sri Lanka,et al.  Facing Climate Change by Securing Water for Food, Livelihoods and Ecosystems , 2007 .

[30]  Martin K. van Ittersum Integrated Assessment of Agricultural Systems – a Modular System for Agricultural and Environmental Modelling (SEAMLESS-IF) , 2018 .

[31]  James W. Jones,et al.  Working with Dynamic Crop Models: Methods, Tools and Examples for Agriculture and Environment , 2014 .

[32]  J. Antle Testing The Stochastic Structure Of Production: A Flexible Moment-Based Approach , 1983 .

[33]  E. Stehfest,et al.  Global trends and uncertainties in terrestrial denitrification and N2O emissions , 2013, Philosophical Transactions of the Royal Society B: Biological Sciences.

[34]  P. V. Soest,et al.  A net carbohydrate and protein system for evaluating cattle diets: III. Cattle requirements and diet adequacy. , 1992, Journal of animal science.

[35]  Bernard Vanlauwe,et al.  Aggregating field-scale knowledge into farm-scale models of African smallholder systems: Summary functions to simulate crop production using APSIM , 2008 .

[36]  M. Parrya,et al.  Effects of climate change on global food production under SRES emissions and socio-economic scenarios , 2004 .

[37]  James W. Jones,et al.  Towards a new generation of agricultural system data, models and knowledge products: Design and improvement , 2017, Agricultural systems.

[38]  D. R. Buxton,et al.  Cotton: A Computer Simulation of Cotton Growth , 1974 .

[39]  Bruce A. Kimball Lessons from FACE: CO2 Effects and Interactions with Water, Nitrogen and Temperature , 2010 .

[40]  Ulrich Rendtel,et al.  Editorial , 2014, Journal of basic microbiology.

[41]  P. V. Soest,et al.  A net carbohydrate and protein system for evaluating cattle diets: I. Ruminal fermentation. , 1992, Journal of animal science.

[42]  Jesse B. Tack,et al.  Effect of warming temperatures on US wheat yields , 2015, Proceedings of the National Academy of Sciences.

[43]  N. Ramankutty,et al.  Farming the planet: 2. Geographic distribution of crop areas, yields, physiological types, and net primary production in the year 2000 , 2008 .

[44]  George E. P. Box,et al.  Empirical Model‐Building and Response Surfaces , 1988 .

[45]  Peter deVoil,et al.  A participatory whole farm modelling approach to understand impacts and increase preparedness to climate change in Australia , 2014 .

[46]  James W. Jones,et al.  Decision support systems for agricultural development , 1993 .

[47]  Jeffrey W. White,et al.  Improving Physiological Assumptions Of Simulation Models By Using Gene‐Based Approaches , 2003 .

[48]  James W. Jones,et al.  The DSSAT cropping system model , 2003 .

[49]  Otto C. Doering,et al.  Effects of climate change and variability on agricultural production systems , 2002 .

[50]  G. Hoogenboom,et al.  Understanding Options for Agricultural Production , 1998, Systems Approaches for Sustainable Agricultural Development.

[51]  Gregory L. Tylka,et al.  A MODELING APPROACH TO QUANTIFY THE EFFECTS OF SPATIAL SOYBEAN YIELD LIMITING FACTORS , 2001 .

[52]  James W. Jones,et al.  A Gene‐Based Model to Simulate Soybean Development and Yield Responses to Environment , 2006 .

[53]  Philippe Lecomte,et al.  GAMEDE: A global activity model for evaluating the sustainability of dairy enterprises Part I - Whole-farm dynamic model , 2009 .

[54]  Steffen Fritz,et al.  The Need for Improved Maps of Global Cropland , 2013 .

[55]  H. Steinfeld,et al.  Livestock's Long Shadow , 2006 .

[56]  James W. Jones,et al.  POTENTIAL USES AND LIMITATIONS OF CROP MODELS , 1996 .

[57]  Randy Showstack Call for improving air quality , 2013 .

[58]  J. Berry,et al.  A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species , 1980, Planta.

[59]  R. Rabbinge,et al.  Explanatory models in crop physiology , 1979 .

[60]  M. S. Allen,et al.  Assessing Forage Quality Using Integrated Models of Intake and Digestion by Ruminants , 2015 .

[61]  Tanda Panjaitan,et al.  A participatory, farming systems approach to improving Bali cattle production in the smallholder crop–livestock systems of Eastern Indonesia , 2010 .

[62]  James W. Jones,et al.  Testing Effects of Climate Change in Crop Models , 2010 .

[63]  James W. Jones,et al.  Global climate change and US agriculture , 1990, Nature.

[64]  James W. Jones,et al.  EXTENDING THE USE OF CROP MODELS TO STUDY PEST DAMAGE , 1993 .

[65]  S. Long,et al.  Food for Thought: Lower-Than-Expected Crop Yield Stimulation with Rising CO2 Concentrations , 2006, Science.

[66]  John M. Antle,et al.  Towards a new generation of agricultural system data, models and knowledge products: Information and communication technology , 2017, Agricultural systems.

[67]  Bas Eickhout,et al.  Looking into the future for agriculture and AKST , 2009 .

[68]  K. Boote,et al.  Coupling Pests to Crop Growth Simulators to Predict Yield Reductions , 1983 .

[69]  James W. Jones,et al.  Modeling growth and yield of groundnut , 1992 .

[70]  Brian Keating,et al.  Strategies for Sustainable Crop Production in Semi-Arid Africa , 1992 .

[71]  Joe T. Ritchie,et al.  Model for predicting evaporation from a row crop with incomplete cover , 1972 .

[72]  J. Goudriaan,et al.  ON APPROACHES AND APPLICATIONS OF THE WAGENINGEN CROP MODELS , 2003 .

[73]  Andreas Hieronymi,et al.  Understanding Systems Science: A Visual and Integrative Approach , 2013 .

[74]  Richard E. Plant,et al.  An integrated expert decision support system for agricultural management , 1989 .

[75]  M. Obersteiner,et al.  Biomass use, production, feed efficiencies, and greenhouse gas emissions from global livestock systems , 2013, Proceedings of the National Academy of Sciences.

[76]  David M. Lawrence,et al.  Examining the Interaction of Growing Crops with Local Climate Using a Coupled Crop–Climate Model , 2009 .

[77]  N. Ramankutty,et al.  Estimating historical changes in global land cover: Croplands from 1700 to 1992 , 1999 .

[78]  J. B. Dent,et al.  Systems Simulation in Agriculture , 1979, Springer Netherlands.

[79]  Aalt A. Dijkhuizen,et al.  Studies on the replacement policies in dairy cattle. III. Influence of variation in reproduction and production , 1985 .

[80]  E. R. Ørskov,et al.  The estimation of protein degradability in the rumen from incubation measurements weighted according to rate of passage , 1979, The Journal of Agricultural Science.

[81]  Jerry W. Stuth,et al.  Decision support systems for the management of grazing lands: emerging issues , 1993 .

[82]  B. Walsh,et al.  Models for navigating biological complexity in breeding improved crop plants. , 2006, Trends in plant science.

[83]  Will Steffen,et al.  Global change and terrestrial ecosystems. The operational plan. , 1992 .

[84]  H. D. Bowen,et al.  Development of a Nitrogen Balance for Cotton Growth Models: A First Approximation1 , 1974 .

[85]  Patricia M. Kristjanson,et al.  Mapping Climate Vulnerability and Poverty in Africa , 2006 .

[86]  P. J. van Blokland,et al.  FinARS: A financial analysis review expert system , 1989 .

[87]  R. L. McCown,et al.  An evaluation of the influence of available soil water storage capacity on growing season length and yield of tropical pastures using simple water balance models , 1973 .

[88]  David Parsons,et al.  Farm household models to analyse food security in a changing climate: a review , 2014 .

[89]  Ian T. Foster,et al.  Globus Online: Accelerating and Democratizing Science through Cloud-Based Services , 2011, IEEE Internet Computing.

[90]  K. G. Renard,et al.  EPIC: A new method for assessing erosion's effect on soil productivity , 1983 .

[91]  N. Ramankutty,et al.  Farming the planet: 1. Geographic distribution of global agricultural lands in the year 2000 , 2008 .

[92]  H. van Keulen,et al.  The 'School of de Wit' crop growth simulation models: a pedigree and historical overview. , 1996 .

[93]  Jorge Alberto Elizondo-Salazar,et al.  Estimación lineal de los requerimientos nutricionales del NRC para ganado de leche. , 2014 .

[94]  Earl O. Heady An Econometric Investigation of the Technology of Agricultural Production Functions , 1957 .

[95]  J. B. Dent,et al.  Bio-economic evaluation of dairy farm management scenarios using integrated simulation and multiple-criteria models , 1999 .

[96]  C. T. de Wit,et al.  Transpiration and crop yields. , 1958 .

[97]  Martijn Gough Climate change , 2009, Canadian Medical Association Journal.

[98]  James W. Jones,et al.  Climate adaptation imperatives: untapped global maize yield opportunities , 2014 .

[99]  J. Antle Econometric Estimation of Producers' Risk Attitudes , 1987 .

[100]  Tom Addiscott,et al.  Concepts of solute leaching in soils: a review of modelling approaches , 1985 .

[101]  John M. Antle,et al.  Next generation agricultural system data, models and knowledge products: Introduction , 2017, Agricultural systems.

[102]  James W. Jones,et al.  Cropping Systems Modeling in AgMIP: A New Protocol-Driven Approach for Regional Integrated Assessments , 2015 .

[103]  Klaus Frohberg,et al.  Impacts of potential climate change on global and regional food production and vulnerability , 1996 .

[104]  J. O. Sanders,et al.  A general cattle production systems model. Part 2—Procedures used for simulating animal performance , 1979 .

[105]  L. Bastiaans Simulation and systems analysis for rice production (SARP) , 1991 .

[106]  J. Donnelly,et al.  GRAZPLAN: Decision support systems for Australian grazing enterprises—II. The animal biology model for feed intake, production and reproduction and the GrazFeed DSS , 1997 .

[107]  Joe T. Ritchie,et al.  Overview of Crop Models for Assessment of Crop Production , 2002 .

[108]  L. S. Pereira,et al.  Crop evapotranspiration : guidelines for computing crop water requirements , 1998 .

[109]  C. Stöckle,et al.  CropSyst, a cropping systems simulation model , 2003 .

[110]  Maximilian Auffhammer,et al.  Using Weather Data and Climate Model Output in Economic Analyses of Climate Change , 2013, Review of Environmental Economics and Policy.

[111]  H. Keulen,et al.  PAPRAN: a simulation model of annual pasture production limited by rainfall and nitrogen , 1981 .

[112]  F. J. Pierce,et al.  Modeling Crop Yield for Site-Specific Management , 1997 .

[113]  J. Passioura Simulation Models: Science, Snake Oil, Education, or Engineering? , 1996 .

[114]  A. Challinor,et al.  Design and optimisation of a large-area process-based model for annual crops , 2004 .

[115]  A. Ruane,et al.  Uncertainties in predicting rice yield by current crop models under a wide range of climatic conditions , 2015, Global change biology.

[116]  M. Freer,et al.  GRAZPLAN: Decision support systems for Australian grazing enterprises—I. Overview of the GRAZPLAN project, and a description of the MetAccess and LambAlive DSS , 1997 .

[117]  J. Ritchie,et al.  Wheat yield response to spatially variable nitrogen fertilizer in Mediterranean environment , 2013 .

[118]  M. Herreroa,et al.  Bio-economic evaluation of dairy farm management scenarios using integrated simulation and multiple-criteria models , 2000 .

[119]  M. Norman,et al.  Proceedings of the XI International Grassland Congress , 1972 .

[120]  P. Gerber,et al.  Nutrient use efficiency: a valuable approach to benchmark the sustainability of nutrient use in global livestock production , 2014 .

[121]  James W. Jones,et al.  Development, uncertainty and sensitivity analysis of the simple SALUS crop model in DSSAT , 2013 .

[122]  John D. Hesketh COTCROP: A Computer Model for Cotton Growth and Yield , 2018 .

[123]  J. P. Dempster,et al.  THE NATURAL CONTROL OF POPULATIONS OF BUTTERFLIES AND MOTHS , 1983 .

[124]  E. Schmid,et al.  Climate change mitigation through livestock system transitions , 2014, Proceedings of the National Academy of Sciences.

[125]  James W. Jones,et al.  Effects of climate change on US crop production: simulation results using two different GCM scenarios. Part I: Wheat, potato, maize, and citrus , 2002 .

[126]  J. B. Dent,et al.  Integrating simulation models to optimise nutrition and management for dairy farms: a methodology. pp. 322-326. In: Livestock Farming Systems: Research, Development, Socio-Economics and the Land Manager. Dent, J.B. et al (Eds.). , 1996 .

[127]  John M. Antle,et al.  Toward a new generation of agricultural system data, models, and knowledge products: State of agricultural systems science , 2017, Agricultural systems.

[128]  R. Rabbinge,et al.  Exploratory land use studies and their role in strategic policy making. , 1998 .

[129]  James W. Jones,et al.  Identifying irrigation and nitrogen best management practices for sweet corn production on sandy soils using CERES-Maize model , 2012 .

[130]  M. Donatelli,et al.  Integrated assessment of agricultural systems: a component - based framework for the European Union (Seamless) , 2008 .

[131]  Ralph Josselin The evolution of IBP , 1977, Medical History.

[132]  J. Antle,et al.  Econometric‐Process Models for Integrated Assessment of Agricultural Production Systems , 2001 .

[133]  J. B. Dent,et al.  The Plant/Animal Interface in Models of Grazing Systems , 2018, Agricultural Systems modeting and Simulation.

[134]  H. Steinfeld,et al.  Livestock's long shadow: environmental issues and options. , 2006 .

[135]  Y. Henry,et al.  The voluntary food intake of farm animals , 1987 .

[136]  Gerrit Hoogenboom,et al.  IMPACT: Generic household-level databases and diagnostics tools for integrated crop-livestock systems analysis , 2007 .

[137]  C. Rosenzweig,et al.  Potential impact of climate change on world food supply , 1994, Nature.

[138]  G. Conway The properties of agroecosystems , 1987 .

[139]  G. Judge,et al.  Agricultural Production Functions. , 1961 .

[140]  Sebastian J. Schreiber,et al.  A PHYSIOLOGICALLY BASED TRITROPHIC PERSPECTIVE ON BOTTOM-UP-TOP-DOWN REGULATION OF POPULATIONS' , 1994 .

[141]  Agholor Ewere Deborah,et al.  The Outcome of Perceived Service Quality Analysis on Customer Satisfaction in Retail Banking: A Case Study of Buffalo City in Eastern Cape, South Africa , 2016 .

[142]  C. Messina,et al.  Yield-trait performance landscapes: from theory to application in breeding maize for drought tolerance. , 2011, Journal of experimental botany.

[143]  David R. Lee,et al.  Climate Change: Impact on Agriculture and Costs of Adaptation , 2009 .

[144]  C. J. Stigter Climatic Risk in Crop Production: Models and Management for the Semiarid Tropics and Subtropics , 1992 .

[145]  William A. Williams,et al.  A model for simulating photosynthesis in plant communities , 1967 .

[146]  J. R. Kiniry,et al.  CERES-Maize: a simulation model of maize growth and development , 1986 .

[147]  Senthold Asseng,et al.  An overview of APSIM, a model designed for farming systems simulation , 2003 .

[148]  J. R. Ritchie,et al.  Description and performance of CERES-Wheat: a user-oriented wheat yield model , 1985 .

[149]  C. Müller,et al.  Constraints and potentials of future irrigation water availability on agricultural production under climate change , 2013, Proceedings of the National Academy of Sciences.

[150]  Jeffrey W. White,et al.  Simulating effects of genes for physiological traits in a process-oriented crop model , 1996 .

[151]  With contributions from , 2007 .

[152]  J. Marini,et al.  The effect of a ruminal nitrogen (N) deficiency in dairy cows: evaluation of the cornell net carbohydrate and protein system ruminal N deficiency adjustment. , 2002, Journal of dairy science.

[153]  G. Hj,et al.  Netherlands Scientific Council for Government Policy , 1992 .

[154]  F. M. Anderson,et al.  Cattle herd dynamics: An integer and stochastic model for evaluating production alternatives , 1982 .

[155]  James W. Jones,et al.  How do various maize crop models vary in their responses to climate change factors? , 2014, Global change biology.

[156]  J. Porter,et al.  A comparison of the models AFRCWHEAT2, CERES-Wheat, Sirius, SUCROS2 and SWHEAT with measurements from wheat grown under drought , 1998 .

[157]  G. M. Van Dyne,et al.  Grasslands, systems analysis, and man , 1981 .

[158]  James W. Jones,et al.  The Agricultural Model Intercomparison and Improvement Project (AgMIP): Protocols and Pilot Studies , 2013 .

[159]  G. M. Van Dyne,et al.  A research program for and the process of building and testing grassland ecosystem models , 1976 .

[160]  James W. Jones,et al.  AgClimate: A climate forecast information system for agricultural risk management in the southeastern USA , 2006 .

[161]  Martin J. Kropff,et al.  Simulation and systems analysis for rice production (SARP). Selected papers presented at workshops on crop simulation of a network of National and International Agricultural Research Centres of several Asian countries and The Netherlands, 1990-1991. , 1991 .

[162]  James W. Jones,et al.  An international collaborative network for agricultural systems applications (ICASA) , 2001 .

[163]  Claude B. Courbois,et al.  Livestock to 2020: The Next Food Revolution , 2001 .

[164]  M. Freer,et al.  Simulation of grazing systems. , 1980 .

[165]  P. Kyle,et al.  Climate change effects on agriculture: Economic responses to biophysical shocks , 2013, Proceedings of the National Academy of Sciences.

[166]  G. Uehara,et al.  Overview of IBSNAT , 1998 .

[167]  Graeme L. Hammer,et al.  Infusing the use of seasonal climate forecasting into crop management practice in North East Australia using discussion support software , 2002 .

[168]  James W. Jones,et al.  Spatial validation of crop models for precision agriculture , 2001 .

[169]  R. L. McCown,et al.  Changing systems for supporting farmers' decisions: problems, paradigms, and prospects , 2002 .

[170]  E. Schmid,et al.  Cattle ranching intensification in Brazil can reduce global greenhouse gas emissions by sparing land from deforestation , 2014, Proceedings of the National Academy of Sciences.

[171]  James W. Jones,et al.  The CROPGRO model for grain legumes , 1998 .

[172]  Mario Herrero,et al.  Integrated crop-livestock simulation models for scenario analysis and impact assessment , 2001 .

[173]  John R. Williams,et al.  The EPIC crop growth model , 1989 .

[174]  R. Just,et al.  Stochastic specification of production functions and economic implications , 1978 .

[175]  Robert M. May,et al.  Simple mathematical models with very complicated dynamics , 1976, Nature.

[176]  Jan Philipp Dietrich,et al.  Adaptation to climate change through the choice of cropping system and sowing date in sub-Saharan Africa , 2013 .

[177]  Ian T. Foster,et al.  The parallel system for integrating impact models and sectors (pSIMS) , 2013, Environ. Model. Softw..

[178]  James W. Jones,et al.  Assessing agricultural risks of climate change in the 21st century in a global gridded crop model intercomparison , 2013, Proceedings of the National Academy of Sciences.