Neuronal Calcium Wave Propagation Varies with Changes in Endoplasmic Reticulum Parameters: A Computer Model

Calcium () waves provide a complement to neuronal electrical signaling, forming a key part of a neuron’s second messenger system. We developed a reaction-diffusion model of an apical dendrite with diffusible inositol triphosphate (), diffusible , receptors (s), endoplasmic reticulum (ER) leak, and ER pump (SERCA) on ER. is released from ER stores via s upon binding of and . This results in -induced--release (CICR) and increases spread. At least two modes of wave spread have been suggested: a continuous mode based on presumed relative homogeneity of ER within the cell and a pseudo-saltatory model where regeneration occurs at discrete points with diffusion between them. We compared the effects of three patterns of hypothesized distribution: (1) continuous homogeneous ER, (2) hotspots with increased density ( hotspots), and (3) areas of increased ER density (ER stacks). All three modes produced waves with velocities similar to those measured in vitro (approximately 50–90 m /sec). Continuous ER showed high sensitivity to density increases, with time to onset reduced and speed increased. Increases in SERCA density resulted in opposite effects. The measures were sensitive to changes in density and spacing of hotspots and stacks. Increasing the apparent diffusion coefficient of   substantially increased wave speed. An extended electrochemical model, including voltage-gated calcium channels and AMPA synapses, demonstrated that membrane priming via AMPA stimulation enhances subsequent wave amplitude and duration. Our modeling suggests that pharmacological targeting of s and SERCA could allow modulation of wave propagation in diseases where dysregulation has been implicated.

[1]  R. Nuccitelli,et al.  Characterization of the sperm-induced calcium wave in Xenopus eggs using confocal microscopy. , 1998, Biophysical journal.

[2]  J. Rinzel,et al.  Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism. , 1994, Journal of theoretical biology.

[3]  A. West,et al.  Calcium regulation of neuronal gene expression , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[4]  G. Zamponi,et al.  Temperature dependence of T-type calcium channel gating , 2006, Neuroscience.

[5]  K. Gunter,et al.  Calcium and mitochondria , 2004, FEBS letters.

[6]  Leslie M Loew,et al.  Cortically restricted production of IP3 leads to propagation of the fertilization Ca2+ wave along the cell surface in a model of the Xenopus egg. , 2004, Journal of theoretical biology.

[7]  Shigeo Watanabe,et al.  Synaptically Activated Ca2+ Release From Internal Stores in CNS Neurons , 2005, Cellular and Molecular Neurobiology.

[8]  Perry L. Miller,et al.  Application of Technology: ModelDB: An Environment for Running and Storing Computational Models and Their Results Applied to Neuroscience , 1996, J. Am. Medical Informatics Assoc..

[9]  A. Koizumi,et al.  Does heterogeneity of intracellular Ca[Formula: see text] dynamics underlie speed tuning of direction-selective responses in starburst amacrine cells? , 2015, Journal of integrative neuroscience.

[10]  Nicholas T. Carnevale,et al.  The NEURON Book: Epilogue , 2006 .

[11]  Calcium regulation of HCN supports persistent activity associated with working memory: a multiscale model of prefrontal cortex , 2014, BMC Neuroscience.

[12]  R. Kretsinger,et al.  Structure and evolution of calcium-modulated proteins. , 1980, CRC critical reviews in biochemistry.

[13]  Bradford E. Peercy,et al.  Initiation and propagation of a neuronal intracellular calcium wave , 2008, Journal of Computational Neuroscience.

[14]  D. Clapham,et al.  Spiral calcium wave propagation and annihilation in Xenopus laevis oocytes. , 1991, Science.

[15]  Michael L. Hines,et al.  Reaction-diffusion in the NEURON simulator , 2013, Front. Neuroinform..

[16]  Samuel A. Neymotin,et al.  Synaptic Scaling Balances Learning in a Spiking Model of Neocortex , 2013, ICANNGA.

[17]  S. Tovey,et al.  IP(3) receptors: toward understanding their activation. , 2010, Cold Spring Harbor perspectives in biology.

[18]  V. Murthy,et al.  Dendritic Spines , 2002, Current Biology.

[19]  R K Wong,et al.  Calcium current activation kinetics in isolated pyramidal neurones of the Ca1 region of the mature guinea‐pig hippocampus. , 1987, The Journal of physiology.

[20]  Anna S. Bulanova,et al.  Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex , 2016, Neuroscience.

[21]  L. Stryer,et al.  Range of messenger action of calcium ion and inositol 1,4,5-trisphosphate. , 1992, Science.

[22]  L. Loew,et al.  A wave of IP3 production accompanies the fertilization Ca2+ wave in the egg of the frog, Xenopus laevis: theoretical and experimental support. , 2004, Cell calcium.

[23]  J. Kotaleski,et al.  Modelling the molecular mechanisms of synaptic plasticity using systems biology approaches , 2010, Nature Reviews Neuroscience.

[24]  J. Keizer,et al.  A single-pool inositol 1,4,5-trisphosphate-receptor-based model for agonist-stimulated oscillations in Ca2+ concentration. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[25]  Maria V. Sanchez-Vives,et al.  Hyperpolarization-activated graded persistent activity in the prefrontal cortex , 2008, Proceedings of the National Academy of Sciences.

[26]  Nicholas T. Carnevale,et al.  ModelDB: A Database to Support Computational Neuroscience , 2004, Journal of Computational Neuroscience.

[27]  Sten Orrenius,et al.  Calcium: Regulation of cell death: the calcium–apoptosis link , 2003, Nature Reviews Molecular Cell Biology.

[28]  D. McCormick,et al.  A model of the electrophysiological properties of thalamocortical relay neurons. , 1992, Journal of neurophysiology.

[29]  Michael L. Hines,et al.  Water-tight membranes from neuronal morphology files , 2013, Journal of Neuroscience Methods.

[30]  Jane Hartsfield A quantitative study of neuronal calcium signaling , 2005 .

[31]  P. Jedlicka,et al.  Understanding the role of synaptopodin and the spine apparatus in Hebbian synaptic plasticity – New perspectives and the need for computational modeling , 2017, Neurobiology of Learning and Memory.

[32]  M. Migliore,et al.  Control of GABA Release at Mossy Fiber-CA3 Connections in the Developing Hippocampus , 2010, Front. Syn. Neurosci..

[33]  Kim N. Green,et al.  Linking Calcium to Aβ and Alzheimer's Disease , 2008, Neuron.

[34]  E. Blalock,et al.  Calcium dysregulation in neuronal aging and Alzheimer's disease: history and new directions. , 1998, Cell calcium.

[35]  W. Lytton,et al.  Ih Tunes Theta/Gamma Oscillations and Cross-Frequency Coupling In an In Silico CA3 Model , 2013, PloS one.

[36]  Terence D. Sanger,et al.  Multitarget Multiscale Simulation for Pharmacological Treatment of Dystonia in Motor Cortex , 2016, Front. Pharmacol..

[37]  W. N. Ross,et al.  Priming of intracellular calcium stores in rat CA1 pyramidal neurons , 2007, The Journal of physiology.

[38]  Michael J. Berridge,et al.  Neuronal Calcium Signaling Review , 1998 .

[39]  Jesper Tegnér,et al.  Electrotonic Signals along Intracellular Membranes May Interconnect Dendritic Spines and Nucleus , 2008, PLoS Comput. Biol..

[40]  William W. Lytton,et al.  Electrostimulation to reduce synaptic scaling driven progression of Alzheimer's disease , 2014, Front. Comput. Neurosci..

[41]  P. Smolen,et al.  Calcium dynamics in large neuronal models , 1998 .

[42]  F. LaFerla Calcium dyshomeostasis and intracellular signalling in alzheimer's disease , 2002, Nature Reviews Neuroscience.

[43]  W. Lytton,et al.  Modeling molecular pathways of neuronal ischemia. , 2014, Progress in molecular biology and translational science.

[44]  John Rinzel,et al.  An intracellular Ca2+ subsystem as a biologically plausible source of intrinsic conditional bistability in a network model of working memory , 2006, Journal of Computational Neuroscience.

[45]  N. Slater,et al.  Continuous network of endoplasmic reticulum in cerebellar Purkinje neurons. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[46]  M. Berridge Neuronal Calcium Signaling , 1998, Neuron.

[47]  C. Koch,et al.  Methods in Neuronal Modeling: From Ions to Networks , 1998 .

[48]  R. Nuccitelli,et al.  An elevated free cytosolic Ca2+ wave follows fertilization in eggs of the frog, Xenopus laevis , 1985, The Journal of cell biology.

[49]  M E Martone,et al.  Three-dimensional visualization of the smooth endoplasmic reticulum in Purkinje cell dendrites , 1993, The Journal of neuroscience : the official journal of the Society for Neuroscience.

[50]  Grace E. Stutzmann Calcium Dysregulation, IP3 Signaling, and Alzheimer’s Disease , 2005, The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry.

[51]  M. Yeckel,et al.  Inositol‐1,4,5‐trisphosphate receptor‐mediated Ca2+ waves in pyramidal neuron dendrites propagate through hot spots and cold spots , 2009, The Journal of physiology.

[52]  K. T. Blackwell,et al.  Approaches and tools for modeling signaling pathways and calcium dynamics in neurons , 2013, Journal of Neuroscience Methods.

[53]  K M Harris,et al.  Three-Dimensional Organization of Smooth Endoplasmic Reticulum in Hippocampal CA1 Dendrites and Dendritic Spines of the Immature and Mature Rat , 1997, The Journal of Neuroscience.

[54]  G. Reiser,et al.  Calcium dysregulation and homeostasis of neural calcium in the molecular mechanisms of neurodegenerative diseases provide multiple targets for neuroprotection. , 2011, Antioxidants & redox signaling.

[55]  R. Yuste Dendritic Spines , 2010 .

[56]  R. Leapman,et al.  Activity-Dependent Calcium Sequestration in Dendrites of Hippocampal Neurons in Brain Slices , 1997, The Journal of Neuroscience.

[57]  Matthias Durr,et al.  Methods In Neuronal Modeling From Ions To Networks , 2016 .

[58]  J. Storm Intracellular injection of a Ca2+ chelator inhibits spike repolarization in hippocampal neurons , 1987, Brain Research.

[59]  P. Lipton,et al.  Ischemic cell death in brain neurons. , 1999, Physiological reviews.

[60]  W. N. Ross,et al.  Synergistic Release of Ca2+ from IP3-Sensitive Stores Evoked by Synaptic Activation of mGluRs Paired with Backpropagating Action Potentials , 1999, Neuron.

[61]  M. Stern,et al.  Buffering of calcium in the vicinity of a channel pore. , 1992, Cell calcium.

[62]  William W Lytton,et al.  Multiscale modeling for clinical translation in neuropsychiatric disease , 2014, Journal of computational surgery.