SCEC: A Novel Single-Cell Classification Method Based on Cell-Pair Ensemble Learning
暂无分享,去创建一个
Wei Fan | Haonan Peng | Siyin Luo | Chujie Fang | Yuanyuan Li | Yuanyuan Li | Wei Fan | Haonan Peng | Siying Luo | Chujie Fang
[1] Jin Gu,et al. VASC: Dimension Reduction and Visualization of Single-cell RNA-seq Data by Deep Variational Autoencoder , 2018, Genom. Proteom. Bioinform..
[2] M. Schaub,et al. SC3 - consensus clustering of single-cell RNA-Seq data , 2016, Nature Methods.
[3] R. Stewart,et al. Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm , 2016, Genome Biology.
[4] L. Hubert,et al. Comparing partitions , 1985 .
[5] Paul Geladi,et al. Principal Component Analysis , 1987, Comprehensive Chemometrics.
[6] Douglas A. Reynolds. Gaussian Mixture Models , 2009, Encyclopedia of Biometrics.
[7] Bo Wang,et al. Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning , 2016, Nature Methods.
[8] J. C. Love,et al. Seq-Well: A Portable, Low-Cost Platform for High-Throughput Single-Cell RNA-Seq of Low-Input Samples , 2017 .
[9] Joshua W. K. Ho,et al. CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq data , 2016, Genome Biology.
[10] J. Tenenbaum,et al. A global geometric framework for nonlinear dimensionality reduction. , 2000, Science.
[11] M. Hemberg,et al. Challenges in unsupervised clustering of single-cell RNA-seq data , 2019, Nature Reviews Genetics.
[12] Ulrike von Luxburg,et al. A tutorial on spectral clustering , 2007, Stat. Comput..
[13] Quan Zou,et al. Clustering and classification methods for single-cell RNA-sequencing data , 2020, Briefings Bioinform..
[14] Lu Yang,et al. SAIC: an iterative clustering approach for analysis of single cell RNA-seq data , 2017, BMC Genomics.
[15] Mauro J. Muraro,et al. De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data , 2016, Cell stem cell.
[16] Kui Wang,et al. Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis , 2020, Nature Communications.
[17] Hui Wang,et al. SINCERA: A Pipeline for Single-Cell RNA-Seq Profiling Analysis , 2015, PLoS Comput. Biol..
[18] Allon M. Klein,et al. Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells , 2015, Cell.
[19] Fabian J Theis,et al. Current best practices in single‐cell RNA‐seq analysis: a tutorial , 2019, Molecular systems biology.
[20] Yi Pan,et al. SinNLRR: a robust subspace clustering method for cell type detection by non-negative and low-rank representation , 2019, Bioinform..
[21] Hans Clevers,et al. Single-cell messenger RNA sequencing reveals rare intestinal cell types , 2015, Nature.