Plant Growth Promoting Endophytic Bacteria of Coffea canephora and Coffea arabica L. in UB Forest

Plant Growth Promoting (PGP) Endophytic bacteria are used as an alternative biofertilizer to support soil health and plant productivity. This research aimed to isolate, analyze the potential, and identify the endophytic bacteria of Robusta and Arabica coffee plants as biofertilizer agents. Endophytic bacteria were isolated from the roots of coffee plants and tested for their potential to produce IAA, phosphate-solubilizing, and nitrogen fixation. Potential endophytic bacterial isolates were identified based on 16S rDNA sequence similarity. Total isolates from Robusta coffee consisting of ten IAA-producing bacteria, eight phosphate-solubilizing, and seven nitrogen fixation bacteria isolates. Total isolates from Arabica coffee roots were 12 isolates of IAA-producing bacteria, seven isolates of phosphate-solubilizing bacteria, and six isolates of nitrogen fixation bacteria. The highest potential of the isolate from Robusta roots was SS.E2 isolate to produce IAA 110.73 μg.mL -1 ; SS.P3 isolate to dissolve phosphate 4.42 μg.mL -1 , and SS.N2 isolate to produce ammonium 3.15 μg.mL -1 . The highest potential of the isolate from Arabica roots was SW.E9 isolate to produce IAA up to 257.16 μg.mL -1 ; SW.P5 isolate to dissolve phosphate up to 4,55 μg.mL -1 ; and SW.N6 isolate to produce ammonium up to 1.16 μg.mL -1 . Isolates SS.E2, SW.E9, SS.P3, SW.P5, SS.N2, and SW.N6 were respectively identified as Bacillus cereus ATCC 14579, Bacillus cereus ATCC 14579, Rahnella aquatilis B35, Kluyvera intermedia TPY16, Rahnella aquatilis B35, and Pseudomonas tolaasii NCPPB 2192. Potential PGP isolates can be developed as biofertilizer agents for the coffee plant. Keywords: Coffee, Endophytic bacteria, IAA, Nitrogen, Phosphate

[1]  Cahyo Prayogo,et al.  DAMPAK PERUBAHAN PENGGUNAAN LAHAN DI UB FOREST TERHADAP KARBON BIOMASSA MIKROBA DAN TOTAL POPULASI BAKTERI , 2019 .

[2]  Amany M. Reyad,et al.  Improvement Salt Tolerance of Safflower Plants by Endophytic Bacteria , 2019, Journal of Horticulture and Plant Research.

[3]  Suharjono,et al.  Plant growth-promoting properties of free-living diazotrophic rhizobacteria from Tangerine (Citrus reticulate L.) var Batu 55 , 2018, Malaysian Journal of Microbiology.

[4]  Shilin Chen,et al.  Diversity and composition of bacterial endophytes among plant parts of Panax notoginseng , 2018, Chinese Medicine.

[5]  Imran Afzal,et al.  Plant growth-promoting potential of endophytic bacteria isolated from roots of wild Dodonaea viscosa L. , 2016, Plant Growth Regulation.

[6]  G. Mugnozza,et al.  An In vitro Study of Bio-Control and Plant Growth Promotion Potential of Salicaceae Endophytes , 2017, Front. Microbiol..

[7]  S. Chaphalkar,et al.  Phylogenetic Analysis of Endophytic Bacteria from Nakshtra Trees , 2016 .

[8]  M. Oves,et al.  Cellulosimicrobium funkei-like enhances the growth of Phaseolus vulgaris by modulating oxidative damage under Chromium(VI) toxicity , 2016, Journal of advanced research.

[9]  Y. Kuzyakov,et al.  Sensitivity and resistance of soil fertility indicators to land-use changes: New concept and examples from conversion of Indonesian rainforest to plantations , 2016 .

[10]  In-Jung Lee,et al.  Indole acetic acid and ACC deaminase from endophytic bacteria improves the growth of Solanum lycopersicum , 2016 .

[11]  Akshit Puri,et al.  Seedling growth promotion and nitrogen fixation by a bacterial endophyte Paenibacillus polymyxa P2b-2R and its GFP derivative in corn in a long-term trial , 2016, Symbiosis.

[12]  G. Berg,et al.  The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes , 2015, Microbiology and Molecular Reviews.

[13]  J. Azevedo,et al.  Phylogenetic analysis of endophytic bacterial isolates from leaves of the medicinal plant Trichilia elegans A. Juss. (Meliaceae). , 2015, Genetics and molecular research : GMR.

[14]  B. Glick Bacteria with ACC deaminase can promote plant growth and help to feed the world. , 2014, Microbiological research.

[15]  In-Jung Lee,et al.  Fungal endophyte Penicillium janthinellum LK5 improves growth of ABA-deficient tomato under salinity , 2013, World Journal of Microbiology and Biotechnology.

[16]  M. S. Anzuay,et al.  Genetic diversity of phosphate-solubilizing peanut (Arachis hypogaea L.) associated bacteria and mechanisms involved in this ability , 2013, Symbiosis.

[17]  I. C. Paz,et al.  Eucalyptus growth promotion by endophytic Bacillus spp. , 2012, Genetics and molecular research : GMR.

[18]  Trevor C. Charles,et al.  Isolation and characterization of new plant growth-promoting bacterial endophytes , 2012 .

[19]  M. Saraf,et al.  Stimulation of the growth of Jatropha curcas by the plant growth promoting bacterium Enterobacter cancerogenus MSA2 , 2012, World journal of microbiology & biotechnology.

[20]  G. Wei,et al.  Identification and characterization of the endophytic plant growth prompter Bacillus Cereus strain mq23 isolated from Sophora Alopecuroides root nodules , 2011, Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology].

[21]  P. Brookes,et al.  Measuring soil microbial biomass using an automated procedure , 2011 .

[22]  A. Gulati,et al.  Organic acid production in vitro and plant growth promotion in maize under controlled environment by phosphate-solubilizing fluorescent Pseudomonas , 2009, BMC Microbiology.

[23]  S. Doty,et al.  Characterization of bacterial endophytes of sweet potato plants , 2009, Plant and Soil.

[24]  J. Buyer,et al.  Endophytic bacteria in Coffea arabica L. , 2005, Journal of basic microbiology.

[25]  A. Khalid,et al.  Screening plant growth‐promoting rhizobacteria for improving growth and yield of wheat , 2004, Journal of applied microbiology.

[26]  Philippe Montavon,et al.  Evolution of green coffee protein profiles with maturation and relationship to coffee cup quality. , 2003, Journal of agricultural and food chemistry.

[27]  H. Krishnan,et al.  Rahnella aquatilis, a bacterium isolated from soybean rhizosphere, can solubilize hydroxyapatite , 1997 .

[28]  G. Mihalache,et al.  PHOSPHATE-SOLUBILIZING BACTERIA ASSOCIATED WITH RUNNER BEAN RHIZOSPHERE , 2015 .

[29]  K. Sabally,et al.  Determination of Chlorogenic Acids (CGA) in Coffee Beans using HPLC , 2013 .

[30]  S. Lumyong,et al.  Screening and Optimization of Indole-3-Acetic Acid Production and Phosphate Solubilization from Rhizobacteria Aimed at Improving Plant Growth , 2010, Current Microbiology.

[31]  S. Hernández-Sotomayor,et al.  Coffee biotechnology , 2006 .