Discovery Radiomics for Computed Tomography Cancer Detection

Objective: Lung cancer is the leading cause for cancer related deaths. As such, there is an urgent need for a streamlined process that can allow radiologists to provide diagnosis with greater efficiency and accuracy. A powerful tool to do this is radiomics. Method: In this study, we take the idea of radiomics one step further by introducing the concept of discovery radiomics for lung cancer detection using CT imaging data. Rather than using pre-defined, hand-engineered feature models as with current radiomics-driven methods, we discover custom radiomic sequencers that can generate radiomic sequences consisting of abstract imaging-based features tailored for characterizing lung tumour phenotype. In this study, we realize these custom radiomic sequencers as deep convolutional sequencers using a deep convolutional neural network learning architecture based on a wealth of CT imaging data. Results: To illustrate the prognostic power and effectiveness of the radiomic sequences produced by the discovered sequencer, we perform a classification between malignant and benign lesions from 93 patients with diagnostic data from the LIDC-IDRI dataset. Using the clinically provided diagnostic data as ground truth, proposed framework provided an average accuracy of 77.52% via 10-fold cross-validation with a sensitivity of 79.06% and specificity of 76.11%. We also perform quantitative analysis to establish the effectiveness of the radiomics sequences. Conclusion: The proposed framework outperforms the state-of-the art approach for lung lesion classification. Significance: These results illustrate the potential for the proposed discovery radiomics approach in aiding radiologists in improving screening efficiency and accuracy.

[1]  Ronald M. Summers,et al.  Deep convolutional networks for pancreas segmentation in CT imaging , 2015, Medical Imaging.

[2]  Ronald M. Summers,et al.  Improving Computer-Aided Detection Using Convolutional Neural Networks and Random View Aggregation , 2015, IEEE Transactions on Medical Imaging.

[3]  Yoshua Bengio,et al.  Convolutional networks for images, speech, and time series , 1998 .

[4]  Kunio Doi,et al.  Computer-aided Detection of Peripheral Lung Cancers Missed at CT : ROC Analyses without and with Localization 1 , 2005 .

[5]  Anthony J. Sherbondy,et al.  Pulmonary nodules on multi-detector row CT scans: performance comparison of radiologists and computer-aided detection. , 2005, Radiology.

[6]  Wei Shen,et al.  Multi-scale Convolutional Neural Networks for Lung Nodule Classification , 2015, IPMI.

[7]  P. Lambin,et al.  Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach , 2014, Nature Communications.

[8]  Arjan Bel,et al.  Definition of gross tumor volume in lung cancer: inter-observer variability. , 2002, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[9]  L. Broemeling,et al.  Interobserver and intraobserver variability in measurement of non-small-cell carcinoma lung lesions: implications for assessment of tumor response. , 2003, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[10]  Richard C. Pais,et al.  The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): a completed reference database of lung nodules on CT scans. , 2011, Medical physics.

[11]  K. Gunavathi,et al.  Lung cancer classification using neural networks for CT images , 2014, Comput. Methods Programs Biomed..

[12]  Jacob D. Furst,et al.  Probabilistic lung nodule classification with belief decision trees , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[13]  André Stumpf,et al.  An Empirical Study Into Annotator Agreement, Ground Truth Estimation, and Algorithm Evaluation , 2013, IEEE Transactions on Image Processing.

[14]  E. Hoffman,et al.  Lung image database consortium: developing a resource for the medical imaging research community. , 2004, Radiology.

[15]  Vianey Guadalupe Cruz Sanchez,et al.  Automated system for lung nodules classification based on wavelet feature descriptor and support vector machine , 2015, BioMedical Engineering OnLine.

[16]  Ronald M. Summers,et al.  Anatomy-specific classification of medical images using deep convolutional nets , 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI).

[17]  Andrea Vedaldi,et al.  MatConvNet: Convolutional Neural Networks for MATLAB , 2014, ACM Multimedia.

[18]  Patrick Granton,et al.  Radiomics: extracting more information from medical images using advanced feature analysis. , 2012, European journal of cancer.

[19]  Alexander Wong,et al.  Lung Nodule Classification Using Deep Features in CT Images , 2015, 2015 12th Conference on Computer and Robot Vision.