Antimicrobial resistance profile of bacterial pathogens isolated from naturally infected fish in some lakes of Ethiopia

Small scale fisheries play important role in providing food and livelihoods for households in Ethiopia. However, prevalence of bacterial fish infection and their antimicrobial resistance are increasing over the world accounting for the major limitations in fish productionas well asits consumption. A cross sectional study was carried out to identify bacterial pathogens isolated from naturally infectedNile tilapia (Oreochromis niloticus) and 20 were common carp (Cyprinus carpio)fish showing clinical signs of disease particularly hemorrhage and skin ulceration and to determine the antibiotic susceptibility of fish associated bacteria in Ethiopia. A total of 42 fish samples from two lakes (Hawassa and Ziway) were aseptically collected and bacteria were isolated from the kidney, liver and intestine. The isolates were identified by their morphological characteristics, biochemical tests and sequencing of 16S rRNA genes. Nine well known fish pathogens were identified from 49 positive samples at the lakes with prevalence rate of Aeromonasveronii(21.43%), Proteusmirabilis (19.05%), Edwardsiella tarda (16.67%), Shigella flexneri(11.9%), Stenotrophomonas maltophilia (11.9%), Aeromonas hydrophila (11.9 %),Pseudomonas putida (9.5%), Aeromonassobria (7.14%) and Pseudomonas hunanensis (7.14%).Of these pathogens, six (6) mostprevalent andknown potential pathogens (A. hydrophila, A. veronii, E. tarda, P. mirabilis, S. flexneri and S. maltophilia)were evaluated for antibiotic susceptibility by using Kirby Bauer disk diffusion assay. All the isolates tested were resistant to at least three (3) of the eight antibiotics evaluated. High levels of resistance were expressed by the majority (87.5%) of the pathogens against penicillin and vancomycin. The results indicate the presence of potential pathogens andmaximum levels of acquired antibiotic resistance in fish bacteria from the study area. Thus, theuse of antibiotic in fish farming in Ethiopia should be discouraged.It isalso advisable to cook fish properly before consumption, in order to kill bacterialpathogens that may be present.

[1]  I. Gardner,et al.  Antimicrobial Susceptibility Profiles of Bacteria Commonly Isolated from Farmed Salmonids in Atlantic Canada (2000–2021) , 2022, Veterinary sciences.

[2]  Z. Zakaria,et al.  Prevalence and Antimicrobial Resistance of Escherichia coli, Salmonella and Vibrio Derived from Farm-Raised Red Hybrid Tilapia (Oreochromis spp.) and Asian Sea Bass (Lates calcarifer, Bloch 1970) on the West Coast of Peninsular Malaysia , 2022, Antibiotics.

[3]  Hala F. Ayoub et al.,et al.  Isolation, Identification and Antimicrobial profile of Aeromonas spp., Pseudomonas spp. and Vibrio spp. from the Nile Tilapia, Oreochromis niloticus in fish farms , 2021 .

[4]  C. Matchawe,et al.  Microbial Assessment and Antibiotic Susceptibility Profile of Bacterial Fish Isolates in an Aquaculture Production Site in Mefou Afamba Division of Cameroon , 2021, Journal of Environmental Science and Engineering B.

[5]  I. Karunasagar,et al.  Contact-Zoonotic Bacteria of Warmwater Ornamental and Cultured Fish , 2020, Asian Fisheries Science.

[6]  Laila,et al.  Isolation, Identification, and Antimicrobial Profiling of Bacteria from Aquaculture Fishes in Pond Water of Bangladesh , 2020, American Journal of Pure and Applied Biosciences.

[7]  D. Tchernov,et al.  Specific pathogens and microbial abundance within liver and kidney tissues of wild marine fish from the Eastern Mediterranean Sea , 2020, Microbial biotechnology.

[8]  C. Gufe,et al.  Antimicrobial Profiling of Bacteria Isolated from Fish Sold at Informal Market in Mufakose, Zimbabwe , 2019, International journal of microbiology.

[9]  Ø. Evensen,et al.  Occurrence and antibiotic susceptibility of fish bacteria isolated from Oreochromis niloticus (Nile tilapia) and Clarias gariepinus (African catfish) in Uganda , 2018 .

[10]  Agnieszka Pękala-Safińska,et al.  Contemporary Threats of Bacterial Infections in Freshwater Fish , 2018, Journal of veterinary research.

[11]  F. Ramos,et al.  Antimicrobial resistance in aquaculture: Current knowledge and alternatives to tackle the problem. , 2018, International journal of antimicrobial agents.

[12]  H. Harbottle,et al.  Antimicrobial Drug Resistance in Fish Pathogens. , 2018, Microbiology spectrum.

[13]  E. E. Agoba,et al.  Antibiotic resistance patterns of bacterial isolates from hatcheries and selected fish farms in the Ashanti region of Ghana , 2017 .

[14]  P. Gatta state of world fisheries and aquaculture , 2017 .

[15]  M. El‐Barbary,et al.  Isolation and molecular characterization of some bacterial pathogens in El-Serw fish farm, Egypt , 2016 .

[16]  F. Baquero,et al.  The global threat of antimicrobial resistance: science for intervention , 2015, New microbes and new infections.

[17]  Hai-Hua Wang,et al.  Pseudomonas hunanensis sp. nov., Isolated from Soil Subjected to Long-Term Manganese Pollution , 2014, Current Microbiology.

[18]  H. Bürgmann,et al.  A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota , 2013, Front. Microbiol..

[19]  Jan Hudzicki,et al.  Kirby-Bauer Disk Diffusion Susceptibility Test Protocol , 2009 .

[20]  M. C. Leal,et al.  Histological and Stereological Evaluation of Zebrafish (Danio rerio) Spermatogenesis with an Emphasis on Spermatogonial Generations1 , 2009, Biology of reproduction.

[21]  M. C. Balebona,et al.  Bacteria recovered from diseased cultured gilthead sea bream (Sparus aurata L.) in southwestern Spain , 2003 .

[22]  B. Austin,et al.  Bacterial fish pathogens: disease in farmed and wild fish. , 1999 .

[23]  W. W. Daniel,et al.  Biostatistics: A Foundation for Analysis in the Health Sciences, 5th Edition. , 1991 .

[24]  S. Goodison,et al.  16S ribosomal DNA amplification for phylogenetic study , 1991, Journal of bacteriology.

[25]  G. Hong,et al.  Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[26]  D. Weinman,et al.  Tuberculosis in White and Negro Children , 1959, Pediatrics.

[27]  J. Brown Bergey's Manual of Determinative Bacteriology (5th ed.) , 1939 .

[28]  A. Mohammed,et al.  Molecular characterization of Aeromonas hydrophila isolates from diseased fishes in district Kasur, Punjab, Pakistan. , 2022, Brazilian journal of biology = Revista brasleira de biologia.

[29]  G. Nakazato,et al.  Antimicrobials and resistant bacteria in global fish farming and the possible risk for public health , 2020 .

[30]  A. Nuru,et al.  Edwardsiella Species Infection in Fish Population and Its Status in Ethiopia , 2019, Fisheries and Aquaculture Journal.

[31]  R. Musselman Sampling procedure for lake or stream surface water chemistry , 2012 .

[32]  M. Ferraro Performance standards for antimicrobial susceptibility testing , 2001 .

[33]  E. Yimer Preliminary survey of parasites and bacterial pathogens of fish at Lake Ziway , 2000 .

[34]  S. T. Cowan Bergey's Manual of Determinative Bacteriology , 1948, Nature.