Centrality Analysis Methods for Biological Networks and Their Application to Gene Regulatory Networks
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[1] Leo Katz,et al. A new status index derived from sociometric analysis , 1953 .
[2] Leonard M. Freeman,et al. A set of measures of centrality based upon betweenness , 1977 .
[3] L. Freeman. Centrality in social networks conceptual clarification , 1978 .
[4] Edda Klipp,et al. Systems Biology , 1994 .
[5] T. Valente,et al. Integration and radiality: Measuring the extent of an individual's connectedness and reachability in a network , 1998 .
[6] Rajeev Motwani,et al. The PageRank Citation Ranking : Bringing Order to the Web , 1999, WWW 1999.
[7] D. Fell,et al. The small world of metabolism , 2000, Nature Biotechnology.
[8] A. Barabasi,et al. Lethality and centrality in protein networks , 2001, Nature.
[9] S. Shen-Orr,et al. Network motifs in the transcriptional regulation network of Escherichia coli , 2002, Nature Genetics.
[10] Albert-László Barabási,et al. Systems biology. Life's complexity pyramid. , 2002, Science.
[11] Nicola J. Rinaldi,et al. Transcriptional Regulatory Networks in Saccharomyces cerevisiae , 2002, Science.
[12] S. Shen-Orr,et al. Network motifs: simple building blocks of complex networks. , 2002, Science.
[13] H. Kitano. Systems Biology: A Brief Overview , 2002, Science.
[14] Stefan Wuchty,et al. Interaction and domain networks of yeast , 2002, Proteomics.
[15] Albert-László Barabási,et al. Life's Complexity Pyramid , 2002, Science.
[16] S. Mangan,et al. Structure and function of the feed-forward loop network motif , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[17] An-Ping Zeng,et al. The Connectivity Structure, Giant Strong Component and Centrality of Metabolic Networks , 2003, Bioinform..
[18] J. Collado-Vides,et al. Identifying global regulators in transcriptional regulatory networks in bacteria. , 2003, Current opinion in microbiology.
[19] Matthew W. Hahn,et al. Molecular Evolution in Large Genetic Networks: Does Connectivity Equal Constraint? , 2004, Journal of Molecular Evolution.
[20] S. Mangan,et al. The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks. , 2003, Journal of molecular biology.
[21] P. Stadler,et al. Centers of complex networks. , 2003, Journal of theoretical biology.
[22] Falk Schreiber,et al. Comparison of Centralities for Biological Networks , 2004, German Conference on Bioinformatics.
[23] E. Wingender,et al. Topology of mammalian transcription networks. , 2005, Genome informatics. International Conference on Genome Informatics.
[24] D. Ingber,et al. High-Betweenness Proteins in the Yeast Protein Interaction Network , 2005, Journal of biomedicine & biotechnology.
[25] Matthew W. Hahn,et al. Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks. , 2005, Molecular biology and evolution.
[26] Mary J Dunlop,et al. Multiple functions of a feed-forward-loop gene circuit. , 2005, Journal of molecular biology.
[27] Edwin Wang,et al. Self-organization of gene regulatory network motifs enriched with short transcript's half-life transcription factors , 2005, q-bio/0504025.
[28] Julio Collado-Vides,et al. RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions , 2005, Nucleic Acids Res..
[29] Falk Schreiber,et al. Ranking of network elements based on functional substructures. , 2007, Journal of theoretical biology.
[30] Q. Cui,et al. Regulatory network motifs and hotspots of cancer genes in a mammalian cellular signalling network. , 2007, IET systems biology.
[31] Falk Schreiber,et al. Analysis of Biological Networks , 2008 .
[32] Rainer Breitling,et al. What is Systems Biology? , 2010, Front. Physiology.
[33] Gene Regulation and Systems Biology , 2022 .