The UCSC Genome Browser database: 2018 update
暂无分享,去创建一个
David Haussler | Brian J. Raney | Joel Armstrong | David Gibson | Cath Tyner | Galt P. Barber | Jonathan Casper | Hiram Clawson | Mark Diekhans | Christopher Eisenhart | Jairo Navarro Gonzalez | Luvina Guruvadoo | Maximilian Haeussler | Angie S. Hinrichs | Donna Karolchik | Brian T. Lee | Christopher M. Lee | Kate R. Rosenbloom | Matthew L. Speir | Chris Villarreal | Ann S. Zweig | W. James Kent | Robert M. Kuhn | Ian T. Fiddes | D. Haussler | M. Diekhans | W. J. Kent | K. Rosenbloom | H. Clawson | A. Hinrichs | A. Zweig | G. Barber | R. Kuhn | D. Karolchik | B. Raney | J. Armstrong | M. Haeussler | M. Speir | L. Guruvadoo | Christopher Eisenhart | J. Casper | Cath Tyner | David Gibson | C. Villarreal | W. Kent
[1] Karin Breuer,et al. InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation , 2012, Nucleic Acids Res..
[2] Dmitrij Frishman,et al. Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis , 2013, Nucleic Acids Res..
[3] Kara Dolinski,et al. The BioGRID interaction database: 2017 update , 2016, Nucleic Acids Res..
[4] Sangsu Bae,et al. Microhomology-based choice of Cas9 nuclease target sites , 2014, Nature Methods.
[5] Henning Hermjakob,et al. The Reactome pathway knowledgebase , 2013, Nucleic Acids Res..
[6] Hoifung Poon,et al. Literome: PubMed-scale genomic knowledge base in the cloud , 2014, Bioinform..
[7] Ting Wang,et al. methylC Track: visual integration of single-base resolution DNA methylation data on the WashU EpiGenome Browser , 2014, Bioinform..
[8] Ting Wang,et al. Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser , 2013, Bioinform..
[9] David Haussler,et al. Navigating protected genomics data with UCSC Genome Browser in a Box , 2014, Bioinform..
[10] Adam J. Smith,et al. The Database of Interacting Proteins: 2004 update , 2004, Nucleic Acids Res..
[11] Juancarlos Chan,et al. Gene Ontology Consortium: going forward , 2014, Nucleic Acids Res..
[12] Sylvie Ricard-Blum,et al. MatrixDB, the extracellular matrix interaction database: updated content, a new navigator and expanded functionalities , 2014, Nucleic Acids Res..
[13] Hiroyuki Ogata,et al. KEGG: Kyoto Encyclopedia of Genes and Genomes , 1999, Nucleic Acids Res..
[14] Damian Szklarczyk,et al. STRING v9.1: protein-protein interaction networks, with increased coverage and integration , 2012, Nucleic Acids Res..
[15] David Haussler,et al. The UCSC Genome Browser database: 2017 update , 2016, Nucleic Acids Res..
[16] David Haussler,et al. UCSC Data Integrator and Variant Annotation Integrator , 2016, Bioinform..
[17] Tim J. P. Hubbard,et al. Dalliance: interactive genome viewing on the web , 2011, Bioinform..
[18] Meagan E. Sullender,et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9 , 2015, Nature Biotechnology.
[19] Bertram Klinger,et al. Computer-assisted curation of a human regulatory core network from the biological literature , 2015, Bioinform..
[20] Rafael C. Jimenez,et al. The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases , 2013, Nucleic Acids Res..
[21] Kenneth H. Buetow,et al. PID: the Pathway Interaction Database , 2008, Nucleic Acids Res..
[22] Damian Szklarczyk,et al. The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible , 2016, Nucleic Acids Res..
[23] Peter Uetz,et al. MPIDB: the microbial protein interaction database , 2008, Bioinform..
[24] Igor Jurisica,et al. Online Predicted Human Interaction Database , 2005, Bioinform..
[25] Ioannis Xenarios,et al. DIP: The Database of Interacting Proteins: 2001 update , 2001, Nucleic Acids Res..
[26] Minoru Kanehisa,et al. KEGG as a reference resource for gene and protein annotation , 2015, Nucleic Acids Res..
[27] Hans-Werner Mewes,et al. MPact: the MIPS protein interaction resource on yeast , 2005, Nucleic Acids Res..
[28] Ian M. Donaldson,et al. BIND: the Biomolecular Interaction Network Database , 2001, Nucleic Acids Res..
[29] Chris T. A. Evelo,et al. WikiPathways: building research communities on biological pathways , 2011, Nucleic Acids Res..
[30] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[31] Wen J. Li,et al. Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation , 2015, Nucleic Acids Res..
[32] Sandhya Rani,et al. Human Protein Reference Database—2009 update , 2008, Nucleic Acids Res..
[33] Ellen T. Gelfand,et al. The Genotype-Tissue Expression (GTEx) project , 2013, Nature Genetics.
[34] J. Kent,et al. Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR , 2016, Genome Biology.
[35] Dmitrij Frishman,et al. The MIPS mammalian protein?Cprotein interaction database , 2005, Bioinform..
[36] Hans-Werner Mewes,et al. CORUM: the comprehensive resource of mammalian protein complexes , 2007, Nucleic Acids Res..
[37] Raymond Dalgleish,et al. HGVS Recommendations for the Description of Sequence Variants: 2016 Update , 2016, Human mutation.
[38] W. J. Kent,et al. BLAT--the BLAST-like alignment tool. , 2002, Genome research.
[39] Ryan Miller,et al. WikiPathways: capturing the full diversity of pathway knowledge , 2015, Nucleic Acids Res..
[40] Minoru Kanehisa,et al. KEGG: new perspectives on genomes, pathways, diseases and drugs , 2016, Nucleic Acids Res..
[41] Ian M. Donaldson,et al. The Biomolecular Interaction Network Database and related tools 2005 update , 2004, Nucleic Acids Res..
[42] Charles E. Vejnar,et al. CRISPRscan: designing highly efficient sgRNAs for CRISPR/Cas9 targeting in vivo , 2015, Nature Methods.
[43] Livia Perfetto,et al. MINT, the molecular interaction database: 2012 update , 2011, Nucleic Acids Res..
[44] Mei Jiang,et al. Androgen-responsive gene database: integrated knowledge on androgen-responsive genes. , 2009, Molecular endocrinology.