Secondary flow as a mechanism for the formation of biofilm streamers.

In most environments, such as natural aquatic systems, bacteria are found predominantly in self-organized sessile communities known as biofilms. In the presence of a significant flow, mature multispecies biofilms often develop into long filamentous structures called streamers, which can greatly influence ecosystem processes by increasing transient storage and cycling of nutrients. However, the interplay between hydrodynamic stresses and streamer formation is still unclear. Here, we show that suspended thread-like biofilms steadily develop in zigzag microchannels with different radii of curvature. Numerical simulations of a low-Reynolds-number flow around these corners indicate the presence of a secondary vortical motion whose intensity is related to the bending angle of the turn. We demonstrate that the formation of streamers is directly proportional to the intensity of the secondary flow around the corners. In addition, we show that a model of an elastic filament in a two-dimensional corner flow is able to explain how the streamers can cross fluid streamlines and connect corners located at the opposite sides of the channel.

[1]  T. Balsa Secondary flow in a Hele-Shaw cell , 1998, Journal of Fluid Mechanics.

[2]  T. Nakagawa,et al.  Molecular Characterization of Community Structures and Sulfur Metabolism within Microbial Streamers in Japanese Hot Springs , 2003, Applied and Environmental Microbiology.

[3]  C. Laspidou,et al.  On the calculation of the elastic modulus of a biofilm streamer. , 2008, Biotechnology and bioengineering.

[4]  M. Parsek,et al.  Bacterial biofilms: an emerging link to disease pathogenesis. , 2003, Annual review of microbiology.

[5]  J. Block,et al.  Effect of wall shear rate on biofilm deposition and grazing in drinking water flow chambers , 2007, Biotechnology and bioengineering.

[6]  M. V. van Loosdrecht,et al.  Impact of flow regime on pressure drop increase and biomass accumulation and morphology in membrane systems. , 2010, Water research.

[7]  Z Lewandowski,et al.  Oscillation characteristics of biofilm streamers in turbulent flowing water as related to drag and pressure drop. , 1998, Biotechnology and bioengineering.

[8]  Cory J. Rupp,et al.  Commonality of elastic relaxation times in biofilms. , 2004, Physical review letters.

[9]  Z Lewandowski,et al.  Structural deformation of bacterial biofilms caused by short-term fluctuations in fluid shear: an in situ investigation of biofilm rheology. , 1999, Biotechnology and bioengineering.

[10]  J. Costerton,et al.  Influence of Hydrodynamics and Cell Signaling on the Structure and Behavior of Pseudomonas aeruginosa Biofilms , 2002, Applied and Environmental Microbiology.

[11]  R. Martinuzzi,et al.  Staphylococcus aureus biofilm formation and tolerance to antibiotics in response to oscillatory shear stresses of physiological levels. , 2010, FEMS immunology and medical microbiology.

[12]  D. Moreira,et al.  Macrofilamentous microbial communities in the metal-rich and acidic River Tinto, Spain. , 2004, FEMS microbiology letters.

[13]  Architectural differentiation reflects bacterial community structure in stream biofilms , 2009, The ISME Journal.

[14]  S. Kjelleberg,et al.  Microbial landscapes: new paths to biofilm research. , 2007, Nature reviews. Microbiology.

[15]  S. Wuertz,et al.  Effect of flow regime on the architecture of a Pseudomonas fluorescens biofilm. , 2002, Biotechnology and bioengineering.

[16]  H. Flemming,et al.  Biofouling in water systems – cases, causes and countermeasures , 2002, Applied Microbiology and Biotechnology.

[17]  S. Kimura,et al.  Macroscopic Streamer Growths in Acidic, Metal-Rich Mine Waters in North Wales Consist of Novel and Remarkably Simple Bacterial Communities , 2006, Applied and Environmental Microbiology.

[18]  H. Lappin-Scott,et al.  Quantification of the effect of flowrate on the rates of arrival and attachment to glass of Pseudomonas aeruginosa , 2006, Biofouling.

[19]  W. H. Reid,et al.  The Theory of Elasticity , 1960 .

[20]  R. Dickinson,et al.  Analysis of shear-dependent bacterial adhesion kinetics to biomaterial surfaces , 1995 .

[21]  Frederick M. Ausubel,et al.  Pseudomonas biofilm formation and antibiotic resistance are linked to phenotypic variation , 2002, Nature.

[22]  Cory J. Rupp,et al.  Viscoelastic fluid description of bacterial biofilm material properties. , 2002, Biotechnology and bioengineering.

[23]  W. Zimmerli,et al.  Prosthetic-joint infections. , 2004, The New England journal of medicine.

[24]  S. Pointing,et al.  The effects of temperature, pH and sulphide on the community structure of hyperthermophilic streamers in hot springs of northern Thailand. , 2007, FEMS microbiology ecology.

[25]  W. Dunne,et al.  Bacterial Adhesion: Seen Any Good Biofilms Lately? , 2002, Clinical Microbiology Reviews.

[26]  R. Townsin The Ship Hull Fouling Penalty , 2003, Biofouling.

[27]  Laura Guglielmini,et al.  Laminar flow around corners triggers the formation of biofilm streamers , 2010, Journal of The Royal Society Interface.

[28]  S. Timoshenko,et al.  Theory of elasticity , 1975 .

[29]  Paul Stoodley,et al.  Bacterial biofilms: from the Natural environment to infectious diseases , 2004, Nature Reviews Microbiology.

[30]  J. Lawrence,et al.  Novel sulfur-oxidizing streamers thriving in perennial cold saline springs of the Canadian high Arctic. , 2009, Environmental microbiology.

[31]  J. Newbold,et al.  Contributions of microbial biofilms to ecosystem processes in stream mesocosms , 2003, Nature.

[32]  H. Stone,et al.  Three-dimensional features in low-Reynolds-number confined corner flows , 2010, Journal of Fluid Mechanics.

[33]  Alison M. Forsyth,et al.  Shear stress increases the residence time of adhesion of Pseudomonas aeruginosa. , 2011, Biophysical journal.

[34]  G. Whitesides,et al.  Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane). , 1998, Analytical chemistry.

[35]  P Stoodley,et al.  Applying the digital image correlation method to estimate the mechanical properties of bacterial biofilms subjected to a wall shear stress , 2009, Biofouling.

[36]  R. G. Cox The motion of long slender bodies in a viscous fluid Part 1. General theory , 1970, Journal of Fluid Mechanics.

[37]  M. V. van Loosdrecht,et al.  Biofouling of spiral-wound nanofiltration and reverse osmosis membranes: a feed spacer problem. , 2009, Water research.

[38]  J. Younger,et al.  Flexible microfluidic device for mechanical property characterization of soft viscoelastic solids such as bacterial biofilms. , 2009, Langmuir : the ACS journal of surfaces and colloids.

[39]  G. O’Toole,et al.  Mechanisms of biofilm resistance to antimicrobial agents. , 2001, Trends in microbiology.

[40]  T. Battin,et al.  Biophysical Controls on Community Succession in Stream Biofilms , 2007, Applied and Environmental Microbiology.

[41]  Holger Daims,et al.  Drivers of bacterial colonization patterns in stream biofilms. , 2010, FEMS microbiology ecology.