Chemical and biochemical sensing applications of microstructured optical fiber‐based systems

This paper provides an up-to-date overview on the use of microstructured optical fibers (MOFs) in chemical sensing during the last ten years, more specifically, applications in liquid media including the use of solid-core photonic crystal fibers, hollow-core PCFs and other MOFs and related microstructures. To this aim, a classification of different types of fiber-based chemical sensors is first made, followed by a description of the most important MOFs and their operation principles in chemical sensing. Then, studies on the use of MOFs in fluorescence, Raman and SERS detection among other detection principles are discussed. Finally, literature including the implementation of these microstructures in home-made and commercial analytical equipment is summarized. This review intends not only to give a current perspective on the use of MOFs and microstructures in chemical sensing, but also to make an approach between the fields of optical fiber and analytical chemistry, in order to understand the basic principles of operation in this promising frontier of knowledge.

[1]  John Canning,et al.  Water-soluble porphyrin detection in a pure-silica photonic crystal fiber. , 2006, Optics letters.

[2]  Zhiyi Zhang,et al.  Monitoring changes in the refractive index of gases by means of a fiber optic Fabry-Perot interferometer sensor , 2005 .

[3]  Lalitkumar Bansal,et al.  Fiber Optic Sensors for Detection of Toxic and Biological Threats , 2007, Sensors.

[4]  M. Mansuripur,et al.  Evanescent field-based optical fiber sensing device for measuring the refractive index of liquids in microfluidic channels. , 2005, Optics letters.

[5]  D. M. Atkin,et al.  All-silica single-mode optical fiber with photonic crystal cladding. , 1996, Optics letters.

[6]  Thomas Lake,et al.  Whispering Gallery Modes in Standard Optical Fibres for Fibre Profiling Measurements and Sensing of Unlabelled Chemical Species , 2010, Sensors.

[7]  D. Webb,et al.  Humidity insensitive TOPAS polymer fiber Bragg grating sensor. , 2011, Optics express.

[8]  Jens Kobelke,et al.  Laser-drilled free-form silica fiber preforms for microstructured optical fibers , 2013 .

[9]  S. Mukherji,et al.  Novel U-bent fiber optic probe for localized surface plasmon resonance based biosensor. , 2009, Biosensors & bioelectronics.

[10]  Xudong Fan,et al.  Optofluidic Microsystems for Chemical and Biological Analysis. , 2011, Nature photonics.

[11]  M A Schmidt,et al.  Reflectivity enhanced refractive index sensor based on a fiber-integrated Fabry-Perot microresonator. , 2014, Optics express.

[12]  Ole Bang,et al.  Selective Serial Multi-Antibody Biosensing with TOPAS Microstructured Polymer Optical Fibers , 2013, Sensors (Basel, Switzerland).

[13]  D. Richardson,et al.  Developing holey fibres for evanescent field devices , 1999 .

[14]  R. Lindquist,et al.  A reflection-based localized surface plasmon resonance fiber-optic probe for biochemical sensing , 2011, Biomedical optics express.

[15]  Tanya M. Monro,et al.  Explosives detection by fluorescence quenching of conjugated polymers in suspended core optical fibers , 2014 .

[16]  Hai Ming,et al.  Broad spectral photonic crystal fiber surface enhanced Raman scattering probe , 2009 .

[17]  Christos Markos,et al.  Label-free biosensing with high sensitivity in dual-core microstructured polymer optical fibers. , 2011, Optics express.

[18]  Peter Uhd Jepsen,et al.  Bendable, low-loss Topas fibers for the terahertz frequency range. , 2009, Optics express.

[19]  N. Ngo,et al.  Evanescent Field Absorption Sensor Using a Pure-Silica Defected-Core Photonic Crystal Fiber , 2008, IEEE Photonics Technology Letters.

[20]  J. Wuenschell,et al.  Blue-shift of surface plasmon resonance in a metal nanoslit array structure. , 2009, Optics express.

[21]  Ole Bang,et al.  Microstructured optical fiber refractive index sensor. , 2010, Optics letters.

[22]  Ying Lu,et al.  Surface Plasmon Resonance Sensor Based on Polymer Photonic Crystal Fibers with Metal Nanolayers , 2013, Sensors.

[23]  P. Wei,et al.  Sensitive liquid refractive index sensors using tapered optical fiber tips. , 2010, Optics letters.

[24]  Knight,et al.  Single-Mode Photonic Band Gap Guidance of Light in Air. , 1999, Science.

[25]  Henry Du,et al.  Solid-core photonic crystal fiber as a Raman spectroscopy platform with a silica core as an internal reference. , 2006, Optics letters.

[26]  Tanya M. Monro,et al.  Sensing in suspended-core optical fibers , 2011, IEEE Winter Topicals 2011.

[27]  Eyal Preter,et al.  Monitoring and analysis of pendant droplets evaporation using bare and monolayer-coated optical fiber facets , 2014 .

[28]  Tanya M. Monro,et al.  Silica exposed-core microstructured optical fibers , 2012 .

[29]  Haosu Luo,et al.  Strain-mediated electric-field control of resistance in the La[sub 0.85]Sr[sub 0.15]MnO₃/0.7Pb(Mg[sub ⅓]Nb[sub ⅔])O₃-0.3PbTiO₃ structure , 2007 .

[30]  Qingping Yang,et al.  DP flow sensor using optical fibre Bragg grating , 2001 .

[31]  M. González-Herráez,et al.  A microstructured capillary electrophoresis method for nitrocellulose detection in dynamite , 2015 .

[32]  Federico Capasso,et al.  Patterning the tips of optical fibers with metallic nanostructures using nanoskiving. , 2011, Nano letters.

[33]  S. Sukhishvili,et al.  Forward-propagating surface-enhanced Raman scattering and intensity distribution in photonic crystal fiber with immobilized Ag nanoparticles. , 2009, Optics letters.

[34]  Tanya M Monro,et al.  Antibody immobilization within glass microstructured fibers: a route to sensitive and selective biosensors. , 2008, Optics express.

[35]  T. Kaneko,et al.  Wavelength trimming of a microring resonator filter by means of a UV sensitive polymer overlay , 1999, IEEE Photonics Technology Letters.

[36]  Y. Rao,et al.  Laser-micromachined Fabry-Perot optical fiber tip sensor for high-resolution temperature-independent measurement of refractive index. , 2008, Optics express.

[37]  R. Oleschuk,et al.  Parallel, fluorous open-tubular chromatography using microstructured fibers. , 2011, Analytica chimica acta.

[38]  Hervé Rigneault,et al.  Optical-fiber-microsphere for remote fluorescence correlation spectroscopy. , 2009, Optics express.

[39]  T. K. Gangopadhyay,et al.  Analysis and modeling of an optical fiber loop resonator and an evanescent field absorption sensor for the application for chemical detection , 2013 .

[40]  Bing Zhao,et al.  Photochemical modification of an optical fiber tip with a silver nanoparticle film: a SERS chemical sensor. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[41]  C. Gu,et al.  Novel index-guided photonic crystal fiber surface-enhanced Raman scattering probe. , 2008, Optics express.

[42]  Henry Du,et al.  Structure fits the purpose: photonic crystal fibers for evanescent-field surface-enhanced Raman spectroscopy. , 2010, Optics letters.

[43]  Alessio Stefani,et al.  Highly sensitive and simple method for refractive index sensing of liquids in microstructured optical fibers using four-wave mixing. , 2011, Optics express.

[44]  A. Huston,et al.  Strain-sensitive elastic scattering from cylinders. , 1993, Optics letters.

[45]  C. Cordeiro,et al.  Surface-Enhanced Resonance Raman Scattering (SERRS) Using Au Nanohole Arrays on Optical Fiber Tips , 2013, Plasmonics.

[46]  Yinian Zhu,et al.  Fabrication and characterization of solid-core photonic crystal fiber with steering-wheel air-cladding for strong evanescent field overlap , 2008 .

[47]  W. Rudolf Seitz,et al.  Chemical Sensors Based on Fiber Optics , 1984 .

[48]  Oliver Benson,et al.  Highly efficient fluorescence sensing with hollow core photonic crystal fibers. , 2007 .

[49]  Chen-Han Huang,et al.  Direct near-field optical imaging of plasmonic resonances in metal nanoparticle pairs. , 2010, Optics express.

[50]  Soumyo Mukherji,et al.  Study of localized surface-plasmon-resonance-based optical fiber sensor , 2011 .

[51]  Yuze Sun,et al.  Sensitive optical biosensors for unlabeled targets: a review. , 2008, Analytica chimica acta.

[52]  Andrew Docherty,et al.  Side-hole fiber sensor based on surface plasmon resonance. , 2009, Optics letters.

[53]  Hanan Anis,et al.  Monitoring of heparin concentration in serum by Raman spectroscopy within hollow core photonic crystal fiber. , 2011, Optics express.

[54]  Laura Marcu,et al.  Two‐photon excited fluorescence lifetime measurements through a double‐clad photonic crystal fiber for tissue micro‐endoscopy , 2012, Journal of biophotonics.

[55]  Kyunghwan Oh,et al.  Dispersion control in square lattice photonic crystal fiber using hollow ring defects. , 2012, Optics express.

[56]  N. Nguyen,et al.  Faster and improved microchip electrophoresis using a capillary bundle , 2007, Electrophoresis.

[57]  David J. Webb,et al.  Optical fibre Bragg grating recorded in TOPAS cyclic olefin copolymer , 2011 .

[58]  D. C. Rayner,et al.  Light dosimetry using the P3 approximation. , 2001, Physics in medicine and biology.

[59]  Anbo Wang,et al.  Observation of interference in a fiber taper interferometer with a subwavelength tip and its sensing applications. , 2009, Optics letters.

[60]  Fei Wang,et al.  Selective filling of photonic crystal fibers using focused ion beam milled microchannels. , 2011, Optics express.

[61]  W. Cao,et al.  Optical fiber evanescent wave sensor for oxygen deficiency detection , 2006 .

[62]  J. Jensen,et al.  Photonic crystal fiber based evanescent-wave sensor for detection of biomolecules in aqueous solutions , 2003, Conference on Lasers and Electro-Optics, 2003. CLEO '03..

[63]  A. Bjarklev,et al.  Gas sensing using air-guiding photonic bandgap fibers , 2004, Conference on Lasers and Electro-Optics, 2004. (CLEO)..

[64]  P. Radhakrishnan,et al.  A fibre optic evanescent wave sensor used for the detection of trace nitrites in water , 2002 .

[65]  M. González-Herráez,et al.  Fundamentals on new capillaries inspired by photonic crystal fibers as optofluidic separation systems in CE , 2015, Electrophoresis.

[66]  Nam-Trung Nguyen,et al.  Enhanced electrophoretic DNA separation in photonic crystal fiber , 2009, Analytical and bioanalytical chemistry.

[67]  Hans-Peter Loock,et al.  Chemical Sensing Using Fiber Cavity Ring-Down Spectroscopy , 2010, Sensors.

[68]  Paul R. Stoddart,et al.  The Effect of the Cladding Refractive Index on an Optical Fiber Evanescent-Wave Sensor , 2013, Journal of Lightwave Technology.

[69]  Marcos A. R. Franco,et al.  Microstructured-core optical fibre for evanescent sensing applications. , 2006, Optics express.

[70]  P. Russell Photonic Crystal Fibers , 2003, Science.

[71]  Jian-Neng Wang,et al.  Photonic Crystal Fiber Mach-Zehnder Interferometer for Refractive Index Sensing , 2012, Sensors.

[72]  Photonic crystal fibres as efficient separation component in capillary electrophoresis , 2014 .

[73]  Radhi M. Chyad,et al.  Nano-Optical Fiber Evanescent Field Sensors , 2012 .

[74]  Yue-Jing He,et al.  Novel D-shape LSPR fiber sensor based on nano-metal strips. , 2013, Optics express.

[75]  R. G. Priest,et al.  Optical fiber sensor technology , 1982, 1985 International Electron Devices Meeting.

[76]  M. Schmidt,et al.  Optofluidic refractive-index sensor in step-index fiber with parallel hollow micro-channel. , 2011, Optics express.

[77]  Yue-Jing He High-performance localized surface plasmon resonance fiber sensor based on nano-metal-gear array , 2014 .

[78]  G. Baffou,et al.  Charge distribution induced inside complex plasmonic nanoparticles. , 2010, Optics express.

[79]  Yue Jing He,et al.  Investigation of LPG-SPR sensors using the finite element method and eigenmode expansion method. , 2013, Optics express.

[80]  Erik P Schartner,et al.  Detection of quantum-dot labelled proteins using soft glass microstructured optical fibers. , 2007, Optics express.

[81]  Fetah Benabid,et al.  Particle levitation and guidance in hollow-core photonic crystal fiber. , 2002, Optics express.

[82]  Simon Fleming,et al.  Microstructured polymer optical fibre. , 2001 .

[83]  C. Choy,et al.  Dielectric properties and abnormal C-V characteristics of Ba[sub 0.5]Sr[sub 0.5]TiO₃-Bi[sub 1.5]ZnNb[sub 1.5]O[sub 7] composite thin films grown on MgO (001) substrates by pulsed laser deposition , 2006 .

[84]  M. Olivo,et al.  Highly sensitive SERS detection of cancer proteins in low sample volume using hollow core photonic crystal fiber. , 2012, Biosensors & bioelectronics.

[85]  C. Gu,et al.  Highly sensitive detection of proteins and bacteria in aqueous solution using surface-enhanced Raman scattering and optical fibers. , 2011, Analytical chemistry.

[86]  Jacques Albert,et al.  Intrinsic temperature sensitivity of tilted fiber Bragg grating based surface plasmon resonance sensors. , 2010, Optics express.

[87]  Wei-Chih Liu,et al.  Fluorescence enhancements of fiber-optic biosensor with metallic nanoparticles. , 2009, Optics express.

[88]  Rudolf M. Verdaasdonk,et al.  Optics of Fibers and Fiber Probes , 1995 .

[89]  Francisco J. Arregui,et al.  Optical fiber pH sensors based on layer-by-layer electrostatic self-assembled Neutral Red , 2008 .

[90]  J. Peterson,et al.  Fiber-optic sensors for biomedical applications. , 1984, Science.

[91]  Tanya M Monro,et al.  Dip biosensor based on localized surface plasmon resonance at the tip of an optical fiber. , 2014, Langmuir : the ACS journal of surfaces and colloids.

[92]  Xudong Fan,et al.  Ultrasensitive optofluidic surface-enhanced Raman scattering detection with flow-through multihole capillaries. , 2012, ACS nano.

[93]  Chia-Yang Tsai,et al.  High sensitivity plasmonic index sensor using slab-like gold nanoring array , 2011, CLEO: 2011 - Laser Science to Photonic Applications.

[94]  J. Jensen,et al.  Photonic crystal fiber long-period gratings for biochemical sensing. , 2006, Optics express.

[95]  Meikun Fan,et al.  Multilayer silver nanoparticles-modified optical fiber tip for high performance SERS remote sensing. , 2010, Biosensors & bioelectronics.

[96]  Claire Gu,et al.  Direct molecule-specific glucose detection by Raman spectroscopy based on photonic crystal fiber , 2011, Analytical and Bioanalytical Chemistry.

[97]  Ole Bang,et al.  Label-free and selective nonlinear fiber-optical biosensing. , 2008, Optics express.

[98]  Pei-Kuen Wei,et al.  Nanofiber optic sensor based on the excitation of surface plasmon wave near fiber tip. , 2006, Journal of biomedical optics.

[99]  Brian C Wilson,et al.  Radiance-based monitoring of the extent of tissue coagulation during laser interstitial thermal therapy. , 2004, Optics letters.

[100]  Malik Kaya,et al.  Reproducibly reversible fiber loop ringdown water sensor embedded in concrete and grout for water monitoring , 2013 .

[101]  Benjamin J. Eggleton,et al.  Ultra-sensitive photonic crystal fiber refractive index sensor , 2009, 2009 Conference on Lasers and Electro-Optics and 2009 Conference on Quantum electronics and Laser Science Conference.

[102]  Peter M. Dower,et al.  Optimal refractive index design for an optical fibre-based evanescent field sensor , 2007, Syst. Control. Lett..

[103]  John M. Fini,et al.  Microstructure fibres for optical sensing in gases and liquids , 2004 .

[104]  Yinian Zhu,et al.  Fiber humidity sensors with high sensitivity and selectivity based on interior nanofilm-coated photonic crystal fiber long-period gratings , 2013 .

[105]  Anders Bjarklev,et al.  Selective filling of Photonic Crystal Fibres , 2005 .

[106]  Yang Zou,et al.  E-Beam Patterned Gold Nanodot Arrays on Optical Fiber Tips for Localized Surface Plasmon Resonance Biochemical Sensing , 2010, Sensors.

[107]  E. M. dos Santos,et al.  Lateral access to the holes of photonic crystal fibers - selective filling and sensing applications. , 2006, Optics express.

[108]  Graham T T Gibson,et al.  Bundled capillary electrophoresis using microstructured fibres , 2011, Electrophoresis.

[109]  Ole Bang,et al.  Towards biochips using microstructured optical fiber sensors , 2006, Analytical and bioanalytical chemistry.

[110]  Reconstructing holographic quintessence , 2006, astro-ph/0604484.

[111]  Ole Bang,et al.  Refractive Index Sensing in an All-Solid Twin-Core Photonic Bandgap Fiber , 2010, IEEE Sensors Journal.

[112]  M. Schmidt,et al.  Optical properties of photonic crystal fiber with integral micron-sized Ge wire. , 2008, Optics express.

[113]  Knight,et al.  Photonic band gap guidance in optical fibers , 1998, Science.

[114]  V. M. Murukeshan,et al.  An integrated hollow-core photonic crystal fiber transverse optical trapping system for optical manipulation and detection , 2012 .

[115]  Michael Scalora,et al.  Photonic-crystal fiber as a multifunctional optical sensor and sample collector. , 2005, Optics express.

[116]  B. D. Gupta,et al.  Surface-plasmon-resonance-based fiber-optic refractive index sensor: sensitivity enhancement. , 2011, Applied optics.

[117]  Hervé Rigneault,et al.  Hollow-core photonic crystal fiber probe for remote fluorescence sensing with single molecule sensitivity. , 2012, Optics express.

[118]  Alexander Argyros,et al.  Surface enhanced Raman scattering in a hollow core microstructured optical fiber. , 2007, Optics express.

[119]  Jens Kobelke,et al.  Fast response in-line gas sensor using C-type fiber and Ge-doped ring defect photonic crystal fiber. , 2013, Optics express.

[120]  Michael J. Sepaniak,et al.  Chemical Sensors Based on Immobilized Indicators and Fiber Optics , 1988 .

[121]  Soumyo Mukherji,et al.  Gold nanoparticle coated U-bend fibre optic probe for localized surface plasmon resonance based detection of explosive vapours , 2014 .

[122]  Peter Wasserscheid,et al.  Photonic crystal fibres for chemical sensing and photochemistry. , 2013, Chemical Society reviews.

[123]  J. Jensen,et al.  Selective detection of antibodies in microstructured polymer optical fibers. , 2005, Optics express.

[124]  Juan Hernández-Cordero,et al.  Liquids analysis using back reflection single-mode fiber sensors , 2011, International Commission for Optics.

[125]  O. Wolfbeis Fiber-optic chemical sensors and biosensors. , 2000, Analytical chemistry.

[126]  Günter Gauglitz,et al.  Surface plasmon resonance sensors: review , 1999 .

[127]  An HC-PCF Fluorescence Spectrocopy for Detection of Microsphere Samples Based on Refractive Index Scaling Law , 2011 .

[128]  Jörg P Kutter,et al.  Optical detection in microfluidic systems , 2009, Electrophoresis.

[129]  Richard Lwin,et al.  Opening up optical fibres. , 2007, Optics express.

[130]  Anita C Jones,et al.  Spectrofluorimetry with attomole sensitivity in photonic crystal fibres , 2013, Methods and applications in fluorescence.

[131]  Limin Xiao,et al.  Fabrication of selective injection microstructured optical fibers with a conventional fusion splicer. , 2005, Optics express.

[132]  Ole Bang,et al.  Localized biosensing with Topas microstructured polymer optical fiber , 2007 .

[133]  David J. Richardson,et al.  Sensing with microstructured optical fibres , 2001 .

[134]  J. Baumberg,et al.  Surface‐Enhanced Raman Scattering Using Microstructured Optical Fiber Substrates , 2007 .

[135]  Philip St. J. Russell Photonic band gaps , 1992 .

[136]  M. Scharrer,et al.  Quantitative broadband chemical sensing in air-suspended solid-core fibers , 2007, 2008 Conference on Lasers and Electro-Optics and 2008 Conference on Quantum Electronics and Laser Science.

[137]  Yinian Zhu,et al.  Design of solid-core microstructured optical fiber with steering-wheel air cladding for optimal evanescent-field sensing. , 2006, Optics express.

[138]  Tao Wei,et al.  Temperature-insensitive miniaturized fiber inline Fabry-Perot interferometer for highly sensitive refractive index measurement. , 2008, Optics express.

[139]  F. Benabid,et al.  Stimulated Raman Scattering in Hydrogen-Filled Hollow-Core Photonic Crystal Fiber , 2002, Science.