Ecophysiological Modeling of Grapevine Water Stress in Burgundy Terroirs by a Machine-Learning Approach

In a climate change scenario, successful modeling of the relationships between plant-soil-meteorology is crucial for a sustainable agricultural production, especially for perennial crops. Grapevines (Vitis vinifera L. cv Chardonnay) located in eight experimental plots (Burgundy, France) along a hillslope were monitored weekly for 3 years for leaf water potentials, both at predawn (Ψpd) and at midday (Ψstem). The water stress experienced by grapevine was modeled as a function of meteorological data (minimum and maximum temperature, rainfall) and soil characteristics (soil texture, gravel content, slope) by a gradient boosting machine. Model performance was assessed by comparison with carbon isotope discrimination (δ13C) of grape sugars at harvest and by the use of a test-set. The developed models reached outstanding prediction performance (RMSE < 0.08 MPa for Ψstem and < 0.06 MPa for Ψpd), comparable to measurement accuracy. Model predictions at a daily time step improved correlation with δ13C data, respect to the observed trend at a weekly time scale. The role of each predictor in these models was described in order to understand how temperature, rainfall, soil texture, gravel content and slope affect the grapevine water status in the studied context. This work proposes a straight-forward strategy to simulate plant water stress in field condition, at a local scale; to investigate ecological relationships in the vineyard and adapt cultural practices to future conditions.

[1]  J. Houghton,et al.  Climate Change 2013 - The Physical Science Basis: Working Group I Contribution to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change , 2014 .

[2]  C. Lovisolo,et al.  Grapevine adaptations to water stress: new perspectives about soil/plant interactions , 2016, Theoretical and Experimental Plant Physiology.

[3]  Christian Gary,et al.  Spatial and temporal changes to the water regime of a Mediterranean vineyard due to the adoption of cover cropping , 2008 .

[4]  O. Mathieu,et al.  Electrical imaging of soil water availability to grapevine: a benchmark experiment of several machine-learning techniques , 2016, Precision Agriculture.

[5]  K. Kersebaum,et al.  A simple model approach to simulate nitrogen dynamics in vineyard soils , 2004 .

[6]  A. Pellegrino,et al.  Relationships between plant and soil water status in vine (Vitis vinifera L.) , 2005, Plant and Soil.

[7]  D. Dubourdieu,et al.  Influence of water and nitrogen deficit on fruit ripening and aroma potential of Vitis vinifera L cv Sauvignon blanc in field conditions , 2005 .

[8]  C. Riou,et al.  Un modèle simple d'interception du rayonnement solaire par la vigne - vérification expérimentale , 1989 .

[9]  P. Cooper,et al.  Projecting the Future , 1999 .

[10]  Benjamin Bois,et al.  Vine water status is a key factor in grape ripening and vintage quality for red Bordeaux wine. How can it be assessed for vineyard management purposes , 2009 .

[11]  Stefano Poni,et al.  Description and testing of a weather-based model for predicting phenology, canopy development and source-sink balance in Vitis vinifera L. cv. Barbera , 2014 .

[12]  Luis S. Pereira,et al.  Using the dual-Kc approach to model evapotranspiration of Albariño vineyards (Vitis vinifera L. cv. Albariño) with consideration of active ground cover , 2012 .

[13]  Jean Lévêque,et al.  Monitoring soil volume wetness in heterogeneous soils by electrical resistivity. A field-based pedotransfer function , 2014 .

[14]  Robert Tibshirani,et al.  The Elements of Statistical Learning: Data Mining, Inference, and Prediction, 2nd Edition , 2001, Springer Series in Statistics.

[15]  Klaus Winter,et al.  Environmental and physiological determinants of carbon isotope discrimination in terrestrial plants. , 2013, The New phytologist.

[16]  Jean Lévêque,et al.  Variations in soil-water use by grapevine according to plant water status and soil physical-chemical characteristics—A 3D spatio-temporal analysis , 2016 .

[17]  L. Williams,et al.  Simulating three‐dimensional grapevine canopies and modelling their light interception characteristics , 2013 .

[18]  J. R. Scotti,et al.  Available From , 1973 .

[19]  J. Pereira,et al.  Impact of deficit irrigation on water use efficiency and carbon isotope composition (delta13C) of field-grown grapevines under Mediterranean climate. , 2005, Journal of Experimental Botany.

[20]  Eric Lebon,et al.  A model-based diagnosis tool to evaluate the water stress experienced by grapevine in field sites , 2006 .

[21]  Paolo De Angelis,et al.  Reconciling the optimal and empirical approaches to modelling stomatal conductance , 2011 .

[22]  C. Lovisolo,et al.  Rootstock control of scion response to water stress in grapevine , 2013 .

[23]  D. Greer,et al.  Modelling photosynthetic responses to temperature of grapevine (Vitis vinifera cv. Semillon) leaves on vines grown in a hot climate. , 2012, Plant, cell & environment.

[24]  C. van Leeuwen,et al.  General phenological model to characterise the timing of flowering and veraison of Vitis vinifera L. , 2011 .

[25]  M. Friedman Greedy Fun tion Approximation : A Gradient Boosting , 1999 .

[26]  Bill Wilson,et al.  In a relationship , 2013 .

[27]  P. Reich,et al.  Least‐Cost Input Mixtures of Water and Nitrogen for Photosynthesis , 2002, The American Naturalist.

[28]  Cornelis van Leeuwen,et al.  Influence of Climate, Soil, and Cultivar on Terroir , 2004, American Journal of Enology and Viticulture.

[29]  Christian Gary,et al.  WaLIS--A simple model to simulate water partitioning in a crop association: The example of an intercropped vineyard , 2010 .

[30]  P. Cournède,et al.  Comparison of three approaches to model grapevine organogenesis in conditions of fluctuating temperature, solar radiation and soil water content. , 2011, Annals of botany.

[31]  P. Vivin,et al.  Comparison of Three Operational Tools for the Assessment of Vine Water Status: Stem Water Potential , Carbon Isotope Discrimination Measured on Grape Sugar and Water Balance , 2010 .

[32]  B. Myers Water stress integral-a link between short-term stress and long-term growth. , 1988, Tree physiology.

[33]  Justin T. Maxwell,et al.  Projecting future winegrape yields using a combination of Vitis vinifera L. growth rings and soil moisture simulations, northern California, USA , 2016 .

[34]  Hans R. Schultz,et al.  Constructing a framework for risk analyses of climate change effects on the water budget of differently sloped vineyards with a numeric simulation using the Monte Carlo method coupled to a water balance model , 2014, Front. Plant Sci..

[35]  Graham D. Farquhar,et al.  On the Relationship Between Carbon Isotope Discrimination and the Intercellular Carbon Dioxide Concentration in Leaves , 1982 .

[36]  A. Destrac-Irvine,et al.  Impact of soil texture and water availability on the hydraulic control of plant and grape-berry development , 2013, Plant and Soil.

[37]  J Elith,et al.  A working guide to boosted regression trees. , 2008, The Journal of animal ecology.

[38]  Jean Lévêque,et al.  The use of soil electrical resistivity to monitor plant and soil water relationships in vineyards. , 2014 .

[39]  M. Voltz,et al.  Measurement and modelling of the transpiration of a Mediterranean vineyard , 2001 .

[40]  M. Stoll,et al.  Soil water-holding capacity mediates hydraulic and hormonal signals of near-isohydric and near-anisohydric Vitis cultivars in potted grapevines. , 2014, Functional plant biology : FPB.

[41]  Marco Bindi,et al.  Modelling olive trees and grapevines in a changing climate , 2015, Environ. Model. Softw..

[42]  Christian Gary,et al.  Model-based evaluation of irrigation needs in Mediterranean vineyards , 2012, Irrigation Science.

[43]  N. Ollat,et al.  Carbon isotope composition of sugars in grapevine, an integrated indicator of vineyard water status. , 2002, Journal of experimental botany.

[44]  Sara Tramontini,et al.  Chapter 6. Methods for assessment of hydraulic conductance and embolism extent in grapevine organs , 2010 .

[45]  Joe T. Ritchie,et al.  Water dynamics in the soil-plant-atmosphere system , 1981, Plant and Soil.

[46]  Vincent Dumas,et al.  Modelling the seasonal dynamics of the soil water balance of vineyards. , 2003, Functional plant biology : FPB.

[47]  A. Gambuti,et al.  Functional homogeneous zones (fHZs) in viticultural zoning procedure: an Italian case study on Aglianico vine , 2015 .

[48]  S. Tyerman,et al.  The Role of Plasma Membrane Intrinsic Protein Aquaporins in Water Transport through Roots: Diurnal and Drought Stress Responses Reveal Different Strategies between Isohydric and Anisohydric Cultivars of Grapevine1[OA] , 2008, Plant Physiology.

[49]  P. F. Scholander,et al.  Sap Pressure in Vascular Plants , 1965, Science.

[50]  Simone Giacosa,et al.  Investigating the use of gradient boosting machine, random forest and their ensemble to predict skin flavonoid content from berry physical-mechanical characteristics in wine grapes , 2015, Comput. Electron. Agric..

[51]  Michael Schroeder Model-Based Diagnosis , 1998 .

[52]  J. Friedman Greedy function approximation: A gradient boosting machine. , 2001 .

[53]  J E Begg,et al.  Water potential gradients in field tobacco. , 1970, Plant physiology.

[54]  Cornelis van Leeuwen,et al.  Stem Water Potential is a Sensitive Indicator of Grapevine Water Status , 2001 .

[55]  Alan Hastings,et al.  Process-based models are required to manage ecological systems in a changing world , 2013 .

[56]  D. Greer,et al.  The impact of high temperatures on Vitis vinifera cv. Semillon grapevine performance and berry ripening , 2013, Front. Plant Sci..

[57]  C. van Leeuwen,et al.  The concept of terroir in viticulture , 2006 .

[58]  S. Poni,et al.  Performance and water-use efficiency (single-leaf vs. whole-canopy) of well watered and half stressed split-root Lambrusco grapevines. , 2009 .

[59]  A. P. Williams,et al.  Empirical and process-based approaches to climate-induced forest mortality models , 2013, Front. Plant Sci..

[60]  G. Farquhar,et al.  Optimal stomatal control in relation to leaf area and nitrogen content , 2002 .

[61]  Sven Erik Jørgensen Ecological modelling and systems ecology , 1999 .

[62]  Jérémie Lecoeur,et al.  Influence of trellis system and shoot positioning on light interception and distribution in two grapevine cultivars with different architectures: an original approach based on 3D canopy modelling , 2008 .

[63]  J. Ehleringer,et al.  Carbon Isotope Discrimination and Photosynthesis , 1989 .

[64]  G. D. FarquharA,et al.  On the Relationship between Carbon Isotope Discrimination and the Intercellular Carbon Dioxide Concentration in Leaves , 2005 .