Structures of Shikimate Dehydrogenase AroE and Its Paralog YdiB
暂无分享,去创建一个
Allan Matte | Miroslaw Cygler | Adrian J. Lapthorn | J. Coggins | J. Maclean | A. Matte | G. Michel | M. Cygler | A. Lapthorn | A. Roszak | V. Sauvé | Gurvan Michel | Aleksander W. Roszak | Véronique Sauvé | John Maclean | John R. Coggins
[1] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[2] C. Chothia,et al. The atomic structure of protein-protein recognition sites. , 1999, Journal of molecular biology.
[3] J. Coggins,et al. Sequencing and overexpression of the Escherichia coli aroE gene encoding shikimate dehydrogenase. , 1988, The Biochemical journal.
[4] N. Amrhein,et al. The herbicide glyphosate is a potent inhibitor of 5-enolpyruvyl-shikimic acid-3-phosphate synthase. , 1980, Biochemical and biophysical research communications.
[5] P. Taylor,et al. Structure of Ocr from bacteriophage T7, a protein that mimics B-form DNA. , 2002, Molecular cell.
[6] R J Read,et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.
[7] K. Herrmann,et al. THE SHIKIMATE PATHWAY. , 1999, Annual review of plant physiology and plant molecular biology.
[8] J. Coggins,et al. Crystallization and preliminary X-ray analysis of shikimate dehydrogenase from Escherichia coli. , 2000, Acta crystallographica. Section D, Biological crystallography.
[9] C. Sander,et al. Protein structure comparison by alignment of distance matrices. , 1993, Journal of molecular biology.
[10] R. Azerad,et al. The shikimate pathway : II. Stereospecificity of hydrogen transfer catalyzed by NADPH-dehydroshikimate reductase of E. coli. , 1976, Biochimie.
[11] T. Krell,et al. Chemical modification monitored by electrospray mass spectrometry: a rapid and simple method for identifying and studying functional residues in enzymes. , 2009, The journal of peptide research : official journal of the American Peptide Society.
[12] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[13] S. Taylor,et al. Structure-function relationships in lactate dehydrogenase. , 1973, Proceedings of the National Academy of Sciences of the United States of America.
[14] A. Fersht. Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis. , 1988, Biochemistry.
[15] S. Baerson,et al. Glyphosate-Resistant Goosegrass. Identification of a Mutation in the Target Enzyme 5-Enolpyruvylshikimate-3-Phosphate Synthase , 2002, Plant Physiology.
[16] T. Krell,et al. The three-dimensional structure of shikimate kinase. , 1998, Journal of molecular biology.
[17] I. Charles,et al. The pre-chorismate (shikimate) and quinate pathways in filamentous fungi: theoretical and practical aspects. , 1993, Journal of general microbiology.
[18] Anastassis Perrakis,et al. Automated protein model building combined with iterative structure refinement , 1999, Nature Structural Biology.
[19] Collaborative Computational,et al. The CCP4 suite: programs for protein crystallography. , 1994, Acta crystallographica. Section D, Biological crystallography.
[20] J. Thornton,et al. PROCHECK: a program to check the stereochemical quality of protein structures , 1993 .
[21] J. Coggins,et al. The purification of shikimate dehydrogenase from Escherichia coli. , 1985, The Biochemical journal.
[22] W. Watkins,et al. (6S)-6-fluoroshikimic acid, an antibacterial agent acting on the aromatic biosynthetic pathway , 1994, Antimicrobial Agents and Chemotherapy.
[23] Patrice Gouet,et al. ESPript: analysis of multiple sequence alignments in PostScript , 1999, Bioinform..
[24] D. Shah,et al. Amino acid biosynthesis inhibitors as herbicides. , 1988, Annual review of biochemistry.
[25] Chris Abell,et al. The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor. , 2002, Structure.
[26] J. Zou,et al. Improved methods for building protein models in electron density maps and the location of errors in these models. , 1991, Acta crystallographica. Section A, Foundations of crystallography.
[27] J. Coggins,et al. The characterisation of the shikimate pathway enzyme dehydroquinase from Pisum sativum , 1994, FEBS letters.
[28] A. Hawkins,et al. Molecular organisation of the quinic acid utilization (QUT) gene cluster in Aspergillus nidulans , 1988, Molecular and General Genetics MGG.
[29] E. Carpenter,et al. Structure of dehydroquinate synthase reveals an active site capable of multistep catalysis , 1998, Nature.
[30] Julio Collado-Vides,et al. RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12 , 2001, Nucleic Acids Res..
[31] Lindsay Sawyer,et al. The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction , 1999, Nature Structural Biology.
[32] P. Kraulis. A program to produce both detailed and schematic plots of protein structures , 1991 .
[33] W. Kabsch,et al. Interaction of the herbicide glyphosate with its target enzyme 5-enolpyruvylshikimate 3-phosphate synthase in atomic detail. , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[34] D. Chakrabarti,et al. Evidence for the shikimate pathway in apicomplexan parasites , 1998, Nature.
[35] U. Samanta,et al. CH/pi interaction in the packing of the adenine ring in protein structures. , 1995, Journal of molecular biology.
[36] D. Balinsky,et al. Aromatic biosynthesis in higher plants. 2. Mode of attachment of shikimic acid and dehydroshikimic acid to dehydroshikimic reductase. , 1961, The Biochemical journal.
[37] J R Coggins,et al. The 3-dehydroquinate synthase activity of the pentafunctional arom enzyme complex of Neurospora crassa is Zn2+-dependent. , 1985, The Biochemical journal.
[38] J. Coggins,et al. Specificity of E. Coli shikimate dehydrogenase towards analogues of 3-dehydroshikimic acid , 1988 .
[39] K. Sharp,et al. Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons , 1991, Proteins.
[40] C. A. Fewson,et al. The Biology of Acinetobacter , 1991, Federation of European Microbiological Societies Symposium Series.
[41] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[42] W A Hendrickson,et al. Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): a vehicle for direct determination of three‐dimensional structure. , 1990, The EMBO journal.
[43] J. Nishimura,et al. N,N'-o-Phenylenedi[1,4-14C]maleimide. Its synthesis and application in the cross-linking of Escherichia coli succinic thiokinase. , 1978, The International journal of biochemistry.
[44] S. Burley,et al. Crystal structure of the Escherichia coli shikimate kinase I (AroK) that confers sensitivity to mecillinam , 2002, Proteins.
[45] B. Rutledge,et al. DNA sequence, organization and regulation of the qa gene cluster of Neurospora crassa. , 1989, Journal of molecular biology.
[46] P Argos,et al. NADP‐Dependent enzymes. I: Conserved stereochemistry of cofactor binding , 1997, Proteins.
[47] G. Pettersson,et al. Effect of NADH on the pKa of zinc-bound water in liver alcohol dehydrogenase. , 1981, European journal of biochemistry.