Computational Cognitive Neuroscience

Computational cognitive neuroscience is an emerging discipline that employs mathematical analysis and computational models to understand the neural basis of cognitive functions. The papers in this special issue are based on a selection of the best presentations at the 2007 meeting of the Computational Cognitive Neuroscience (CCN) conference. The CCN conference focuses on research at the intersection of neuroscience, cognitive psychology and computational modeling, where neuroscience-based computational models are used to simulate and understand cognitive functions such as learning, memory, attention, language, perception, decision making and cognitive control. Because CCN research complements traditional empirical approaches such as neuroimaging, cellular electrophysiology and behavioral measurements, a major goal of this conference is to encourage cross-disciplinary interactions between theoreticians and empiricists, across multiple levels of investigation within cognitive neuroscience. It is for this reason of encouraging cross-disciplinary interactions that the CCN conference partners with different host conferences each year: In 2007, the CCN meeting took place prior to the Society for Neuroscience conference in San Diego and in 2009, the meeting will be held in conjunction with the Psychonomics Society meeting in Boston. The CCN program committee reviewed all oral and poster presentations at the 2007 conference and invited seven authors to submit full-length papers for this special issue based on their presentations. Selection criteria included a significant contribution to the field, a substantial computational modeling component, and a clear linkage between the neural and cognitive levels of explanation. All papers in this issue underwent a rigorous reviewing process, with 2–3 reviewers providing at least two rounds of reviews per article. While acceptance was not guaranteed from the outset, all seven of the invited submissions were finally accepted for inclusion. The papers in this issue are grouped according to three themes: (1) Vision and visual working memory; (2) High-level memory systems; and (3) Reward and decision making. In the vision theme, two articles (by Rokem and Silver and by Johnson, Spencer, and Schner) span visual phenomena ranging from early sensory coding to high-level visual decision-making. In Rokem and Silver's article “A model of encoding and decoding in V1 and MT...” the authors first

[1]  C. L. Hull Principles of Behavior , 1945 .

[2]  Allen Newell,et al.  Elements of a theory of human problem solving. , 1958 .

[3]  F ROSENBLATT,et al.  The perceptron: a probabilistic model for information storage and organization in the brain. , 1958, Psychological review.

[4]  R. FitzHugh Impulses and Physiological States in Theoretical Models of Nerve Membrane. , 1961, Biophysical journal.

[5]  W. Rall Distinguishing theoretical synaptic potentials computed for different soma-dendritic distributions of synaptic input. , 1967, Journal of neurophysiology.

[6]  Chi-Tsong Chen,et al.  Introduction to linear system theory , 1970 .

[7]  J. Cowan,et al.  Excitatory and inhibitory interactions in localized populations of model neurons. , 1972, Biophysical journal.

[8]  R. Weale Vision. A Computational Investigation Into the Human Representation and Processing of Visual Information. David Marr , 1983 .

[9]  James T. Townsend,et al.  The Stochastic Modeling of Elementary Psychological Processes , 1983 .

[10]  B. Øksendal Stochastic Differential Equations , 1985 .

[11]  James L. McClelland,et al.  Parallel distributed processing: explorations in the microstructure of cognition, vol. 1: foundations , 1986 .

[12]  S. Wiggins Introduction to Applied Nonlinear Dynamical Systems and Chaos , 1989 .

[13]  Idan Segev,et al.  Compartmental models of complex neurons , 1989 .

[14]  D. Tank,et al.  Brain magnetic resonance imaging with contrast dependent on blood oxygenation. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[15]  W. Pitts,et al.  A Logical Calculus of the Ideas Immanent in Nervous Activity (1943) , 2021, Ideas That Created the Future.

[16]  J. Cohen,et al.  Context, cortex, and dopamine: a connectionist approach to behavior and biology in schizophrenia. , 1992, Psychological review.

[17]  J. Bower,et al.  Exploring parameter space in detailed single neuron models: simulations of the mitral and granule cells of the olfactory bulb. , 1993, Journal of neurophysiology.

[18]  Joel L. Davis,et al.  A Model of How the Basal Ganglia Generate and Use Neural Signals That Predict Reinforcement , 1994 .

[19]  W. Schultz,et al.  Importance of unpredictability for reward responses in primate dopamine neurons. , 1994, Journal of neurophysiology.

[20]  W. Estes Toward a Statistical Theory of Learning. , 1994 .

[21]  D. Linden,et al.  Long-term synaptic depression in the mammalian brain , 1994, Neuron.

[22]  Scott T. Grafton,et al.  Functional Mapping of Sequence Learning in Normal Humans , 1995, Journal of Cognitive Neuroscience.

[23]  James L. McClelland,et al.  Why there are complementary learning systems in the hippocampus and neocortex: insights from the successes and failures of connectionist models of learning and memory. , 1995, Psychological review.

[24]  Dhanistha Panyasak,et al.  Circuits , 1995, Annals of the New York Academy of Sciences.

[25]  D. Heeger,et al.  Linear Systems Analysis of Functional Magnetic Resonance Imaging in Human V1 , 1996, The Journal of Neuroscience.

[26]  M. Feenstra,et al.  Rapid sampling of extracellular dopamine in the rat prefrontal cortex during food consumption, handling and exposure to novelty , 1996, Brain Research.

[27]  R. O’Reilly,et al.  A computational approach to prefrontal cortex, cognitive control and schizophrenia: recent developments and current challenges. , 1996, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[28]  Bard Ermentrout,et al.  Type I Membranes, Phase Resetting Curves, and Synchrony , 1996, Neural Computation.

[29]  Peter Dayan,et al.  A Neural Substrate of Prediction and Reward , 1997, Science.

[30]  F. Waismann The Logical Calculus , 1997 .

[31]  Gregory Ashby,et al.  A neuropsychological theory of multiple systems in category learning. , 1998, Psychological review.

[32]  J. Hollerman,et al.  Dopamine neurons report an error in the temporal prediction of reward during learning , 1998, Nature Neuroscience.

[33]  R. O’Reilly Six principles for biologically based computational models of cortical cognition , 1998, Trends in Cognitive Sciences.

[34]  Li I. Zhang,et al.  A critical window for cooperation and competition among developing retinotectal synapses , 1998, Nature.

[35]  Charles F Stevens,et al.  Synaptic plasticity , 1998, Current Biology.

[36]  Randy L. Haupt,et al.  Practical Genetic Algorithms , 1998 .

[37]  Vivien A. Casagrande,et al.  Biophysics of Computation: Information Processing in Single Neurons , 1999 .

[38]  Daniel B. Willingham,et al.  Implicit motor sequence learning is represented in response locations , 2000, Memory & cognition.

[39]  B. Richmond,et al.  Intrinsic dynamics in neuronal networks. I. Theory. , 2000, Journal of neurophysiology.

[40]  T. Zandt,et al.  A comparison of two response time models applied to perceptual matching , 2000, Psychonomic bulletin & review.

[41]  J. O’Keefe,et al.  Modeling place fields in terms of the cortical inputs to the hippocampus , 2000, Hippocampus.

[42]  S. J. Martin,et al.  Synaptic plasticity and memory: an evaluation of the hypothesis. , 2000, Annual review of neuroscience.

[43]  K. Doya Complementary roles of basal ganglia and cerebellum in learning and motor control , 2000, Current Opinion in Neurobiology.

[44]  Michael J. Frank,et al.  Interactions between frontal cortex and basal ganglia in working memory: A computational model , 2001, Cognitive, affective & behavioral neuroscience.

[45]  James L. McClelland,et al.  The time course of perceptual choice: the leaky, competing accumulator model. , 2001, Psychological review.

[46]  Z. Bashir,et al.  Long-term depression: a cascade of induction and expression mechanisms , 2001, Progress in Neurobiology.

[47]  Peter Dayan,et al.  Theoretical Neuroscience: Computational and Mathematical Modeling of Neural Systems , 2001 .

[48]  N. Logothetis,et al.  Neurophysiological investigation of the basis of the fMRI signal , 2001, Nature.

[49]  W. Newsome,et al.  Neural basis of a perceptual decision in the parietal cortex (area LIP) of the rhesus monkey. , 2001, Journal of neurophysiology.

[50]  G. Bi,et al.  Synaptic modification by correlated activity: Hebb's postulate revisited. , 2001, Annual review of neuroscience.

[51]  J. Lisman,et al.  The molecular basis of CaMKII function in synaptic and behavioural memory , 2002, Nature Reviews Neuroscience.

[52]  Jack van Honk,et al.  On the role of the SMA in the discrete sequence production task: a TMS study , 2002, Neuropsychologia.

[53]  W. Schultz Getting Formal with Dopamine and Reward , 2002, Neuron.

[54]  I. J. Myung,et al.  Toward a method of selecting among computational models of cognition. , 2002, Psychological review.

[55]  W. Schultz,et al.  Coding of Predicted Reward Omission by Dopamine Neurons in a Conditioned Inhibition Paradigm , 2003, The Journal of Neuroscience.

[56]  Eugene M. Izhikevich,et al.  Simple model of spiking neurons , 2003, IEEE Trans. Neural Networks.

[57]  Q. Gu Contribution of acetylcholine to visual cortex plasticity , 2003, Neurobiology of Learning and Memory.

[58]  N. Logothetis The Underpinnings of the BOLD Functional Magnetic Resonance Imaging Signal , 2003, The Journal of Neuroscience.

[59]  Shawn W. Ell,et al.  Procedural learning in perceptual categorization , 2003, Memory & cognition.

[60]  Freeman Dyson,et al.  A meeting with Enrico Fermi , 2004, Nature.

[61]  Karl J. Friston,et al.  Dissociable Roles of Ventral and Dorsal Striatum in Instrumental Conditioning , 2004, Science.

[62]  Philip L. Smith,et al.  Psychology and neurobiology of simple decisions , 2004, Trends in Neurosciences.

[63]  Corey J. Bohil,et al.  Evidence for a procedural-learning-based system in perceptual category learning , 2004, Psychonomic bulletin & review.

[64]  Eugene M. Izhikevich,et al.  Which model to use for cortical spiking neurons? , 2004, IEEE Transactions on Neural Networks.

[65]  J. Cowan,et al.  A mathematical theory of the functional dynamics of cortical and thalamic nervous tissue , 1973, Kybernetik.

[66]  L. Ricciardi,et al.  The Ornstein-Uhlenbeck process as a model for neuronal activity , 1979, Biological Cybernetics.

[67]  F. Gregory Ashby,et al.  FROST: A Distributed Neurocomputational Model of Working Memory Maintenance , 2005, Journal of Cognitive Neuroscience.

[68]  Michael J. Frank,et al.  Dynamic Dopamine Modulation in the Basal Ganglia: A Neurocomputational Account of Cognitive Deficits in Medicated and Nonmedicated Parkinsonism , 2005, Journal of Cognitive Neuroscience.

[69]  Richard S. Sutton,et al.  Reinforcement Learning: An Introduction , 1998, IEEE Trans. Neural Networks.

[70]  P. Glimcher,et al.  Midbrain Dopamine Neurons Encode a Quantitative Reward Prediction Error Signal , 2005, Neuron.

[71]  J. Rothwell,et al.  Theta Burst Stimulation of the Human Motor Cortex , 2005, Neuron.

[72]  Helen E. Scharfman,et al.  Synaptic Plasticity and Transsynaptic Signaling , 2005 .

[73]  Jay I. Myung,et al.  Global model analysis by parameter space partitioning. , 2019, Psychological review.

[74]  D. Durstewitz,et al.  The ability of the mesocortical dopamine system to operate in distinct temporal modes , 2007, Psychopharmacology.

[75]  Eugene M. Izhikevich,et al.  Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting , 2006 .

[76]  P. Holmes,et al.  The dynamics of choice among multiple alternatives , 2006 .

[77]  J. NAGUMOt,et al.  An Active Pulse Transmission Line Simulating Nerve Axon , 2006 .

[78]  J. O'Doherty,et al.  Model‐Based fMRI and Its Application to Reward Learning and Decision Making , 2007, Annals of the New York Academy of Sciences.

[79]  P. Glimcher,et al.  Statistics of midbrain dopamine neuron spike trains in the awake primate. , 2007, Journal of neurophysiology.

[80]  Jaap M. J. Murre,et al.  Neural Models that Convince: Model Hierarchies and Other Strategies to Bridge the Gap Between Behavior and the Brain , 2007 .

[81]  Marius Usher,et al.  Extending a biologically inspired model of choice: multi-alternatives, nonlinearity and value-based multidimensional choice , 2007, Philosophical Transactions of the Royal Society B: Biological Sciences.

[82]  Kenji Doya,et al.  Reinforcement learning: Computational theory and biological mechanisms , 2007, HFSP journal.

[83]  P. J. Sjöström,et al.  Dendritic excitability and synaptic plasticity. , 2008, Physiological reviews.

[84]  S. A. Engel Computational Cognitive Neuroscience of the Visual , 2008 .

[85]  John R. Anderson,et al.  A central circuit of the mind , 2008, Trends in Cognitive Sciences.

[86]  Xiao-Jing Wang Decision Making in Recurrent Neuronal Circuits , 2008, Neuron.

[87]  Jennifer G. Waldschmidt,et al.  Fitting computational models to fMRI data , 2008 .

[88]  M. Lindquist The Statistical Analysis of fMRI Data. , 2008, 0906.3662.

[89]  D. Feldman Synaptic mechanisms for plasticity in neocortex. , 2009, Annual review of neuroscience.

[90]  B. Philpot,et al.  Advances in understanding visual cortex plasticity , 2009, Current Opinion in Neurobiology.

[91]  Brian D. Glass,et al.  Category label and response location shifts in category learning , 2009, Psychological research.

[92]  Antonio Rangel,et al.  Neural computations associated with goal-directed choice , 2010, Current Opinion in Neurobiology.

[93]  T. Robbins,et al.  Dopamine Modulation of the Prefrontal Cortex and Cognitive Function , 2010 .

[94]  R. Bogacz,et al.  The neural basis of the speed–accuracy tradeoff , 2010, Trends in Neurosciences.

[95]  Simon Haykin,et al.  Neural Networks and Learning Machines , 2010 .

[96]  David Terman,et al.  Mathematical foundations of neuroscience , 2010 .

[97]  F. Gregory Ashby,et al.  A Computational Model of How Cholinergic Interneurons Protect Striatal-dependent Learning , 2011, Journal of Cognitive Neuroscience.

[98]  A. Cooper,et al.  Predictive Reward Signal of Dopamine Neurons , 2011 .

[99]  Sébastien Hélie,et al.  A tutorial on computational cognitive neuroscience: Modeling the neurodynamics of cognition , 2011 .

[100]  John C. Rothwell,et al.  The theoretical model of theta burst form of repetitive transcranial magnetic stimulation , 2011, Clinical Neurophysiology.

[101]  C. Umilta,et al.  The use of transcranial magnetic stimulation in cognitive neuroscience: A new synthesis of methodological issues , 2011, Neuroscience & Biobehavioral Reviews.