Inferring transposons activity chronology by TRANScendence – TEs database and de-novo mining tool
暂无分享,去创建一个
[1] A. Gambin,et al. MuTAnT: a family of Mutator-like transposable elements targeting TA microsatellites in Medicago truncatula , 2015, Genetica.
[2] P. Capy,et al. Genomic parasites or symbionts? Modeling the effects of environmental pressure on transposition activity in asexual populations. , 2013, Theoretical population biology.
[3] S. Ramachandran,et al. Genome-Wide Survey and Comparative Analysis of LTR Retrotransposons and Their Captured Genes in Rice and Sorghum , 2013, PloS one.
[4] T. Flutre,et al. Considering Transposable Element Diversification in De Novo Annotation Approaches , 2011, PloS one.
[5] E. Lerat. Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs , 2010, Heredity.
[6] J. Jurka,et al. A universal classification of eukaryotic transposable elements implemented in Repbase , 2008, Nature Reviews Genetics.
[7] Roger P Wise,et al. TEnest: Automated Chronological Annotation and Visualization of Nested Plant Transposable Elements1[W][OA] , 2007, Plant Physiology.
[8] C. Bergman,et al. Recent LTR retrotransposon insertion contrasts with waves of non-LTR insertion since speciation in Drosophila melanogaster , 2007, Proceedings of the National Academy of Sciences.
[9] Gary Benson,et al. Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation , 2007, PLoS Comput. Biol..
[10] Zhao Xu,et al. LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons , 2007, Nucleic Acids Res..
[11] Maureen J Donlin,et al. Using the Generic Genome Browser (GBrowse) , 2007, Current protocols in bioinformatics.
[12] S. Wessler,et al. The Transposable Element Landscape of the Model Legume Lotus japonicus , 2006, Genetics.
[13] E. Birney,et al. Apollo: a sequence annotation editor , 2002, Genome Biology.
[14] Sudhir Kumar,et al. MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers , 1994, Comput. Appl. Biosci..
[15] P. Bingham,et al. On the theory of speciation induced by transposable elements. , 1984, Genetics.
[16] Robert E. Tarjan,et al. Depth-First Search and Linear Graph Algorithms , 1972, SIAM J. Comput..
[17] Richard M. Karp,et al. Reducibility Among Combinatorial Problems , 1972, 50 Years of Integer Programming.