Deciphering the genetic diversity and population structure of wild barley germplasm against corn leaf aphid, Rhopalosiphum maidis (Fitch)

[1]  J. Léon,et al.  Genetic diversity within landraces of barley (Hordeum vulgare L.) and its implications on germplasm collection and utilization , 2023, Genetic Resources and Crop Evolution.

[2]  P. Chhuneja,et al.  High-resolution genetic mapping of QTL governing resistance to corn leaf aphid, Rhopalosiphum maidis (Fitch) in barley , 2022, Cereal Research Communications.

[3]  S. Udupa,et al.  A Genome-Wide Association Study Identifying Single-Nucleotide Polymorphisms for Iron and Zinc Biofortification in a Worldwide Barley Collection , 2022, Plants.

[4]  B. Singh,et al.  Genetic diversity, population structure and relationship of Ethiopian barley (Hordeum vulgare L.) landraces as revealed by SSR markers , 2022, Journal of Genetics.

[5]  B. Singh,et al.  Spatial and temporal genetic variation in Ethiopian barley (Hordeum vulgare L.) landraces as revealed by simple sequence repeat (SSR) markers , 2021, Agriculture & Food Security.

[6]  W. Podyma,et al.  DArTseq Genotypic and Phenotypic Diversity of Barley Landraces Originating from Different Countries , 2021, Agronomy.

[7]  B. Singh,et al.  Study on variability in resistance to barley yellow dwarf virus (BYDV-PAV) among Ethiopian barley (Hordeum vulgare L.) landraces , 2021, Indian Phytopathology.

[8]  R. Malik,et al.  Population structure and diversity assessment of barley (Hordeum vulgare L.) introduction from ICARDA , 2020, Journal of Genetics.

[9]  B. Singh,et al.  Diversity and resistance components analysis of barley landraces to barley shoot fly (Delia flavibasis) , 2020 .

[10]  A. Shimono,et al.  Genetic diversity and population structure of feral rapeseed (Brassica napus L.) in Japan , 2020, PloS one.

[11]  R. Brueggeman,et al.  Assessment of genetic diversity in Egyptian barley (Hordeum vulgare L.) genotypes using SSR and SNP markers , 2018, Genetic Resources and Crop Evolution.

[12]  John Scade Cereals , 2018, OECD-FAO Agricultural Outlook 2018-2027.

[13]  A. Sreedasyam,et al.  Molecular and phenotypic diversity of ICARDA spring barley (Hordeum vulgare L.) collection , 2017, Genetic Resources and Crop Evolution.

[14]  G. Galla,et al.  Developing a Molecular Identification Assay of Old Landraces for the Genetic Authentication of Typical Agro-Food Products: The Case Study of the Barley 'Agordino'. , 2017, Food technology and biotechnology.

[15]  Á. Helgadóttir,et al.  Genetic diversity, population structure and linkage disequilibrium in Nordic spring barley (Hordeum vulgare L. subsp. vulgare) , 2017, Genetic Resources and Crop Evolution.

[16]  T. Kumamaru,et al.  Population structure and marker-trait association of salt tolerance in barley (Hordeum vulgare L.). , 2016, Comptes rendus biologies.

[17]  P. Bourke,et al.  Genetic diversity and population structure of Brassica oleracea germplasm in Ireland using SSR markers. , 2016, Comptes rendus biologies.

[18]  J. Léon,et al.  Landscape genomics reveal signatures of local adaptation in barley (Hordeum vulgare L.) , 2015, Front. Plant Sci..

[19]  Y. Shang,et al.  A study of genetic diversity of colored barley (Hordeum vulgare L.) using SSR markers , 2015, Genetic Resources and Crop Evolution.

[20]  B. Kilian,et al.  Genetic Diversity and Population Structure in a Legacy Collection of Spring Barley Landraces Adapted to a Wide Range of Climates , 2014, PloS one.

[21]  Z. Talukder,et al.  Polymorphism study in barley (Hordeum vulgare) genotypes using microsatellite (SSR) markers. , 2014 .

[22]  Jens Keilwagen,et al.  Separating the wheat from the chaff – a strategy to utilize plant genetic resources from ex situ genebanks , 2014, Scientific Reports.

[23]  R. Terauchi,et al.  Harvesting the Promising Fruits of Genomics: Applying Genome Sequencing Technologies to Crop Breeding , 2014, PLoS biology.

[24]  Guo-ping Zhang,et al.  Development and Characterization of Polymorphic EST-SSR and Genomic SSR Markers for Tibetan Annual Wild Barley , 2014, PloS one.

[25]  Gary J. Muehlbauer,et al.  The USDA Barley Core Collection: Genetic Diversity, Population Structure, and Potential for Genome-Wide Association Studies , 2014, PloS one.

[26]  A. Casas,et al.  Spanish barley landraces outperform modern cultivars at low-productivity sites , 2014 .

[27]  Y. Lei,et al.  Genetic Diversity and Population Structure of the Major Peanut (Arachis hypogaea L.) Cultivars Grown in China by SSR Markers , 2014, PloS one.

[28]  R. Waugh,et al.  Genetic Diversity and Ecological Niche Modelling of Wild Barley: Refugia, Large-Scale Post-LGM Range Expansion and Limited Mid-Future Climate Threats? , 2014, PloS one.

[29]  A. Giardini,et al.  Population Structure of Barley Landrace Populations and Gene-Flow with Modern Varieties , 2013, PloS one.

[30]  L. Milella,et al.  Analysis of the Genetic Structure of a Barley Collection Using DNA Diversity Array Technology (DArT) , 2013, Plant Molecular Biology Reporter.

[31]  J. Léon,et al.  Spatial and temporal genetic analyses of Ethiopian barley (Hordeum vulgare L.) landraces reveal the absence of a distinct population structure , 2012, Genetic Resources and Crop Evolution.

[32]  B. vonHoldt,et al.  STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method , 2012, Conservation Genetics Resources.

[33]  E. Nevo,et al.  Tibet is one of the centers of domestication of cultivated barley , 2012, Proceedings of the National Academy of Sciences.

[34]  Wei Li,et al.  Genetic Diversity and Population Structure of Chinese Foxtail Millet [Setaria italica (L.) Beauv.] Landraces , 2012, G3: Genes | Genomes | Genetics.

[35]  L. Zou,et al.  Genetic diversity analysis of barley landraces and cultivars in the Shanghai region of China. , 2012, Genetics and molecular research : GMR.

[36]  F. V. van Eeuwijk,et al.  Genome-wide association studies for agronomical traits in a world wide spring barley collection , 2012, BMC Plant Biology.

[37]  M. E. Pè,et al.  Exploring the genetic diversity of Ethiopian grass pea (Lathyrus sativus L.) using EST-SSR markers , 2011, Molecular Breeding.

[38]  B. Mirza,et al.  Genetic differentiation and geographical Relationship of Asian barley landraces using SSRs , 2011, Genetics and molecular biology.

[39]  H. Cai,et al.  Genetic diversity analysis and transferability of cereal EST-SSR markers to orchardgrass (Dactylis glomerata L.) , 2010 .

[40]  J. Léon,et al.  Morphological diversity of Ethiopian barley (Hordeum vulgare L.) in relation to geographic regions and altitudes. , 2010, Hereditas.

[41]  E. Bitocchi,et al.  Adaptation and diversity along an altitudinal gradient in Ethiopian barley (Hordeum vulgare L.) landraces revealed by molecular analysis , 2010, BMC Plant Biology.

[42]  Timothy J. Close,et al.  Population Structure and Linkage Disequilibrium in U.S. Barley Germplasm: Implications for Association Mapping , 2010 .

[43]  N. Kandemir,et al.  Determining the levels of genetic variation using SSR markers in three Turkish barley materials known as Tokak , 2010, Turkish Journal of Agriculture and Forestry.

[44]  A. Jahoor,et al.  Genetic diversity and population structure of wild and cultivated barley from West Asia and North Africa , 2009 .

[45]  Chengdao Li,et al.  Comparative analysis of genetic diversity between Qinghai-Tibetan wild and Chinese landrace barley. , 2009, Genome.

[46]  S. Hamza,et al.  Genetic diversity in local barley accessions collected from different geographical regions of Tunisia , 2009, Plant Genetic Resources.

[47]  D. Prada Molecular population genetics and agronomic alleles in seed banks: searching for a needle in a haystack? , 2009, Journal of experimental botany.

[48]  A. Yahyaoui,et al.  High genetic diversity revealed in barley (Hordeum vulgare) collected from small-scale farmer’s fields in Eritrea , 2009, Genetic Resources and Crop Evolution.

[49]  S. Ceccarelli,et al.  Genetic diversity of ICARDA’s worldwide barley landrace collection , 2008, Genetic Resources and Crop Evolution.

[50]  Noah A. Rosenberg,et al.  CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure , 2007, Bioinform..

[51]  J. Crossa,et al.  Variation in partial resistance to barley leaf rust (Puccinia hordei) and agronomic characters of Ethiopian landrace lines , 2007, Euphytica.

[52]  P. Langridge,et al.  A high density barley microsatellite consensus map with 775 SSR loci , 2007, Theoretical and Applied Genetics.

[53]  E. Nevo,et al.  Adaptive climatic molecular evolution in wild barley at the Isa defense locus , 2007, Proceedings of the National Academy of Sciences.

[54]  R. Varshney,et al.  A high-density consensus map of barley to compare the distribution of QTLs for partial resistance to Puccinia hordei and of defence gene homologues , 2007, Theoretical and Applied Genetics.

[55]  Bruce D. Smith,et al.  The Molecular Genetics of Crop Domestication , 2006, Cell.

[56]  W. Friedt,et al.  Genetic relatedness and population differentiation of Himalayan hulless barley (Hordeum vulgare L.) landraces inferred with SSRs , 2006, Theoretical and Applied Genetics.

[57]  Arndt von Haeseler,et al.  Haplotype structure at seven barley genes: relevance to gene pool bottlenecks, phylogeny of ear type and site of barley domestication , 2006, Molecular Genetics and Genomics.

[58]  L. Qiu,et al.  Genetic Diversity of Chinese Cultivated Soybean Revealed by SSR Markers , 2006 .

[59]  P. Smouse,et al.  genalex 6: genetic analysis in Excel. Population genetic software for teaching and research , 2006 .

[60]  M. Ganal,et al.  Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.) , 2006, BMC Genetics.

[61]  B. Gill,et al.  Inheritance and molecular mapping of new greenbug resistance genes in wheat germplasms derived from Aegilops tauschii , 2005, Theoretical and Applied Genetics.

[62]  G. Evanno,et al.  Detecting the number of clusters of individuals using the software structure: a simulation study , 2005, Molecular ecology.

[63]  Kejun Liu,et al.  PowerMarker: an integrated analysis environment for genetic marker analysis , 2005, Bioinform..

[64]  P. Langridge,et al.  A simple hybridization-based strategy for the generation of non-redundant EST collections—a case study in barley (Hordeum vulgare L.) , 2004 .

[65]  F. Ordon,et al.  A novel major gene on chromosome 6H for resistance of barley against the barley yellow dwarf virus , 2004, Theoretical and Applied Genetics.

[66]  S. Kalinowski Counting Alleles with Rarefaction: Private Alleles and Hierarchical Sampling Designs , 2004, Conservation Genetics.

[67]  Allan Booth,et al.  A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome. , 2004, Genome.

[68]  R. Yadav A combined source of resistance against corn leaf aphid and yellow rust in barley , 2003 .

[69]  M. Stephens,et al.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. , 2003, Genetics.

[70]  E. Nevo,et al.  Ecological-genomic diversity of microsatellites in wild barley, Hordeum spontaneum, populations in Jordan , 2003, Theoretical and Applied Genetics.

[71]  E. Nevo,et al.  AFLP genetic polymorphism in wild barley (Hordeum spontaneum) populations in Israel , 2003, Theoretical and Applied Genetics.

[72]  Andrea Brandolini,et al.  Genetics and geography of wild cereal domestication in the near east , 2002, Nature Reviews Genetics.

[73]  Eviatar Nevo,et al.  Analysis of simple sequence repeats (SSRs) in wild barley from the Fertile Crescent: associations with ecology, geography and flowering time , 2002, Plant Molecular Biology.

[74]  N. Marmiroli,et al.  Genomic analysis of cultivated barley (Hordeum vulgare) using sequence-tagged molecular markers. Estimates of divergence based on RFLP and PCR markers derived from stress-responsive genes, and simple-sequence repeats (SSRs) , 2002, Molecular Genetics and Genomics.

[75]  W. Powell,et al.  A representative, highly informative ’genotyping set’ of barley SSRs , 2001, Theoretical and Applied Genetics.

[76]  R. von Bothmer,et al.  Genetic diversity in European accessions of the Barley Core Collection as detected by isozyme electrophoresis , 2000, Genetic Resources and Crop Evolution.

[77]  M. Morgante,et al.  A simple sequence repeat-based linkage map of barley. , 2000, Genetics.

[78]  R. Varshney,et al.  The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat , 2000, Euphytica.

[79]  Youyong Zhu,et al.  Genetic diversity and disease control in rice , 2000, Nature.

[80]  Matthew Stephens,et al.  Inference of population structure using multilocus genotype data. , 2000, Genetics.

[81]  F. Salamini,et al.  On the origin and domestication history of Barley (Hordeum vulgare). , 2000, Molecular biology and evolution.

[82]  P. Gouyon,et al.  Effects of colonization processes on genetic diversity: differences between annual plants and tree species. , 2000, Genetics.

[83]  D. Zohary Monophyletic vs. polyphyletic origin of the crops on which agriculture was founded in the Near East , 1999, Genetic Resources and Crop Evolution.

[84]  E. Nevo Genetic diversity in wild cereals: regional and local studies and their bearing on conservation ex situ and in situ , 1998, Genetic Resources and Crop Evolution.

[85]  D. Struss,et al.  The use of microsatellite markers for detection of genetic diversity in barley populations , 1998, Theoretical and Applied Genetics.

[86]  J. A. Webster,et al.  Insect Resistance in Barley Germplasm , 1998, Global Plant Genetic Resources for Insect-Resistant Crops.

[87]  E. Nevo,et al.  AFLP variation in wild barley (Hordeum spontaneum C. Koch) with reference to salt tolerance and associated ecogeography. , 1997, Genome.

[88]  E. Nevo,et al.  Genetic diversity in wild barley (Hordeum spontaneum C. Koch) in the Near East: a molecular analysis using Random Amplified Polymorphic DNA (RAPD) markers , 1997, Genetic Resources and Crop Evolution.

[89]  E. Nevo,et al.  Natural selection causes microscale allozyme diversity in wild barley and a lichen at ‘Evolution Canyon’, Mt. Carmel, Israel , 1997, Heredity.

[90]  W. Powell,et al.  Polymorphism revealed by simple sequence repeats , 1996 .

[91]  M. Heun,et al.  Barley microsatellites: allele variation and mapping , 1995, Plant Molecular Biology.

[92]  M. Maroof,et al.  Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[93]  D. Kudrna,et al.  A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome , 1993, Theoretical and Applied Genetics.

[94]  T. Fukuyama,et al.  Survey of Resistance to Scald in World Collections of Cultivated Barley , 1992 .

[95]  J. Hamrick,et al.  Factors influencing levels of genetic diversity in woody plant species , 1992, New Forests.

[96]  A. Graner,et al.  Construction of an RFLP map of barley , 1991, Theoretical and Applied Genetics.

[97]  M. Arabi Inheritance of partial resistance to spot blotch in barley , 1990 .

[98]  M. Slatkin,et al.  A Quasi-equilibrium theory of the distribution of rare alleles in a subdivided population , 1986, Heredity.

[99]  R. Jorgensen,et al.  Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. , 1984, Proceedings of the National Academy of Sciences of the United States of America.

[100]  D. Botstein,et al.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms. , 1980, American journal of human genetics.

[101]  D. Metcalfe,et al.  RESISTANCE IN BARLEY TO THE CORN LEAF APHID RHOPALOSIPHUM MAIDIS , 1977 .

[102]  W. R. Young,et al.  Control of Corn Leaf Aphid on Barley in India , 1973 .

[103]  D. Zohary,et al.  Distribution of Wild Wheats and Barley , 1966, Science.

[104]  A. Robinson,et al.  FURTHER STUDIES ON RESISTANCE OF BARLEY VARIETIES TO THE APHID RHOPALOSIPHUM PADI (L.) , 1963 .

[105]  A. Robinson,et al.  RESISTANCE OF BARLEY VARIETIES TO THE APHID RHOPALOSIPHUM PADI (L.) , 1962 .

[106]  Abhay Kumar,et al.  Screening of the barley germplasm/varieties against barley aphid (Rhopalosiphum maidis) Fitch , 2020 .

[107]  I. Qrunfleh,et al.  Microsatellite analysis of genetic diversity and population structure of Jordanian barley (Hordeum vulgare L.) reveals genetic polymorphism and divergence associated with inflorescence type , 2018 .

[108]  Ohman,et al.  POLYMORPHISM STUDY IN BARLEY ( Hordeum vulgare ) GENOTYPES USING MICROSATELLITE ( SSR ) MARKERS , 2014 .

[109]  A. Flavell,et al.  Structural and temporal variation in the genetic diversity of a European collection of spring two-row barley cultivars and utility for association mapping of quantitative traits , 2013 .

[110]  Theunis Piersma,et al.  The interplay between habitat availability and population differentiation , 2012 .

[111]  H. Singh Bio-ecology and Management of Aphid, Rhopalosiphum maidis (Fitch) on Barley, Hordeum vulgare Linn. , 2011 .

[112]  Han Zhang,et al.  Genetic diversity in Chinese sorghum landraces revealed by chloroplast simple sequence repeats , 2009, Genetic Resources and Crop Evolution.

[113]  Sarvjeet Singh,et al.  Screening and identification of sources of resistance against corn leaf aphid (Rhopalosiphum maidis Fitch.) in barley , 2009 .

[114]  L. Ramsay,et al.  Patterns of genetic and eco-geographical diversity in Spanish barleys , 2007, Theoretical and Applied Genetics.

[115]  Harsh Singh,et al.  Screening of Barley (Hordeum Vulgare) Germplasm Against Corn Leaf Aphid, Rhopalosiphum Maidis (Fitch.) , 2006 .

[116]  M. C. Edwards,et al.  Natural Resistance Mechanisms to Viruses in Barley , 2006 .

[117]  Andreas Graner,et al.  Genic microsatellite markers in plants: features and applications. , 2005, Trends in biotechnology.

[118]  I. Jørgensen,et al.  Discovery, characterization and exploitation of Mlo powdery mildew resistance in barley , 2004, Euphytica.

[119]  A. Rebaï,et al.  SSR-based genetic diversity assessment among Tunisian winter barley and relationship with morphological traits , 2004, Euphytica.

[120]  A. Habekuss,et al.  Chapter 8 Diversity in resistance to biotic stresses , 2003 .

[121]  O Hammer-Muntz,et al.  PAST: paleontological statistics software package for education and data analysis version 2.09 , 2001 .

[122]  D. C. Gordon,et al.  Wild barley: a source of genes for crop improvement in the 21st century? , 2000, Journal of experimental botany.

[123]  A. Kleinhofs,et al.  Restriction Fragment Length Polymorphisms in Landrace Barleys from Ethiopia in Relation to Geographic, Altitude, and Agro-Ecological Factors , 1998 .

[124]  A. Verma,et al.  Yield losses caused by the aphid, Rhopalosiphum maidis (Fitch.) in different varieties/strains of barley crop. , 1982 .

[125]  S. Gulati,et al.  Inheritance of Resistance to Corn Leaf Aphid in Barley , 1978 .

[126]  S. Gulati,et al.  Aphid resistance in barley , 1968 .