On the genealogy of nested subsamples from a haploid population

For the haploid genetic model of Moran, the joint distribution of the numbers of distinct ancestors of a collection of nested subsamples is derived. These results are shown to apply to the diffusion approximations of a wide variety of other genetic models, including the Wright–Fisher process. The results allow us to relate the ancestries of populations sampled at different times. Analogous results for a line-of-descent process that incorporates the effect of mutation are given. Some results about the ages of alleles in an infinite-alleles model are described.

[1]  S. Tavaré,et al.  Line-of-descent and genealogical processes, and their applications in population genetics models. , 1984, Theoretical population biology.

[2]  Simon Tavaré,et al.  Lines-of-descent and genealogical processes, and their applications in population genetics models , 1984, Advances in Applied Probability.

[3]  G. A. Watterson Mutant substitutions at linked nucleotide sites , 1982, Advances in Applied Probability.

[4]  G. A. Watterson Substitution times for mutant nucleotides , 1982, Journal of Applied Probability.

[5]  J. Kingman On the genealogy of large populations , 1982, Journal of Applied Probability.

[6]  F. Spitzer Reversibility and Stochastic Networks (F. P. Kelly) , 1981 .

[7]  J. Kingman,et al.  Mathematics of genetic diversity , 1982 .

[8]  R. Griffiths,et al.  Lines of descent in the diffusion approximation of neutral Wright-Fisher models. , 1980, Theoretical population biology.

[9]  C. J-F,et al.  THE COALESCENT , 1980 .

[10]  F. Kelly Reversibility and Stochastic Networks , 1980 .

[11]  Keith Gladstien,et al.  The Characteristic Values and Vectors for a Class of Stochastic Matrices Arising in Genetics , 1978 .

[12]  F. Kelly Exact results for the Moran neutral allele model , 1977, Advances in Applied Probability.

[13]  P. Jagers Branching processes and cell proliferation — a survey , 1977, Advances in Applied Probability.

[14]  G. A. Watterson,et al.  Is the most frequent allele the oldest? , 1977, Theoretical population biology.

[15]  G. A. Watterson On the number of segregating sites in genetical models without recombination. , 1975, Theoretical population biology.

[16]  C. Cannings The latent roots of certain Markov chains arising in genetics: A new approach, II. Further haploid models , 1974, Advances in Applied Probability.

[17]  C. Cannings The latent roots of certain Markov chains arising in genetics: A new approach, I. Haploid models , 1974, Advances in Applied Probability.

[18]  W. Ewens The sampling theory of selectively neutral alleles. , 1972, Theoretical population biology.

[19]  J. Felsenstein The rate of loss of multiple alleles in finite haploid populations. , 1971, Theoretical population biology.

[20]  Irene A. Stegun,et al.  Handbook of Mathematical Functions. , 1966 .

[21]  P. A. P. Moran,et al.  Random processes in genetics , 1958, Mathematical Proceedings of the Cambridge Philosophical Society.