The mechanics of ribosomal translocation.
暂无分享,去创建一个
[1] Daniel N. Wilson,et al. Deacylated tRNA is released from the E site upon A site occupation but before GTP is hydrolyzed by EF-Tu , 2005, Nucleic acids research.
[2] K. Nierhaus,et al. Kinetic and thermodynamic parameters for tRNA binding to the ribosome and for the translocation reaction. , 1992, The Journal of biological chemistry.
[3] Shigeyuki Yokoyama,et al. Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. , 2007, Molecular cell.
[4] A. Liljas,et al. Three‐dimensional structure of the ribosomal translocase: elongation factor G from Thermus thermophilus. , 1994, The EMBO journal.
[5] Sarah E. Walker,et al. Ribosomal translocation: one step closer to the molecular mechanism. , 2009, ACS chemical biology.
[6] E. Westhof,et al. A new understanding of the decoding principle on the ribosome , 2012, Nature.
[7] C. Brooks,et al. Flipping of the ribosomal A-site adenines provides a basis for tRNA selection. , 2014, Journal of molecular biology.
[8] Joachim Frank,et al. Locking and Unlocking of Ribosomal Motions , 2003, Cell.
[9] Prashant K. Khade,et al. Steric complementarity in the decoding center is important for tRNA selection by the ribosome. , 2013, Journal of molecular biology.
[10] Frank McCormick,et al. The GTPase superfamily: conserved structure and molecular mechanism , 1991, Nature.
[11] Harry F Noller,et al. Crystal Structures of EF-G–Ribosome Complexes Trapped in Intermediate States of Translocation , 2013, Science.
[12] N. Polacek,et al. Ribosome-associated GTPases: The role of RNA for GTPase activation , 2010, RNA biology.
[13] J. Holton,et al. Structures of the Bacterial Ribosome at 3.5 Å Resolution , 2005, Science.
[14] James B. Munro,et al. Structure and dynamics of the mammalian ribosomal pretranslocation complex. , 2011, Molecular cell.
[15] K. Nierhaus,et al. The Elongation Factor 3 Unique in Higher Fungi and Essential for Protein Biosynthesis Is an E Site Factor (*) , 1995, The Journal of Biological Chemistry.
[16] Jamie H. D. Cate,et al. Control of Ribosomal Subunit Rotation by Elongation Factor G , 2013, Science.
[17] Zigurts K. Majumdar,et al. The antibiotic viomycin traps the ribosome in an intermediate state of translocation , 2007, Nature Structural &Molecular Biology.
[18] I. Wool,et al. The site of action of alpha-sarcin on eukaryotic ribosomes. The sequence at the alpha-sarcin cleavage site in 28 S ribosomal ribonucleic acid. , 1982, The Journal of biological chemistry.
[19] M. Yusupov,et al. Structural aspects of messenger RNA reading frame maintenance by the ribosome , 2010, Nature Structural &Molecular Biology.
[20] Daniel N. Wilson. The A–Z of bacterial translation inhibitors , 2009, Critical reviews in biochemistry and molecular biology.
[21] Yonggui Gao,et al. Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex , 2013, PloS one.
[22] R. Hilgenfeld,et al. Crystal structure of active elongation factor Tu reveals major domain rearrangements , 1993, Nature.
[23] David S. Tourigny,et al. Elongation Factor G Bound to the Ribosome in an Intermediate State of Translocation , 2013, Science.
[24] Måns Ehrenberg,et al. Peptidyl-tRNA Regulates the GTPase Activity of Translation Factors , 2003, Cell.
[25] K. Nierhaus. Question 6: Early Steps of Evolution and Some Ideas About a Simplified Translational Machinery , 2007, Origins of Life and Evolution of Biospheres.
[26] V. Ramakrishnan,et al. Recognition of Cognate Transfer RNA by the 30S Ribosomal Subunit , 2001, Science.
[27] B. Cooperman,et al. Kinetically competent intermediates in the translocation step of protein synthesis. , 2007, Molecular cell.
[28] G. Sander. Ribosomal protein L1 from Escherichia coli. Its role in the binding of tRNA to the ribosome and in elongation factor g-dependent gtp hydrolysis. , 1983, The Journal of biological chemistry.
[29] Xin Sheng Zhao,et al. EF-G catalyzes tRNA translocation by disrupting interactions between decoding center and codon–anticodon duplex , 2014, Nature Structural &Molecular Biology.
[30] H. Rheinberger,et al. Testing an alternative model for the ribosomal peptide elongation cycle. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[31] T. Mielke,et al. Regulation of the Mammalian Elongation Cycle by Subunit Rolling: A Eukaryotic-Specific Ribosome Rearrangement , 2014, Cell.
[32] A. Kelley,et al. The Mechanism for Activation of GTP Hydrolysis on the Ribosome , 2010, Science.
[33] E. Dabbs,et al. Functional studies on ribosomes lacking protein L1 from mutant Escherichia coli. , 1980, European journal of biochemistry.
[34] J. Bodley,et al. Formation of the ribosome-G factor-GDP complex in the presence of fusidic acid. , 1969, Biochemical and biophysical research communications.
[35] H. Noller,et al. Molecular mechanics of 30S subunit head rotation , 2014, Proceedings of the National Academy of Sciences.
[36] M. Rodnina,et al. Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome , 1997, Nature.
[37] James B. Munro,et al. Spontaneous formation of the unlocked state of the ribosome is a multistep process , 2009, Proceedings of the National Academy of Sciences.
[38] Joachim Frank,et al. A ratchet-like inter-subunit reorganization of the ribosome during translocation , 2000, Nature.
[39] Yong-Gui Gao,et al. The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State , 2009, Science.
[40] Joachim Frank,et al. Visualization of Trna Movements on the Escherichia coli 70s Ribosome during the Elongation Cycle , 2000, The Journal of cell biology.
[41] H. Noller,et al. Catalysis of Ribosomal Translocation by Sparsomycin , 2003, Science.
[42] Klaus Schulten,et al. Structural characterization of mRNA-tRNA translocation intermediates , 2012, Proceedings of the National Academy of Sciences.
[43] Takuya Ueda,et al. 70S-scanning initiation is a novel and frequent initiation mode of ribosomal translation in bacteria , 2016, Proceedings of the National Academy of Sciences.
[44] H. Noller,et al. Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome. , 2012, RNA.
[45] Taekjip Ha,et al. Following movement of the L1 stalk between three functional states in single ribosomes , 2009, Proceedings of the National Academy of Sciences.
[46] Ruben L. Gonzalez,et al. Coupling of Ribosomal L1 Stalk and tRNA Dynamics during Translation Elongation , 2009 .
[47] T. Ueda,et al. [EF-G2mt is an exclusive recycling factor in mammalian mitochondrial protein synthesis]. , 2010, Seikagaku. The Journal of Japanese Biochemical Society.
[48] K. Nierhaus,et al. Evidence that the G2661 region of 23S rRNA is located at the ribosomal binding sites of both elongation factors. , 1987, Biochimie.
[49] Prashant K. Khade,et al. Messenger RNA interactions in the decoding center control the rate of translocation , 2011, Nature Structural &Molecular Biology.
[50] H. Noller,et al. How the ribosome hands the A-site tRNA to the P site during EF-G–catalyzed translocation , 2014, Science.
[51] J. Achenbach,et al. Translocation at work , 2013, Nature Structural &Molecular Biology.
[52] N. Seeman,et al. Sequence-specific Recognition of Double Helical Nucleic Acids by Proteins (base Pairs/hydrogen Bonding/recognition Fidelity/ion Binding) , 2022 .
[53] Yonggui Gao,et al. Structure of EF-G–ribosome complex in a pretranslocation state , 2013, Nature Structural &Molecular Biology.
[54] N. Grigorieff,et al. Structure of the ribosome with elongation factor G trapped in the pretranslocation state , 2013, Proceedings of the National Academy of Sciences.
[55] Wolfgang Wintermeyer,et al. Conformational changes of the small ribosomal subunit during elongation factor G-dependent tRNA-mRNA translocation. , 2004, Journal of molecular biology.
[56] H. Noller,et al. Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation , 2013, Proceedings of the National Academy of Sciences.