Selection of Protein-Protein Interactions of Desired Affinities with a Bandpass Circuit.

[1]  T. S. Lim,et al.  Phage Display , 2018, Methods in Molecular Biology.

[2]  David Baker,et al.  High-throughput characterization of protein–protein interactions by reprogramming yeast mating , 2017, Proceedings of the National Academy of Sciences.

[3]  A. Keating,et al.  Combinatorial bZIP dimers display complex DNA-binding specificity landscapes , 2017, eLife.

[4]  Omer Dushek,et al.  Architecture of a minimal signaling pathway explains the T-cell response to a 1 million-fold variation in antigen affinity and dose , 2016, Proceedings of the National Academy of Sciences.

[5]  M. Shoichet,et al.  Designer protein delivery: From natural to engineered affinity-controlled release systems , 2016, Science.

[6]  J. Karanicolas,et al.  Optogenetic Inhibitor of the Transcription Factor CREB. , 2015, Chemistry & biology.

[7]  B. Berks.  The twin-arginine protein translocation pathway. , 2015, Annual review of biochemistry.

[8]  Amy E Keating,et al.  SORTCERY-A High-Throughput Method to Affinity Rank Peptide Ligands. , 2014, Journal of molecular biology.

[9]  Trushar R. Patel,et al.  The beta-Lactamase Gene Regulator AmpR Is a Tetramer That Recognizes and Binds the d-Ala-d-Ala Motif of Its Repressor UDP-N-acetylmuramic Acid (MurNAc)-pentapeptide. , 2014 .

[10]  Trushar R. Patel,et al.  The β-Lactamase Gene Regulator AmpR Is a Tetramer That Recognizes and Binds the d-Ala-d-Ala Motif of Its Repressor UDP-N-acetylmuramic Acid (MurNAc)-pentapeptide* , 2014, The Journal of Biological Chemistry.

[11]  J. Thaxton,et al.  To affinity and beyond: Harnessing the T Cell receptor for cancer immunotherapy , 2014, Human vaccines & immunotherapeutics.

[12]  K. Lage.  Protein-protein interactions and genetic diseases: The interactome. , 2014, Biochimica et biophysica acta.

[13]  M. DeLisa,et al.  Optimizing recombinant antibodies for intracellular function using hitchhiker-mediated survival selection. , 2014, Protein engineering, design & selection : PEDS.

[14]  Roshani Patel,et al.  Protein transport by the bacterial Tat pathway. , 2014, Biochimica et biophysica acta.

[15]  Jenifer B. Kaplan,et al.  Increasing the affinity of selective bZIP‐binding peptides through surface residue redesign , 2014, Protein science : a publication of the Protein Society.

[16]  Jun Lin,et al.  Beta-lactamase induction and cell wall metabolism in Gram-negative bacteria , 2013, Front. Microbiol..

[17]  K. Müller,et al.  TAT hitchhiker selection expanded to folding helpers, multimeric interactions and combinations with protein fragment complementation. , 2013, Protein engineering, design & selection : PEDS.

[18]  W. Edelmann,et al.  SLiCE: a novel bacterial cell extract-based DNA cloning method , 2012, Nucleic acids research.

[19]  M. Davidson,et al.  An Enhanced Monomeric Blue Fluorescent Protein with the High Chemical Stability of the Chromophore , 2011, PloS one.

[20]  Gideon Schreiber,et al.  Protein binding specificity versus promiscuity. , 2010, Current opinion in structural biology.

[21]  Jonathan G. Lees,et al.  Transient protein-protein interactions: structural, functional, and network properties. , 2010, Structure.

[22]  J. Slansky,et al.  The Goldilocks Model for TCR—Too Much Attraction Might Not Be Best for Vaccine Design , 2010, PLoS biology.

[23]  J. Boeke,et al.  Silent information regulator 3: the Goldilocks of the silencing complex. , 2010, Genes & development.

[24]  Marc Ostermeier,et al.  Morphogen-defined patterning of Escherichia coli enabled by an externally tunable band-pass filter , 2009, Journal of biological engineering.

[25]  C. Townsend,et al.  An externally tunable bacterial band-pass filter , 2009, Proceedings of the National Academy of Sciences.

[26]  D. G. Gibson,et al.  Enzymatic assembly of DNA molecules up to several hundred kilobases , 2009, Nature Methods.

[27]  M. DeLisa,et al.  Versatile selection technology for intracellular protein–protein interactions mediated by a unique bacterial hitchhiker transport mechanism , 2009, Proceedings of the National Academy of Sciences.

[28]  K. Müller,et al.  Selectional and mutational scope of peptides sequestering the Jun-Fos coiled-coil domain. , 2008, Journal of molecular biology.

[29]  G. Georgiou,et al.  A bacterial two‐hybrid system based on the twin‐arginine transporter pathway of E. coli , 2007, Protein science : a publication of the Protein Society.

[30]  K. Müller,et al.  Considerations in the design and optimization of coiled coil structures. , 2007, Methods in molecular biology.

[31]  Mark A. Schmitz,et al.  Semirational design of Jun-Fos coiled coils with increased affinity: Universal implications for leucine zipper prediction and design. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[32]  Adam C. Fisher,et al.  Genetic selection for protein solubility enabled by the folding quality control feature of the twin‐arginine translocation pathway , 2006, Protein science : a publication of the Protein Society.

[33]  J. Matthews,et al.  Protein-protein interactions in human disease. , 2005, Current opinion in structural biology.

[34]  P. Angel,et al.  AP-1 subunits: quarrel and harmony among siblings , 2004, Journal of Cell Science.

[35]  K. Arndt,et al.  Coiled Coil Domains: Stability, Specificity, and Biological Implications , 2004, Chembiochem : a European journal of chemical biology.

[36]  J. Thornton,et al.  Diversity of protein–protein interactions , 2003, The EMBO journal.

[37]  A. Plückthun,et al.  Comparison of in vivo selection and rational design of heterodimeric coiled coils. , 2002, Structure.

[38]  A. Plückthun,et al.  A heterodimeric coiled-coil peptide pair selected in vivo from a designed library-versus-library ensemble. , 2000, Journal of molecular biology.

[39]  K. Wittrup,et al.  Fine Affinity Discrimination by Yeast Surface Display and Flow Cytometry , 2000, Biotechnology progress.

[40]  Matthias Müller,et al.  Co-translocation of a Periplasmic Enzyme Complex by a Hitchhiker Mechanism through the Bacterial Tat Pathway* , 1999, The Journal of Biological Chemistry.

[41]  D. Ginty,et al.  A Dominant-Negative Inhibitor of CREB Reveals that It Is a General Mediator of Stimulus-Dependent Transcription of c-fos , 1998, Molecular and Cellular Biology.

[42]  C. Vinson,et al.  Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil. , 1997, Biochemistry.

[43]  B. Wiedemann,et al.  The signal molecule for beta-lactamase induction in Enterobacter cloacae is the anhydromuramyl-pentapeptide , 1997, Antimicrobial agents and chemotherapy.

[44]  M. Olive,et al.  A Dominant Negative to Activation Protein-1 (AP1) That Abolishes DNA Binding and Inhibits Oncogenesis* , 1997, The Journal of Biological Chemistry.

[45]  M. Olive,et al.  Extending dimerization interfaces: the bZIP basic region can form a coiled coil. , 1995, The EMBO journal.

[46]  R. Brent,et al.  Correlation of two-hybrid affinity data with in vitro measurements , 1995, Molecular and cellular biology.

[47]  S. Lindquist,et al.  Inactivation of the ampD gene causes semiconstitutive overproduction of the inducible Citrobacter freundii beta-lactamase , 1987, Journal of bacteriology.

[48]  S. Normark,et al.  Regulatory components in Citrobacter freundii ampC beta-lactamase induction. , 1985, Proceedings of the National Academy of Sciences of the United States of America.