Identifying mRNA sequence elements for target recognition by human Argonaute proteins
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T. Hughes | D. Ray | Zhaolei Zhang | Jingjing Li | R. Nutiu | TaeHyung Kim
[1] Brendan J. Frey,et al. A compendium of RNA-binding motifs for decoding gene regulation , 2013, Nature.
[2] D. Tollervey,et al. Mapping the Human miRNA Interactome by CLASH Reveals Frequent Noncanonical Binding , 2013, Cell.
[3] G. Hannon,et al. The Structure of Human Argonaute-2 in Complex with miR-20a , 2012, Cell.
[4] M. Zavolan,et al. A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins , 2011, Nature Methods.
[5] R. Darnell,et al. Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data , 2011, Nature Biotechnology.
[6] Ali Nahvi,et al. A Parsimonious Model for Gene Regulation by miRNAs , 2011, Science.
[7] Grace X. Y. Zheng,et al. Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs , 2010, Nature Structural &Molecular Biology.
[8] Wei Yang,et al. Mechanism of MicroRNA-Target Interaction: Molecular Dynamics Simulations and Thermodynamics Analysis , 2010, PLoS Comput. Biol..
[9] N. Sonenberg,et al. Structural basis for 5′-nucleotide base-specific recognition of guide RNA by human AGO2 , 2010, Nature.
[10] Quaid Morris,et al. Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure. , 2010, RNA.
[11] Scott B. Dewell,et al. Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP , 2010, Cell.
[12] M. Kiebler,et al. Faculty Opinions recommendation of Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. , 2009 .
[13] Lourdes Peña Castillo,et al. Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins , 2009, Nature Biotechnology.
[14] D. Bartel. MicroRNAs: Target Recognition and Regulatory Functions , 2009, Cell.
[15] T. Tuschl,et al. Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex , 2008, Nature.
[16] M. Zavolan,et al. Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs. , 2008, RNA.
[17] Stefan L Ameres,et al. The impact of target site accessibility on the design of effective siRNAs , 2008, Nature Biotechnology.
[18] Gregory J. Hannon,et al. Sorting of Small RNAs into Arabidopsis Argonaute Complexes Is Directed by the 5′ Terminal Nucleotide , 2008, Cell.
[19] G. Meister,et al. The Argonaute protein family , 2008, Genome Biology.
[20] Timothy L. Bailey,et al. Discriminative motif discovery in DNA and protein sequences using the DEME algorithm , 2007, BMC Bioinformatics.
[21] L. Lim,et al. MicroRNA targeting specificity in mammals: determinants beyond seed pairing. , 2007, Molecular cell.
[22] Gunter Meister,et al. Argonaute proteins: mediators of RNA silencing. , 2007, Molecular cell.
[23] Peter F. Stadler,et al. Local RNA base pairing probabilities in large sequences , 2006, Bioinform..
[24] D. Haussler,et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. , 2005, Genome research.
[25] D. Barford,et al. Structural insights into mRNA recognition from a PIWI domain–siRNA guide complex , 2005, Nature.
[26] W. Filipowicz,et al. Tethering of human Ago proteins to mRNA mimics the miRNA-mediated repression of protein synthesis. , 2004, RNA.
[27] J. M. Thomson,et al. Argonaute2 Is the Catalytic Engine of Mammalian RNAi , 2004, Science.
[28] G. Hannon,et al. Crystal Structure of Argonaute and Its Implications for RISC Slicer Activity , 2004, Science.
[29] Michael Sattler,et al. Nucleic acid 3′-end recognition by the Argonaute2 PAZ domain , 2004, Nature Structural &Molecular Biology.
[30] D. Patel,et al. Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain , 2004, Nature.
[31] Terrence S. Furey,et al. The UCSC Table Browser data retrieval tool , 2004, Nucleic Acids Res..
[32] W. Wooster,et al. Crystal structure of , 2005 .