Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks
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Xiaoyu Zhang | S. Jacobsen | C. Gutiérrez | I. López-Vidriero | R. Solano | J. Oliveros | S. Feng | Hume Stroud | Yanchun Yu | A. Benguría | M. Sánchez | C. Costas | J. C. Oliveros
[1] Matthew W. Vaughn,et al. Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State , 2010, PLoS genetics.
[2] R. Gordân,et al. Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading. , 2010, Genome research.
[3] Neerja Karnani,et al. Genomic Study of Replication Initiation in Human Chromosomes Reveals the Influence of Transcription Regulation and Chromatin Structure on Origin Selection , 2010, Molecular biology of the cell.
[4] K. Struhl,et al. HBO1 histone acetylase activity is essential for DNA replication licensing and inhibited by Geminin. , 2010, Molecular cell.
[5] Kairong Cui,et al. H3.3/H2A.Z double variant-containing nucleosomes mark ‘nucleosome-free regions’ of active promoters and other regulatory regions in the human genome , 2009, Nature Genetics.
[6] Ramón Díaz-Uriarte,et al. Transcription Initiation Activity Sets Replication Origin Efficiency in Mammalian Cells , 2009, PLoS genetics.
[7] Edward J Oakeley,et al. Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome. , 2009, Genes & development.
[8] C. Gutiérrez,et al. Arabidopsis ORC1 is a PHD-containing H3K4me3 effector that regulates transcription , 2009, Proceedings of the National Academy of Sciences.
[9] A. Schepers,et al. Why are we where we are? Understanding replication origins and initiation sites in eukaryotes using ChIP-approaches , 2009, Chromosome Research.
[10] M. Prioleau,et al. Genome-wide approaches to determining origin distribution , 2009, Chromosome Research.
[11] M. Pellegrini,et al. Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana , 2009, Genome Biology.
[12] C. Gutiérrez,et al. Chromatin dynamics during the plant cell cycle. , 2008, Seminars in cell & developmental biology.
[13] S. Henikoff,et al. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks , 2008, Nature.
[14] Wing Hung Wong,et al. SeqMap: mapping massive amount of oligonucleotides to the genome , 2008, Bioinform..
[15] Laurent Duret,et al. Genome-wide studies highlight indirect links between human replication origins and gene regulation , 2008, Proceedings of the National Academy of Sciences.
[16] Clifford A. Meyer,et al. Model-based Analysis of ChIP-Seq (MACS) , 2008, Genome Biology.
[17] M. Pellegrini,et al. Genome-Wide Association of Histone H3 Lysine Nine Methylation with CHG DNA Methylation in Arabidopsis thaliana , 2008, PloS one.
[18] S. Nelson,et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning , 2008, Nature.
[19] F. Antequera,et al. Overreplication of short DNA regions during S phase in human cells. , 2008, Genes & development.
[20] E. Kipreos,et al. Control of the Cdc6 replication licensing factor in metazoa: The role of nuclear export and the CUL4 ubiquitin ligase , 2008, Cell cycle.
[21] C. Gutiérrez,et al. A green GEM: intriguing analogies with animal geminin. , 2007, Trends in cell biology.
[22] C. Pikaard,et al. In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. , 2007, The Plant journal : for cell and molecular biology.
[23] V. Gaudin,et al. The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation , 2007, Nature Structural &Molecular Biology.
[24] Mirit I. Aladjem,et al. Replication in context: dynamic regulation of DNA replication patterns in metazoans , 2007, Nature Reviews Genetics.
[25] David J Young,et al. High‐throughput mapping of origins of replication in human cells , 2007, EMBO reports.
[26] Neerja Karnani,et al. Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas. , 2007, Genome research.
[27] Crisanto Gutierrez,et al. A chromatin link that couples cell division to root epidermis patterning in Arabidopsis , 2007, Nature.
[28] Matteo Pellegrini,et al. Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis , 2007, PLoS biology.
[29] J. Blow,et al. The elusive determinants of replication origins , 2007, EMBO reports.
[30] Katsuhiko Shirahige,et al. Genome‐wide localization of pre‐RC sites and identification of replication origins in fission yeast , 2007, The EMBO journal.
[31] T. Orr-Weaver,et al. Developmentally regulated histone modifications in Drosophila follicle cells: initiation of gene amplification is associated with histone H3 and H4 hyperacetylation and H1 phosphorylation , 2007, Chromosoma.
[32] M. Pellegrini,et al. Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis , 2006, Cell.
[33] M. Méchali,et al. HoxB domain induction silences DNA replication origins in the locus and specifies a single origin at its boundary , 2006, EMBO reports.
[34] M. DePamphilis,et al. Regulating the licensing of DNA replication origins in metazoa. , 2006, Current opinion in cell biology.
[35] Andreas Houben,et al. Chromosomal histone modification patterns--from conservation to diversity. , 2006, Trends in plant science.
[36] M. Menges,et al. Synchronization, transformation, and cryopreservation of suspension-cultured cells. , 2006, Methods in molecular biology.
[37] Wing Hung Wong,et al. TileMap: create chromosomal map of tiling array hybridizations , 2005, Bioinform..
[38] R. Shiekhattar,et al. Cell cycle regulation of chromatin at an origin of DNA replication , 2005, The EMBO journal.
[39] David M MacAlpine,et al. Coordination of replication and transcription along a Drosophila chromosome. , 2004, Genes & development.
[40] F. Antequera. Genomic specification and epigenetic regulation of eukaryotic DNA replication origins , 2004, The EMBO journal.
[41] S. Gygi,et al. Recruitment of Xenopus Scc2 and cohesin to chromatin requires the pre-replication complex , 2004, Nature Cell Biology.
[42] David M. Gilbert,et al. In search of the holy replicator , 2004, Nature Reviews Molecular Cell Biology.
[43] Domenico Maiorano,et al. Specification of a DNA replication origin by a transcription complex , 2004, Nature Cell Biology.
[44] B. Calvi,et al. Chromatin regulates origin activity in Drosophila follicle cells , 2004, Nature.
[45] L. Hennig,et al. Genome-wide gene expression in an Arabidopsis cell suspension , 2003, Plant Molecular Biology.
[46] E. Meyerowitz,et al. The DNA of Arabidopsis thaliana , 1984, Molecular and General Genetics MGG.
[47] J. Hof,et al. The size and number of replicon families of chromosomal DNA of Arabidopsis thaliana , 1978, Chromosoma.
[48] Jasper Rine,et al. The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae. , 2003, Annual review of biochemistry.
[49] M. Prioleau,et al. Replication of the Chicken β-Globin Locus: Early-Firing Origins at the 5′ HS4 Insulator and the ρ- and βA-Globin Genes Show Opposite Epigenetic Modifications , 2003, Molecular and Cellular Biology.
[50] M. Prioleau,et al. Replication of the chicken beta-globin locus: early-firing origins at the 5' HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications. , 2003, Molecular and cellular biology.
[51] M. Menges,et al. Synchronous Arabidopsis suspension cultures for analysis of cell-cycle gene activity. , 2002, The Plant journal : for cell and molecular biology.
[52] John J. Wyrick,et al. Genome-Wide Distribution of ORC and MCM Proteins in S. cerevisiae: High-Resolution Mapping of Replication Origins , 2001, Science.
[53] C. Gutiérrez,et al. Expression and Stability of Arabidopsis CDC6 Are Associated with Endoreplication Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010329. , 2001, The Plant Cell Online.
[54] The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.
[55] M. Botchan,et al. Association of the Origin Recognition Complex with Heterochromatin and HP1 in Higher Eukaryotes , 1997, Cell.
[56] J. Murray,et al. A family of cyclin D homologs from plants differentially controlled by growth regulators and containing the conserved retinoblastoma protein interaction motif. , 1995, The Plant cell.
[57] Bruce Stillman,et al. ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex , 1992, Nature.
[58] A. Riggs,et al. On the mechanism of DNA replication in mammalian chromosomes. , 1968, Journal of molecular biology.