Distribution of CO2 fixation and acetate mineralization pathways in microorganisms from extremophilic anaerobic biotopes
暂无分享,去创建一个
[1] T. Tourova,et al. Fuchsiella alkaliacetigena gen. nov., sp. nov., an alkaliphilic, lithoautotrophic homoacetogen from a soda lake. , 2012, International journal of systematic and evolutionary microbiology.
[2] A. Oren,et al. Living with salt: metabolic and phylogenetic diversity of archaea inhabiting saline ecosystems. , 2012, FEMS microbiology letters.
[3] W. Martin. Hydrogen, metals, bifurcating electrons, and proton gradients: The early evolution of biological energy conservation , 2012, FEBS letters.
[4] N. Pimenov,et al. Sulfidogenesis in hypersaline chloride-sulfate lakes of Kulunda Steppe (Altai, Russia). , 2012, FEMS microbiology ecology.
[5] H. Morowitz,et al. What is an autotroph? , 2012, Archives of Microbiology.
[6] M. Lever. Acetogenesis in the Energy-Starved Deep Biosphere – A Paradox? , 2011, Front. Microbio..
[7] M. Klotz,et al. The Microbial Sulfur Cycle , 2011, Front. Microbio..
[8] G. Fuchs. Alternative pathways of carbon dioxide fixation: insights into the early evolution of life? , 2011, Annual review of microbiology.
[9] A. Oren. Thermodynamic limits to microbial life at high salt concentrations. , 2011, Environmental microbiology.
[10] R. Amils,et al. Methanogenesis in the sediments of Rio Tinto, an extreme acidic river. , 2011, Environmental microbiology.
[11] Yahai Lu,et al. Syntrophic acetate oxidation under thermophilic methanogenic condition in Chinese paddy field soil. , 2011, FEMS microbiology ecology.
[12] R. Amils,et al. Microbial Diversity in Anaerobic Sediments at Río Tinto, a Naturally Acidic Environment with a High Heavy Metal Content , 2011, Applied and Environmental Microbiology.
[13] Daisuke Sasaki,et al. Detection of active, potentially acetate-oxidizing syntrophs in an anaerobic digester by flux measurement and formyltetrahydrofolate synthetase (FTHFS) expression profiling. , 2011, Microbiology.
[14] R. Margesin,et al. Diversity and ecology of psychrophilic microorganisms. , 2011, Research in microbiology.
[15] R. Conrad,et al. Chemolithotrophic acetogenic H2/CO2 utilization in Italian rice field soil , 2011, The ISME Journal.
[16] Nanette R. Boyle,et al. Computation of metabolic fluxes and efficiencies for biological carbon dioxide fixation. , 2011, Metabolic engineering.
[17] J. G. Kuenen,et al. The Microbial Sulfur Cycle at Extremely Haloalkaline Conditions of Soda Lakes , 2011, Front. Microbio..
[18] S. Haruta,et al. Distinctive Responses of Metabolically Active Microbiota to Acidification in a Thermophilic Anaerobic Digester , 2011, Microbial Ecology.
[19] I. Berg. Ecological Aspects of the Distribution of Different Autotrophic CO2 Fixation Pathways , 2011, Applied and Environmental Microbiology.
[20] S. Spring,et al. Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288T) , 2010, Standards in genomic sciences.
[21] J. P. Cárdenas,et al. Lessons from the genomes of extremely acidophilic bacteria and archaea with special emphasis on bioleaching microorganisms , 2010, Applied Microbiology and Biotechnology.
[22] C. Sasikala,et al. Description of Ectothiorhodospira salini sp. nov. , 2010, The Journal of general and applied microbiology.
[23] K. Tang,et al. Both Forward and Reverse TCA Cycles Operate in Green Sulfur Bacteria* , 2010, The Journal of Biological Chemistry.
[24] David Bastviken,et al. Temperature-controlled organic carbon mineralization in lake sediments , 2010, Nature.
[25] G. Muyzer,et al. Ribulose-1,5-bisphosphate carboxylase/oxygenase genes as a functional marker for chemolithoautotrophic halophilic sulfur-oxidizing bacteria in hypersaline habitats. , 2010, Microbiology.
[26] G. Fuchs,et al. Autotrophic carbon fixation in archaea , 2010, Nature Reviews Microbiology.
[27] R. Milo,et al. Design and analysis of synthetic carbon fixation pathways , 2010, Proceedings of the National Academy of Sciences.
[28] B. Ollivier,et al. Desulfosporosinus acidiphilus sp. nov.: a moderately acidophilic sulfate-reducing bacterium isolated from acid mining drainage sediments , 2010, Extremophiles.
[29] J. Dolfing,et al. Anomalous energy yields in thermodynamic calculations: importance of accounting for pH-dependent organic acid speciation , 2010, The ISME Journal.
[30] R. Conrad,et al. Stable carbon isotope fractionation by acetotrophic sulfur-reducing bacteria. , 2010, FEMS microbiology ecology.
[31] R. Rabus,et al. Substrate-Dependent Regulation of Carbon Catabolism in Marine Sulfate-Reducing Desulfobacterium autotrophicum HRM2 , 2010, Journal of Molecular Microbiology and Biotechnology.
[32] R. Gunsalus,et al. Syntrophy in anaerobic global carbon cycles. , 2009, Current opinion in biotechnology.
[33] G. Muyzer,et al. Propionate and butyrate dependent bacterial sulfate reduction at extremely haloalkaline conditions and description of Desulfobotulus alkaliphilus sp. nov. , 2009, Extremophiles.
[34] H. Drake,et al. Intermediary ecosystem metabolism as a main driver of methanogenesis in acidic wetland soil. , 2009, Environmental microbiology reports.
[35] Alfons J. M. Stams,et al. Electron transfer in syntrophic communities of anaerobic bacteria and archaea , 2009, Nature Reviews Microbiology.
[36] Christine L. Sun,et al. Community Genomic and Proteomic Analyses of Chemoautotrophic Iron-Oxidizing “Leptospirillum rubarum” (Group II) and “Leptospirillum ferrodiazotrophum” (Group III) Bacteria in Acid Mine Drainage Biofilms , 2009, Applied and Environmental Microbiology.
[37] J. P. Cárdenas,et al. Comparative Genomics Begins to Unravel the Ecophysiology of Bioleaching , 2009 .
[38] C. Blank. Phylogenomic dating--a method of constraining the age of microbial taxa that lack a conventional fossil record. , 2009, Astrobiology.
[39] C. Blank. Phylogenomic dating--the relative antiquity of archaeal metabolic and physiological traits. , 2009, Astrobiology.
[40] Hanqing Yu,et al. Effects of temperature and substrate concentration on biological hydrogen production from starch , 2009 .
[41] E. Casamayor,et al. Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark. , 2008, Environmental microbiology.
[42] K. Takai,et al. Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance. , 2008, FEMS microbiology ecology.
[43] Laura J. Crossey,et al. Molecular Characterization of the Diversity and Distribution of a Thermal Spring Microbial Community by Using rRNA and Metabolic Genes , 2008, Applied and Environmental Microbiology.
[44] W. Eisenreich,et al. A dicarboxylate/4-hydroxybutyrate autotrophic carbon assimilation cycle in the hyperthermophilic Archaeum Ignicoccus hospitalis , 2008, Proceedings of the National Academy of Sciences.
[45] M. Koschorreck. Microbial sulphate reduction at a low pH. , 2008, FEMS microbiology ecology.
[46] A. Oren. Microbial life at high salt concentrations: phylogenetic and metabolic diversity , 2008, Saline systems.
[47] H. Drake,et al. Old Acetogens, New Light , 2008, Annals of the New York Academy of Sciences.
[48] Lars Rohlin,et al. Physiology, Ecology, Phylogeny, and Genomics of Microorganisms Capable of Syntrophic Metabolism , 2008, Annals of the New York Academy of Sciences.
[49] W. Whitman,et al. Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea , 2008, Annals of the New York Academy of Sciences.
[50] J. Amend,et al. A "follow the energy" approach for astrobiology. , 2007, Astrobiology.
[51] G. Fuchs,et al. A 3-Hydroxypropionate/4-Hydroxybutyrate Autotrophic Carbon Dioxide Assimilation Pathway in Archaea , 2007, Science.
[52] Á. Aguilera,et al. Prokaryotic community composition and ecology of floating macroscopic filaments from an extreme acidic environment, Río Tinto (SW, Spain). , 2007, Systematic and applied microbiology.
[53] Pierre Regnier,et al. Modeling Microbially Induced Carbon Degradation in Redox-Stratified Subsurface Environments: Concepts and Open Questions , 2007 .
[54] Harald Huber,et al. Ignicoccus hospitalis sp. nov., the host of 'Nanoarchaeum equitans'. , 2007, International journal of systematic and evolutionary microbiology.
[55] David L. Valentine,et al. Opinion: Adaptations to energy stress dictate the ecology and evolution of the Archaea , 2007, Nature Reviews Microbiology.
[56] P. Frenzel,et al. Methanogenesis and methanogenic pathways in a peat from subarctic permafrost. , 2007, Environmental microbiology.
[57] K. Timmis,et al. Shift from Acetoclastic to H2-Dependent Methanogenesis in a West Siberian Peat Bog at Low pH Values and Isolation of an Acidophilic Methanobacterium Strain , 2007, Applied and Environmental Microbiology.
[58] E. Pikuta,et al. Microbial Extremophiles at the Limits of Life , 2007, Critical reviews in microbiology.
[59] D. Canfield,et al. Early anaerobic metabolisms , 2006, Philosophical Transactions of the Royal Society B: Biological Sciences.
[60] B. Jørgensen,et al. Desulfuromonas svalbardensis sp. nov. and Desulfuromusa ferrireducens sp. nov., psychrophilic, Fe(III)-reducing bacteria isolated from Arctic sediments, Svalbard. , 2006, International journal of systematic and evolutionary microbiology.
[61] K. Timmis,et al. The 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum. , 2006, Environmental microbiology.
[62] M. Fields,et al. Microbial Diversity in Sediments of Saline Qinghai Lake, China: Linking Geochemical Controls to Microbial Ecology , 2006, Microbial Ecology.
[63] Kelly P. Nevin,et al. Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing subsurface isolates. , 2005, International journal of systematic and evolutionary microbiology.
[64] O. Kotsyurbenko,et al. Trophic interactions in the methanogenic microbial community of low-temperature terrestrial ecosystems. , 2005, FEMS microbiology ecology.
[65] J. G. Kuenen,et al. Chemolithotrophic haloalkaliphiles from soda lakes. , 2005, FEMS microbiology ecology.
[66] J. Amend,et al. A thermodynamic assessment of energy requirements for biomass synthesis by chemolithoautotrophic micro‐organisms in oxic and anoxic environments , 2005 .
[67] Larry L. Barton,et al. Structural and Functional Relationships in Prokaryotes , 2004 .
[68] W. Grant. Life at low water activity. , 2004, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[69] M. A. Pusheva,et al. Comparative Study of the Energy Metabolism of Anaerobic Alkaliphiles from Soda Lakes , 2004, Microbiology.
[70] B. Campbell,et al. Evidence of Chemolithoautotrophy in the Bacterial Community Associated with Alvinella pompejana, a Hydrothermal Vent Polychaete , 2003, Applied and Environmental Microbiology.
[71] Haruyuki Atomi,et al. Microbial enzymes involved in carbon dioxide fixation. , 2002, Journal of bioscience and bioengineering.
[72] M. McInerney,et al. Anaerobic microbial metabolism can proceed close to thermodynamic limits , 2002, Nature.
[73] B. Patel,et al. Taxonomic, phylogenetic, and ecological diversity of methanogenic Archaea. , 2000, Anaerobe.
[74] P. Mccarty,et al. Environmental Biotechnology: Principles and Applications , 2000 .
[75] B. Jørgensen,et al. Community Size and Metabolic Rates of Psychrophilic Sulfate-Reducing Bacteria in Arctic Marine Sediments , 1999, Applied and Environmental Microbiology.
[76] Aharon Oren,et al. Bioenergetic Aspects of Halophilism , 1999, Microbiology and Molecular Biology Reviews.
[77] B. Patel,et al. Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well. , 1998, International journal of systematic bacteriology.
[78] A. Macario,et al. Methanobacterium subterraneum sp. nov., a new alkaliphilic, eurythermic and halotolerant methanogen isolated from deep granitic groundwater. , 1998, International journal of systematic bacteriology.
[79] H. Aldrich,et al. Methanogenium frigidum sp. nov., a psychrophilic, H2-using methanogen from Ace Lake, Antarctica. , 1997, International journal of systematic bacteriology.
[80] K. Brandt,et al. Desulfobacter halotolerans sp. nov., a Halotolerant Acetate-Oxidizing Sulfate-Reducing Bacterium Isolated from Sediments of Great Salt Lake, Utah , 1997 .
[81] B. Schink. Energetics of syntrophic cooperation in methanogenic degradation , 1997, Microbiology and molecular biology reviews : MMBR.
[82] F. Rainey,et al. Natroniella acetigena gen. nov. sp. nov., an Extremely Haloalkaliphilic, Homoacetic Bacterium: A New Member of Haloanaerobiales , 1996, Current Microbiology.
[83] J. Imhoff,et al. The phylogenetic relationship among Ectothiorhodospiraceae: a reevaluation of their taxonomy on the basis of 16S rDNA analyses , 1996, Archives of Microbiology.
[84] Alfons J. M. Stams,et al. Sulfate reduction in methanogenic bioreactors , 1994 .
[85] J. García,et al. Anaerobic bacteria from hypersaline environments. , 1994, Microbiological reviews.
[86] J. Zeikus,et al. Biology, ecology, and biotechnological applications of anaerobic bacteria adapted to environmental stresses in temperature, pH, salinity, or substrates. , 1993, Microbiological reviews.
[87] K. Stetter,et al. Stygiolobus azoricus gen. nov., sp. nov. Represents a Novel Genus of Anaerobic, Extremely Thermoacid , 1991 .
[88] R. Conrad,et al. Influence of temperature on energetics of hydrogen metabolism in homoacetogenic, methanogenic, and other anaerobic bacteria , 1990, Archives of Microbiology.
[89] Jean-Louis Garcia. Taxonomy and ecology of methanogens , 1990 .
[90] R. Thauer. Citric-acid cycle, 50 years on , 1988 .
[91] J. Imhoff. Reassignment of the Genus Ectothiorhodospira Pelsh 1936 to a New Family, Ectothiorhodospiraceae fam. nov., and Emended Description of the Chromatiaceae Bavendamm 1924 , 1984 .
[92] R. Thauer,et al. Energy conservation in chemotrophic anaerobic bacteria , 1977, Bacteriological reviews.
[93] R. Thauer,et al. Energy Conservation in Chemotrophic Anaerobic Bacteria , 1977, Bacteriological reviews.
[94] A. Larimore,et al. Energy conservation. , 1972, Science.
[95] G. Muyzer,et al. Diversity of RuBisCO and ATP citrate lyase genes in soda lake sediments. , 2011, FEMS microbiology ecology.
[96] S. Sievert,et al. Beyond the Calvin cycle: autotrophic carbon fixation in the ocean. , 2011, Annual review of marine science.
[97] C. Blodau,et al. Energetic constraints on H2-dependent terminal electron accepting processes in anoxic environments: a review of observations and model approaches. , 2010, Environmental science & technology.
[98] E. L H E I M A N N,et al. Energetic Constraints on H 2-Dependent Terminal Electron Accepting Processes in Anoxic Environments : A Review of Observations and Model Approaches , 2009 .
[99] K. Finster. Anaerobic Bacteria and Archaea in Cold Ecosystems , 2008 .
[100] S. Hattori. Syntrophic acetate-oxidizing microbes in methanogenic environments. , 2008, Microbes and environments.
[101] C. Vetriani,et al. Autotrophic CO2 fixation via the reductive tricarboxylic acid cycle in different lineages within the phylum Aquificae: evidence for two ways of citrate cleavage. , 2007, Environmental microbiology.
[102] N. Glansdorff,et al. Physiology and biochemistry of extremophiles. , 2007 .
[103] J. Raymond. The Evolution of Biological Carbon and Nitrogen Cycling—a Genomic Perspective , 2005 .
[104] D. Canfield,et al. Aquatic geomicrobiology. , 2005, Advances in marine biology.
[105] D. Canfield,et al. Systematics and Phylogeny , 2005 .
[106] M. Madigan. Anoxygenic phototrophic bacteria from extreme environments , 2004, Photosynthesis Research.
[107] J. Seckbach. Symbiosis: mechanisms and model systems. , 2002 .
[108] David L. Valentine,et al. Thermodynamic Ecology of Hydrogen-Based Syntrophy , 2001 .
[109] B. Patel,et al. Anaerobes from Extreme Environments , 2000 .
[110] J. Seckbach. Journey to Diverse Microbial Worlds , 2000, Cellular Origin and Life in Extreme Habitats.
[111] I. Ansara,et al. Thermodynamic Assessment of the , 1995 .
[112] R. Thauer. Citric-acid cycle, 50 years on. Modifications and an alternative pathway in anaerobic bacteria. , 1988, European journal of biochemistry.
[113] S. Suzuki. [Anaerobic bacteria]. , 1972, Nihon Ishikai zasshi. Journal of the Japan Medical Association.