Inhibition studies of DNA methyltransferases by maleimide derivatives of RG108 as non-nucleoside inhibitors.
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Johan Wouters | Laurence Fleury | Grégoire Rondelet | J. Wouters | G. Rondelet | L. Willems | J. Dubois | P. Arimondo | V. Masson | Luc Willems | Céline Faux | L. Fleury | Paola B Arimondo | Véronique Masson | Jean Dubois | C. Faux
[1] Randy J. Read,et al. Phaser crystallographic software , 2007, Journal of applied crystallography.
[2] F. Sautel,et al. Design, Synthesis and Biological Evaluation of 4-Amino-N-(4-aminophenyl)benzamide Analogues of Quinoline-Based SGI-1027 as Inhibitors of DNA Methylation , 2014, ChemMedChem.
[3] J. Wouters,et al. Synthesis and Crystallographic Characterization of a Maleimide Derivative of Tryptamine , 2016 .
[4] P. Arimondo,et al. Design and synthesis of new non nucleoside inhibitors of DNMT3A. , 2015, Bioorganic & medicinal chemistry.
[5] P. Emsley,et al. Features and development of Coot , 2010, Acta crystallographica. Section D, Biological crystallography.
[6] Randy J. Read,et al. Acta Crystallographica Section D Biological , 2003 .
[7] R. Roberts,et al. Hhal methyltransferase flips its target base out of the DNA helix , 1994, Cell.
[8] Hualiang Jiang,et al. Identifying novel selective non-nucleoside DNA methyltransferase 1 inhibitors through docking-based virtual screening. , 2014, Journal of medicinal chemistry.
[9] F. Lyko,et al. Modes of action of the DNA methyltransferase inhibitors azacytidine and decitabine , 2008, International journal of cancer.
[10] Peter A. Jones,et al. Cellular differentiation, cytidine analogs and DNA methylation , 1980, Cell.
[11] Ettore Novellino,et al. Selective Non-nucleoside Inhibitors of Human DNA Methyltransferases Active in Cancer Including in Cancer Stem Cells , 2014, Journal of medicinal chemistry.
[12] D. Hornby,et al. Zebularine: a novel DNA methylation inhibitor that forms a covalent complex with DNA methyltransferases. , 2002, Journal of Molecular Biology.
[13] A. Jeltsch,et al. Synthesis and evaluation of analogues of N-phthaloyl-l-tryptophan (RG108) as inhibitors of DNA methyltransferase 1. , 2014, Journal of medicinal chemistry.
[14] Nir London,et al. Covalent Docking of Large Libraries for the Discovery of Chemical Probes , 2014, Nature chemical biology.
[15] M. Esteller. Epigenetics in cancer. , 2008, The New England journal of medicine.
[16] Peter A. Jones. Functions of DNA methylation: islands, start sites, gene bodies and beyond , 2012, Nature Reviews Genetics.
[17] J. Wouters,et al. Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B. , 2016, Journal of structural biology.
[18] I. Merfort. Perspectives on sesquiterpene lactones in inflammation and cancer. , 2011, Current drug targets.
[19] P. Pelicci,et al. Decitabine, differently from DNMT1 silencing, exerts its antiproliferative activity through p21 upregulation in malignant pleural mesothelioma (MPM) cells. , 2009, Lung cancer.
[20] T. Halgren. Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94 , 1996, J. Comput. Chem..
[21] Ivet Bahar,et al. Coupling between Catalytic Loop Motions and Enzyme Global Dynamics , 2012, PLoS Comput. Biol..
[22] F. Niesen,et al. The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability , 2007, Nature Protocols.
[23] R. Roberts,et al. Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base , 1998, Nature Structural Biology.
[24] T. N. Bhat,et al. The Protein Data Bank , 2000, Nucleic Acids Res..
[25] José L. Medina-Franco,et al. Homology modeling, docking and structure-based pharmacophore of inhibitors of DNA methyltransferase , 2011, J. Comput. Aided Mol. Des..
[26] Frank Lyko,et al. Epigenetic reactivation of tumor suppressor genes by a novel small-molecule inhibitor of human DNA methyltransferases. , 2005, Cancer research.
[27] S. Klimašauskas,et al. Direct observation of cytosine flipping and covalent catalysis in a DNA methyltransferase , 2011, Nucleic acids research.
[28] D. Patel,et al. Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation , 2012, Science.
[29] K. Caron,et al. Synthesis and evaluation of peptidic maleimides as transglutaminase inhibitors. , 2007, Bioorganic & medicinal chemistry letters.
[30] Byron H. Lee,et al. Procainamide Is a Specific Inhibitor of DNA Methyltransferase 1* , 2005, Journal of Biological Chemistry.
[31] S. Yao,et al. Developing new chemical tools for DNA methyltransferase 1 (DNMT 1): a small-molecule activity-based probe and novel tetrazole-containing inhibitors. , 2015, Bioorganic & medicinal chemistry.
[32] T. Bestor,et al. Eukaryotic cytosine methyltransferases. , 2005, Annual review of biochemistry.
[33] Richard J. Roberts,et al. Crystal structure of the Hhal DNA methyltransferase complexed with S-adenosyl-l-methionine , 1993, Cell.
[34] K. Ghoshal,et al. A new class of quinoline-based DNA hypomethylating agents reactivates tumor suppressor genes by blocking DNA methyltransferase 1 activity and inducing its degradation. , 2009, Cancer research.
[35] Thomas Stützle,et al. Empirical Scoring Functions for Advanced Protein-Ligand Docking with PLANTS , 2009, J. Chem. Inf. Model..
[36] J. Medina-Franco,et al. Nanaomycin A Selectively Inhibits DNMT3B and Reactivates Silenced Tumor Suppressor Genes in Human Cancer Cells , 2010, Molecular Cancer Therapeutics.
[37] A. Jeltsch,et al. C5‐DNA Methyltransferase Inhibitors: From Screening to Effects on Zebrafish Embryo Development , 2011, Chembiochem : a European journal of chemical biology.
[38] A. Razin,et al. Cloning, characterization, and expression in Escherichia coli of the gene coding for the CpG DNA methylase from Spiroplasma sp. strain MQ1(M.SssI). , 1990, Nucleic acids research.
[39] Juan Aranda,et al. Unraveling the Reaction Mechanism of Enzymatic C5-Cytosine Methylation of DNA. A Combined Molecular Dynamics and QM/MM Study of Wild Type and Gln119 Variant , 2016 .
[40] R. Roberts,et al. Purification, crystallization, and preliminary X-ray diffraction analysis of an M.HhaI-AdoMet complex. , 1992, Biochemistry.
[41] R. Nunes,et al. Synthesis and biological evaluation of N-antipyrine-4-substituted amino-3-chloromaleimide derivatives. , 2010, European journal of medicinal chemistry.
[42] M. Karplus,et al. CHARMM: A program for macromolecular energy, minimization, and dynamics calculations , 1983 .
[43] Frank Lyko,et al. DNA methyltransferase inhibitors and the development of epigenetic cancer therapies. , 2005, Journal of the National Cancer Institute.
[44] John Calvin Reed,et al. Inhibition of Bfl-1 with N-aryl maleimides. , 2010, Bioorganic & medicinal chemistry letters.
[45] Guido Marcucci,et al. Curcumin is a potent DNA hypomethylation agent. , 2009, Bioorganic & medicinal chemistry letters.
[46] R. Roberts,et al. Structure of a binary complex of HhaI methyltransferase with S-adenosyl-L-methionine formed in the presence of a short non-specific DNA oligonucleotide. , 1999, Journal of molecular biology.
[47] R. Roberts,et al. Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes. , 1996, Journal of molecular biology.
[48] Lucia Altucci,et al. Epi-drugs to fight cancer: from chemistry to cancer treatment, the road ahead. , 2009, The international journal of biochemistry & cell biology.
[49] R. Nunes,et al. Antifungal Properties of Novel N- and α,β-Substituted Succinimides against Dermatophytes , 2003, Arzneimittelforschung.
[50] D. Rao,et al. Structure, Function, and Mechanism of HhaI DNA Methyltransferases , 2002, Critical reviews in biochemistry and molecular biology.
[51] G. Muccioli,et al. Synthesis and in vitro evaluation of N-substituted maleimide derivatives as selective monoglyceride lipase inhibitors. , 2009, Journal of medicinal chemistry.
[52] P. Arimondo,et al. Development of a universal radioactive DNA methyltransferase inhibition test for high-throughput screening and mechanistic studies , 2013, Nucleic acids research.
[53] Guido Marcucci,et al. Modulation of DNA Methylation by a Sesquiterpene Lactone Parthenolide , 2009, Journal of Pharmacology and Experimental Therapeutics.
[54] J. Christman,et al. 5-Azacytidine and 5-aza-2′-deoxycytidine as inhibitors of DNA methylation: mechanistic studies and their implications for cancer therapy , 2002, Oncogene.
[55] R. J. Doerksen,et al. Probing the physicochemical and structural requirements for glycogen synthase kinase-3alpha inhibition: 2D-QSAR for 3-anilino-4-phenylmaleimides. , 2006, Bioorganic & medicinal chemistry.
[56] Kai Zhu,et al. Docking Covalent Inhibitors: A Parameter Free Approach To Pose Prediction and Scoring , 2014, J. Chem. Inf. Model..
[57] T. Bestor,et al. The DNA methyltransferases of mammals. , 2000, Human molecular genetics.
[58] J. Christman,et al. Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine. , 1999, Journal of molecular biology.
[59] Takayoshi Suzuki,et al. Design, synthesis, inhibitory activity, and binding mode study of novel DNA methyltransferase 1 inhibitors. , 2010, Bioorganic & medicinal chemistry letters.
[60] J. Briand,et al. Methyl 2-((succinimidooxy)carbonyl)benzoate (MSB): a new, efficient reagent for N-phthaloylation of amino acid and peptide derivatives. , 2002, The Journal of organic chemistry.
[61] Manfred J. Sippl,et al. NQ-Flipper: validation and correction of asparagine/glutamine amide rotamers in protein crystal structures , 2006, Bioinform..
[62] N. Reguart,et al. Wnt inhibitory factor-1, a Wnt antagonist, is silenced by promoter hypermethylation in malignant pleural mesothelioma. , 2006, Biochemical and biophysical research communications.
[63] Frank Lyko,et al. Discovery of two novel, small-molecule inhibitors of DNA methylation. , 2006, Journal of medicinal chemistry.
[64] Xiaodong Cheng,et al. Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation , 2007, Nature.
[65] J. Issa,et al. Targeting DNA Methylation , 2009, Clinical Cancer Research.
[66] Jean-Marc Gregoire,et al. DNA methylation inhibitors in cancer: recent and future approaches. , 2012, Biochimie.
[67] A. Wutz. Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation , 2011, Nature Reviews Genetics.
[68] P Willett,et al. Development and validation of a genetic algorithm for flexible docking. , 1997, Journal of molecular biology.
[69] P. Arimondo,et al. Targeting DNA methylation with small molecules: what's next? , 2015, Journal of medicinal chemistry.
[70] M. Lübbert,et al. Efficacy of decitabine in the treatment of patients with chronic myelomonocytic leukemia (CMML). , 2006, Leukemia research.
[71] L. Willems,et al. The role of epigenetics in malignant pleural mesothelioma. , 2013, Lung cancer.