Mathematically guided approaches to distinguish models of periodic patterning
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[1] J Raspopovic,et al. Digit patterning is controlled by a Bmp-Sox9-Wnt Turing network modulated by morphogen gradients , 2014, Science.
[2] C. Nüsslein-Volhard,et al. Proliferation, dispersal and patterned aggregation of iridophores in the skin prefigure striped colouration of zebrafish , 2014, Nature Cell Biology.
[3] Shigeru Kondo,et al. In vitro analysis suggests that difference in cell movement during direct interaction can generate various pigment patterns in vivo , 2014, Proceedings of the National Academy of Sciences.
[4] Masakatsu Watanabe,et al. Involvement of Delta/Notch signaling in zebrafish adult pigment stripe patterning , 2014, Development.
[5] Donald E Ingber,et al. Quantifying cell-generated mechanical forces within living embryonic tissues , 2013, Nature Methods.
[6] David L. Kaplan,et al. Villification: How the Gut Gets Its Villi , 2013, Science.
[7] D. Mooney,et al. Cell mediated contraction in 3D cell-matrix constructs leads to spatially regulated osteogenic differentiation. , 2013, Integrative biology : quantitative biosciences from nano to macro.
[8] V. Shastri,et al. Polysaccharide hydrogels with tunable stiffness and provasculogenic properties via α-helix to β-sheet switch in secondary structure , 2013, Proceedings of the National Academy of Sciences.
[9] C. Nüsslein-Volhard,et al. Iridophores and their interactions with other chromatophores are required for stripe formation in zebrafish , 2013, Development.
[10] Kristi S Anseth,et al. Three-dimensional hMSC motility within peptide-functionalized PEG-based hydrogels of varying adhesivity and crosslinking density. , 2013, Acta biomaterialia.
[11] Philipp J. Keller,et al. Towards comprehensive cell lineage reconstructions in complex organisms using light‐sheet microscopy , 2013, Development, growth & differentiation.
[12] L. Schaefer,et al. Unilateral dampening of Bmp activity by nodal generates cardiac left-right asymmetry. , 2013, Developmental cell.
[13] M. Mikkola,et al. Fgf20 governs formation of primary and secondary dermal condensations in developing hair follicles. , 2013, Genes & development.
[14] Le Cong,et al. Multiplex Genome Engineering Using CRISPR/Cas Systems , 2013, Science.
[15] Matthias Zwicker,et al. Crocodile Head Scales Are Not Developmental Units But Emerge from Physical Cracking , 2013, Science.
[16] Dagmar Iber,et al. Digit patterning during limb development as a result of the BMP-receptor interaction , 2012, Scientific Reports.
[17] J. Sharpe,et al. Hox Genes Regulate Digit Patterning by Controlling the Wavelength of a Turing-Type Mechanism , 2012, Science.
[18] James Sharpe,et al. Turing patterns in development: what about the horse part? , 2012, Current opinion in genetics & development.
[19] Kevin J. Painter,et al. Towards an integrated experimental–theoretical approach for assessing the mechanistic basis of hair and feather morphogenesis , 2012, Interface Focus.
[20] Katherine W. Rogers,et al. Differential Diffusivity of Nodal and Lefty Underlies a Reaction-Diffusion Patterning System , 2012, Science.
[21] Masakatsu Watanabe,et al. Changing clothes easily: connexin41.8 regulates skin pattern variation , 2012, Pigment cell & melanoma research.
[22] Luis G. Morelli,et al. Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock , 2012, Development.
[23] Shigeru Kondo,et al. Pigment Pattern Formation by Contact-Dependent Depolarization , 2012, Science.
[24] Dagmar Iber,et al. Branch Mode Selection during Early Lung Development , 2012, PLoS Comput. Biol..
[25] Paul T. Sharpe,et al. Periodic stripe formation by a Turing-mechanism operating at growth zones in the mammalian palate , 2012, Nature Genetics.
[26] T. Hwa,et al. Sequential Establishment of Stripe Patterns in an Expanding Cell Population , 2011, Science.
[27] L. Mahadevan,et al. On the growth and form of the gut , 2011, Nature.
[28] J. Esko,et al. Heparan sulfate proteoglycans. , 2011, Cold Spring Harbor perspectives in biology.
[29] Matthew W. Pennington,et al. A dynamical model of ommatidial crystal formation , 2011, Proceedings of the National Academy of Sciences.
[30] Ryan S. Udan,et al. Live imaging of mouse embryos. , 2011, Cold Spring Harbor protocols.
[31] Brian Derby,et al. Characterizing the elastic properties of tissues. , 2011, Materials today.
[32] Shigeru Kondo,et al. Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation , 2010, Science.
[33] Shigeru Kondo,et al. Blending of animal colour patterns by hybridization , 2010, Nature communications.
[34] M. Miodownik,et al. Dynamic filopodia transmit intermittent Delta-Notch signaling to drive pattern refinement during lateral inhibition. , 2010, Developmental cell.
[35] David A. Rand,et al. Measurement of single-cell dynamics , 2010, Nature.
[36] R. Zeller,et al. Vertebrate limb bud development: moving towards integrative analysis of organogenesis , 2009, Nature Reviews Genetics.
[37] Kristi S Anseth,et al. Effects of PEG hydrogel crosslinking density on protein diffusion and encapsulated islet survival and function. , 2009, Journal of biomedical materials research. Part A.
[38] A. Kicheva,et al. Morphogen gradient formation. , 2009, Cold Spring Harbor perspectives in biology.
[39] Shigeru Kondo,et al. Interactions between zebrafish pigment cells responsible for the generation of Turing patterns , 2009, Proceedings of the National Academy of Sciences.
[40] John A. Rogers,et al. Mechanical Buckling: Mechanics, Metrology, and Stretchable Electronics , 2009 .
[41] J. Demongeot,et al. BMP2 and BMP7 play antagonistic roles in feather induction , 2008, Development.
[42] J. Tobias,et al. Activation of β-catenin signaling programs embryonic epidermis to hair follicle fate , 2008, Development.
[43] J. Elisseeff. Hydrogels: structure starts to gel. , 2008, Nature materials.
[44] K. Anseth,et al. Hydrogel Cell Cultures , 2007, Science.
[45] Shigeru Kondo,et al. Pattern regulation in the stripe of zebrafish suggests an underlying dynamic and autonomous mechanism , 2007, Proceedings of the National Academy of Sciences.
[46] J. Stark,et al. Hairy Math: Insights into Hair-Follicle Spacing and Orientation , 2007, Cell.
[47] A. Metters,et al. Hydrogels in controlled release formulations: network design and mathematical modeling. , 2006, Advanced drug delivery reviews.
[48] Stephen L. Johnson,et al. Pigment Pattern in jaguar/obelix Zebrafish Is Caused by a Kir7.1 Mutation: Implications for the Regulation of Melanosome Movement , 2006, PLoS genetics.
[49] Hiroshi Hamada,et al. Generation of robust left-right asymmetry in the mouse embryo requires a self-enhancement and lateral-inhibition system. , 2006, Developmental cell.
[50] Philip K Maini,et al. Mixed-mode pattern in Doublefoot mutant mouse limb--Turing reaction-diffusion model on a growing domain during limb development. , 2006, Journal of theoretical biology.
[51] Pascal Schneider,et al. Generation of the primary hair follicle pattern. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[52] E. Knobloch,et al. Localized states in the generalized Swift-Hohenberg equation. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[53] C. López. Macroscopic description of particle systems with nonlocal density-dependent diffusivity. , 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.
[54] A. Üren,et al. Wnt-3a-dependent Cell Motility Involves RhoA Activation and Is Specifically Regulated by Dishevelled-2*[boxs] , 2005, Journal of Biological Chemistry.
[55] Philip K. Maini,et al. Speed of pattern appearance in reaction-diffusion models: Implications in the pattern formation of limb bud mesenchyme cells , 2004, Bulletin of mathematical biology.
[56] James A. Glazier,et al. Non-turing stripes and spots: a novel mechanism for biological cell clustering , 2004 .
[57] J. Paulsson. Summing up the noise in gene networks , 2004, Nature.
[58] J. Murray,et al. On the mechanochemical theory of biological pattern formation with application to vasculogenesis. , 2003, Comptes rendus biologies.
[59] Takashi Miura,et al. Depletion of FGF acts as a lateral inhibitory factor in lung branching morphogenesis in vitro , 2002, Mechanisms of Development.
[60] Y. Saijoh,et al. Determination of left–right patterning of the mouse embryo by artificial nodal flow , 2002, Nature.
[61] Stephen L. Johnson,et al. How the zebrafish gets its stripes. , 2001, Developmental biology.
[62] J. Groenewold. Wrinkling of plates coupled with soft elastic media , 2001 .
[63] P. Maini,et al. Turing instabilities in general systems , 2000, Journal of mathematical biology.
[64] H. Meinhardt,et al. Pattern formation by local self-activation and lateral inhibition. , 2000, BioEssays : news and reviews in molecular, cellular and developmental biology.
[65] K. Shiota,et al. TGFβ2 acts as an “Activator” molecule in reaction‐diffusion model and is involved in cell sorting phenomenon in mouse limb micromass culture , 2000, Developmental dynamics : an official publication of the American Association of Anatomists.
[66] Rihito Asai,et al. Zebrafish Leopard gene as a component of the putative reaction-diffusion system , 1999, Mechanisms of Development.
[67] L Wolpert,et al. Local inhibitory action of BMPs and their relationships with activators in feather formation: implications for periodic patterning. , 1998, Developmental biology.
[68] S. Kondo,et al. A reactiondiffusion wave on the skin of the marine angelfish Pomacanthus , 1995, Nature.
[69] James D. Murray,et al. Parameter domains for spots and stripes in mechanical models for biological pattern formation , 1995 .
[70] M. Cross,et al. Pattern formation outside of equilibrium , 1993 .
[71] M. Levine,et al. Regulation of a segmentation stripe by overlapping activators and repressors in the Drosophila embryo. , 1991, Science.
[72] B. Ermentrout. Stripes or spots? Nonlinear effects in bifurcation of reaction—diffusion equations on the square , 1991, Proceedings of the Royal Society of London. Series A: Mathematical and Physical Sciences.
[73] G F Oster,et al. Pattern formation models and developmental constraints. , 1989, The Journal of experimental zoology.
[74] J. Murray. How the Leopard Gets Its Spots. , 1988 .
[75] D. Paulsen,et al. Microtiter micromass cultures of limb-bud mesenchymal cells , 1988, In Vitro Cellular & Developmental Biology.
[76] F. W. Cummings,et al. A pattern-surface interactive model of morphogenesis , 1985 .
[77] B. Nagorcka,et al. The role of a reaction-diffusion system in the initiation of primary hair follicles. , 1985, Journal of theoretical biology.
[78] J. Murray,et al. Parameter space for turing instability in reaction diffusion mechanisms: a comparison of models. , 1982, Journal of theoretical biology.
[79] H L Frisch,et al. Dynamics of skeletal pattern formation in developing chick limb. , 1979, Science.
[80] H. Meinhardt,et al. Applications of a theory of biological pattern formation based on lateral inhibition. , 1974, Journal of cell science.
[81] H. Meinhardt,et al. A theory of biological pattern formation , 1972, Kybernetik.
[82] A. M. Turing,et al. The chemical basis of morphogenesis , 1952, Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences.
[83] E. Buckingham. On Physically Similar Systems; Illustrations of the Use of Dimensional Equations , 1914 .
[84] S. Megason,et al. In toto imaging of embryogenesis with confocal time-lapse microscopy. , 2009, Methods in molecular biology.
[85] Yong-Tao Zhang,et al. Multiscale models for vertebrate limb development. , 2008, Current topics in developmental biology.
[86] Kristi S Anseth,et al. Materials science. Hydrogel cell cultures. , 2007, Science.
[87] Cheryll Tickle,et al. Developmental cell biology: Making digit patterns in the vertebrate limb , 2006, Nature Reviews Molecular Cell Biology.
[88] Arjen Doelman,et al. Homoclinic Stripe Patterns , 2002, SIAM J. Appl. Dyn. Syst..
[89] K. Shiota,et al. Extracellular matrix environment influences chondrogenic pattern formation in limb bud micromass culture: Experimental verification of theoretical models , 2000, The Anatomical record.
[90] P K Maini,et al. Bifurcating spatially heterogeneous solutions in a chemotaxis model for biological pattern generation. , 1991, Bulletin of mathematical biology.
[91] G F Oster,et al. Generation of biological pattern and form. , 1984, IMA journal of mathematics applied in medicine and biology.
[92] G. Oster,et al. Cell traction models for generating pattern and form in morphogenesis , 1984, Journal of mathematical biology.
[93] B. Nagorcka. Evidence for a reaction-diffusion system as a mechanism controlling mammalian hair growth. , 1983, Bio Systems.
[94] E. C. Zeeman,et al. A clock and wavefront model for control of the number of repeated structures during animal morphogenesis. , 1976, Journal of theoretical biology.
[95] Johannes Jaeger,et al. Cellular and Molecular Life Sciences REVIEW The gap gene network , 2022 .