ART: An ontology based tool for the translation of papers into Semantic Web format

To be presented at SIG/ISMB07 ontology workshop: http://bio-ontologies.org.uk/index.php To be published in BMC Bioinformatics. Sponsorship: JISC

[1]  V. Gold Compendium of chemical terminology , 1987 .

[2]  Jean Carletta,et al.  An annotation scheme for discourse-level argumentation in research articles , 1999, EACL.

[3]  M. Ashburner,et al.  Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.

[4]  Simone Teufel,et al.  Meta-discourse markers and problem-structuring in scientific articles , 2002 .

[5]  M. Ashburner,et al.  An ontology for cell types , 2005, Genome Biology.

[6]  Christopher H. Bryant,et al.  Functional genomic hypothesis generation and experimentation by a robot scientist , 2004, Nature.

[7]  R. Durbin,et al.  The Sequence Ontology: a tool for the unification of genome annotations , 2005, Genome Biology.

[8]  Dan Tidhar,et al.  Retrieving Hierarchical Text Structure from Typeset Scientific Articles – a Prerequisite for E-Science Text Mining , 2005 .

[9]  Simone Teufel,et al.  Flexible Interfaces in the Application of Language Technology to an eScience Corpus , 2006 .

[10]  Kei-Hoi Cheung,et al.  Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences , 2006 .

[11]  Ross D King,et al.  An ontology of scientific experiments , 2006, Journal of The Royal Society Interface.

[12]  P. Hiberty,et al.  The physical origin of large covalent-ionic resonance energies in some two-electron bonds. , 2007, Faraday discussions.

[13]  Peter T. Corbett,et al.  Semantic enrichment of journal articles using chemical named entity recognition , 2007, ACL.

[14]  L. Soldatova,et al.  Ontology Engineering for Biological Applications , 2007 .

[15]  Michael Darsow,et al.  ChEBI: a database and ontology for chemical entities of biological interest , 2007, Nucleic Acids Res..