Prediction of partition coefficients and infinite dilution activity coefficients of 1-ethylpropylamine and 3-methyl-1-pentanol using force field methods
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Ling Wang | Yang Liu | Huai Sun | Xiaofeng Li | Yang Liu | Huai Sun | Xiaofeng Li | Ling Wang
[1] Berk Hess,et al. LINCS: A linear constraint solver for molecular simulations , 1997 .
[2] Andrew J. Dallas,et al. Compilation and Correlation of Limiting Activity Coefficients of Nonelectrolytes in Water , 1996 .
[3] Yan-Ping Chen,et al. Correlation and comparison of the infinite dilution activity coefficients in aqueous and organic mixtures from a modified excess Gibbs energy model , 2004 .
[4] W. L. Jorgensen,et al. Development and Testing of the OPLS All-Atom Force Field on Conformational Energetics and Properties of Organic Liquids , 1996 .
[5] Eirik F. da Silva,et al. Use of free energy simulations to predict infinite dilution activity coefficients , 2004 .
[6] M. Parrinello,et al. Polymorphic transitions in single crystals: A new molecular dynamics method , 1981 .
[7] Hoover,et al. Canonical dynamics: Equilibrium phase-space distributions. , 1985, Physical review. A, General physics.
[8] Gerald J. Niemi,et al. Prediction of octanol/water partition coefficient ( K OW ) with algorithmically derived variables , 1992 .
[9] A. Mark,et al. Avoiding singularities and numerical instabilities in free energy calculations based on molecular simulations , 1994 .
[10] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[11] T. Darden,et al. Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems , 1993 .
[12] Michael R. Shirts,et al. Extremely precise free energy calculations of amino acid side chain analogs: Comparison of common molecular mechanics force fields for proteins , 2003 .
[13] Sven P. Jacobsson,et al. Solubility of Organic Compounds in Water/Octanol Systems. A Expanded Ensemble Molecular Dynamics Simulation Study of log P Parameters , 2001 .
[14] J. Slusher. Estimation of infinite dilution activity coefficients in aqueous mixtures via molecular simulation , 1998 .
[15] C. Eckert,et al. Space predictor for infinite dilution activity coefficients , 1993 .
[16] Michael R. Shirts,et al. Solvation free energies of amino acid side chain analogs for common molecular mechanics water models. , 2005, The Journal of chemical physics.
[17] T. Darden,et al. A smooth particle mesh Ewald method , 1995 .
[18] J. Ilja Siepmann,et al. Partitioning of Alkane and Alcohol Solutes between Water and (Dry or Wet) 1-Octanol , 2000 .
[19] Charles A. Eckert,et al. Prediction of limiting activity coefficients by a modified separation of cohesive energy density model and UNIFAC , 1984 .
[20] A. Ghose,et al. Atomic Physicochemical Parameters for Three‐Dimensional Structure‐Directed Quantitative Structure‐Activity Relationships I. Partition Coefficients as a Measure of Hydrophobicity , 1986 .
[21] C. Yaws. Chemical properties handbook , 1999 .
[22] Hideaki Umeyama,et al. The Study of Partition Coefficients. The Prediction of Log P Value Based on Molecular Structure , 1988 .
[23] G. Pierotti,et al. Activity Coefficients and Molecular Structure , 1959 .
[24] P. Kollman,et al. Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models , 1992 .
[25] W. L. Jorgensen,et al. Comparison of simple potential functions for simulating liquid water , 1983 .
[26] Yuki Sakuratani,et al. Comparison of Predictivities of Log P Calculation Models Based on Experimental Data for 134 Simple Organic Compounds , 2007 .
[27] Bin Chen,et al. Microscopic structure and solvation in dry and wet octanol. , 2006, The journal of physical chemistry. B.
[28] A. Leo. CALCULATING LOG POCT FROM STRUCTURES , 1993 .
[29] William L. Jorgensen,et al. OPLS ALL-ATOM MODEL FOR AMINES : RESOLUTION OF THE AMINE HYDRATION PROBLEM , 1999 .
[30] S. Nosé,et al. Constant pressure molecular dynamics for molecular systems , 1983 .
[31] Peter A. Kollman,et al. FREE ENERGY CALCULATIONS : APPLICATIONS TO CHEMICAL AND BIOCHEMICAL PHENOMENA , 1993 .
[32] Gerrit Groenhof,et al. GROMACS: Fast, flexible, and free , 2005, J. Comput. Chem..
[33] S. Nosé. A molecular dynamics method for simulations in the canonical ensemble , 1984 .