PARPs database: A LIMS systems for protein-protein interaction data mining or laboratory information management system
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Arnaud Droit | Guy G. Poirier | Joanna M. Hunter | Michèle Rouleau | Chantal Ethier | Aude Picard-Cloutier | David Bourgais | G. Poirier | C. Ethier | A. Droit | J. Hunter | M. Rouleau | David Bourgais | Aude Picard-Cloutier
[1] Susan Smith,et al. Resolution of Sister Telomere Association Is Required for Progression Through Mitosis , 2004, Science.
[2] G. Maga,et al. Human Proliferating Cell Nuclear Antigen, Poly(ADP-ribose) Polymerase-1, and p21waf1/cip1 , 2003, Journal of Biological Chemistry.
[3] Alexey I Nesvizhskii,et al. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. , 2002, Analytical chemistry.
[4] Katharina Dittmar,et al. In silico characterization of the family of PARP-like poly(ADP-ribosyl)transferases (pARTs) , 2005, BMC Genomics.
[5] Robertson Craig,et al. TANDEM: matching proteins with tandem mass spectra. , 2004, Bioinformatics.
[6] D. N. Perkins,et al. Probability‐based protein identification by searching sequence databases using mass spectrometry data , 1999, Electrophoresis.
[7] Dipanwita Roy Chowdhury,et al. Human protein reference database as a discovery resource for proteomics , 2004, Nucleic Acids Res..
[8] J. Yates,et al. Direct analysis of protein complexes using mass spectrometry , 1999, Nature Biotechnology.
[9] D Fenyö,et al. Identifying the proteome: software tools. , 2000, Current opinion in biotechnology.
[10] Ioannis Xenarios,et al. DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions , 2002, Nucleic Acids Res..
[11] Donald F Hunt. Personal commentary on proteomics. , 2002, Journal of proteome research.
[12] E. Birney,et al. The International Protein Index: An integrated database for proteomics experiments , 2004, Proteomics.
[13] A. Spradling,et al. Regulation of chromatin structure and gene activity by poly(ADP-ribose) polymerases. , 2003, Current topics in developmental biology.
[14] Arnaud Droit,et al. Bioinformatic Standards for Proteomics-Oriented Mass Spectrometry , 2006 .
[15] Rolf Apweiler,et al. Common interchange standards for proteomics data: Public availability of tools and schema. Report on the Proteomic Standards Initiative Workshop, 2nd Annual HUPO Congress, Montreal, Canada, 8–11th October 2003 , 2004, Proteomics.
[16] Ivar Jacobson,et al. The unified modeling language reference manual , 2010 .
[17] Patrick Lambrix,et al. Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX , 2005, Bioinform..
[18] P. Bork,et al. Functional organization of the yeast proteome by systematic analysis of protein complexes , 2002, Nature.
[19] S. Gygi,et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags , 1999, Nature Biotechnology.
[20] William Stafford Noble,et al. Learning to predict protein-protein interactions from protein sequences , 2003, Bioinform..
[21] Tatiana Tatusova,et al. NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins , 2004, Nucleic Acids Res..
[22] Ting Chen,et al. Assessment of the reliability of protein-protein interactions and protein function prediction , 2002, Pacific Symposium on Biocomputing.
[23] Chris F. Taylor,et al. A systematic approach to modeling, capturing, and disseminating proteomics experimental data , 2003, Nature Biotechnology.
[24] Mark Gerstein,et al. SPINE 2: a system for collaborative structural proteomics within a federated database framework. , 2003, Nucleic acids research.
[25] Gary D Bader,et al. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry , 2002, Nature.
[26] G. Poirier,et al. Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions. , 1999, The Biochemical journal.
[27] E. Wolf,et al. A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[28] R. Ozawa,et al. A comprehensive two-hybrid analysis to explore the yeast protein interactome , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[29] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[30] R. Aebersold,et al. A uniform proteomics MS/MS analysis platform utilizing open XML file formats , 2005, Molecular systems biology.
[31] C Bozzi,et al. Measurement of the branching fraction, and bounds on the CP-violating asymmetries, of neutral B decays to D*+/- D-/+. , 2003, Physical review letters.
[32] B Talbot,et al. Structural and functional analysis of poly(ADP ribose) polymerase: an immunological study. , 1988, Biochimica et biophysica acta.
[33] Michèle Rouleau,et al. Poly(ADP-ribosyl)ated chromatin domains: access granted , 2004, Journal of Cell Science.
[34] James R. Knight,et al. A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae , 2000, Nature.
[35] G. de Murcia,et al. The PARP superfamily , 2004, BioEssays : news and reviews in molecular, cellular and developmental biology.
[36] William S. Hancock. The challenges ahead. , 2002 .
[37] T. Tatusova,et al. Entrez Gene: gene-centered information at NCBI , 2006, Nucleic Acids Res..
[38] Ian M. Donaldson,et al. BIND: the Biomolecular Interaction Network Database , 2001, Nucleic Acids Res..
[39] R. Aebersold,et al. A statistical model for identifying proteins by tandem mass spectrometry. , 2003, Analytical chemistry.
[40] Tatiana A. Tatusova,et al. NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins , 2004, Nucleic Acids Res..
[41] P. Uetz,et al. Systematic and large-scale two-hybrid screens. , 2000, Current opinion in microbiology.
[42] Arnaud Droit,et al. Experimental and bioinformatic approaches for interrogating protein-protein interactions to determine protein function. , 2005, Journal of molecular endocrinology.
[43] Jung Eun Shim,et al. An integrated proteome database for two‐dimensional electrophoresis data analysis and laboratory information management system , 2002, Proteomics.
[44] J. Yates,et al. Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database. , 1995, Analytical chemistry.