Characterization and complete genome analysis of the surfactin-producing, plant-protecting bacterium Bacillus velezensis 9D-6

[1]  P. Liu,et al.  Clavibacter michiganensis ssp. michiganensis: bacterial canker of tomato, molecular interactions and disease management. , 2018, Molecular plant pathology.

[2]  A. Sessitsch,et al.  Biocontrol activity of surfactin A purified from Bacillus NH-100 and NH-217 against rice bakanae disease. , 2018, Microbiological research.

[3]  G. Płaza,et al.  Agricultural potential of rhizospheric Bacillus subtilis strains exhibiting varied efficiency of surfactin production , 2017 .

[4]  O. Geiger,et al.  Bacterial lipid diversity. , 2017, Biochimica et biophysica acta. Molecular and cell biology of lipids.

[5]  M. Bernards,et al.  A Hydroponic Co-cultivation System for Simultaneous and Systematic Analysis of Plant/Microbe Molecular Interactions and Signaling. , 2017, Journal of visualized experiments : JoVE.

[6]  Junling Shi,et al.  Biological activity of lipopeptides from Bacillus , 2017, Applied Microbiology and Biotechnology.

[7]  A. C. Murphy,et al.  Structure of the Fundamental Lipopeptide Surfactin at the Air/Water Interface Investigated by Sum Frequency Generation Spectroscopy. , 2017, The journal of physical chemistry. B.

[8]  Changhong Liu,et al.  Genomic and metabolic traits endow Bacillus velezensis CC09 with a potential biocontrol agent in control of wheat powdery mildew disease. , 2017, Microbiological research.

[9]  Li Huiping,et al.  Identification of endophytic Bacillus velezensis ZSY-1 strain and antifungal activity of its volatile compounds against Alternaria solani and Botrytis cinerea , 2017 .

[10]  H. Klenk,et al.  Bacillus amyloliquefaciens, Bacillus velezensis, and Bacillus siamensis Form an “Operational Group B. amyloliquefaciens” within the B. subtilis Species Complex , 2017, Front. Microbiol..

[11]  C. Dunlap,et al.  Bacillus velezensis RC 218 as a biocontrol agent to reduce Fusarium head blight and deoxynivalenol accumulation: Genome sequencing and secondary metabolite cluster profiles. , 2016, Microbiological research.

[12]  J. Mathew,et al.  Identification of endophytic Bacillus mojavensis with highly specialized broad spectrum antibacterial activity , 2016, 3 Biotech.

[13]  J. Milanowski,et al.  Pantoea agglomerans: a mysterious bacterium of evil and good. Part III. Deleterious effects: infections of humans, animals and plants. , 2016, Annals of agricultural and environmental medicine : AAEM.

[14]  P. Straight,et al.  Multifaceted Interfaces of Bacterial Competition , 2016, Journal of bacteriology.

[15]  T. Klein,et al.  Draft Genome Sequences of Three Bacillus Species from South African Marine Sponges , 2016, Genome Announcements.

[16]  C. Dunlap,et al.  Bacillus velezensis is not a later heterotypic synonym of Bacillus amyloliquefaciens; Bacillus methylotrophicus, Bacillus amyloliquefaciens subsp. plantarum and 'Bacillus oryzicola' are later heterotypic synonyms of Bacillus velezensis based on phylogenomics. , 2016, International journal of systematic and evolutionary microbiology.

[17]  G. Sandmann,et al.  Aryl Polyenes, a Highly Abundant Class of Bacterial Natural Products, Are Functionally Related to Antioxidative Carotenoids , 2016, Chembiochem : a European journal of chemical biology.

[18]  Ian W Hamley,et al.  Lipopeptides: from self-assembly to bioactivity. , 2015, Chemical communications.

[19]  Kai Blin,et al.  antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters , 2015, Nucleic Acids Res..

[20]  Y. Liao,et al.  Antagonistic Mechanism of Iturin A and Plipastatin A from Bacillus amyloliquefaciens S76-3 from Wheat Spikes against Fusarium graminearum , 2015, PloS one.

[21]  S. Nair,et al.  Structure and mechanism of lanthipeptide biosynthetic enzymes. , 2014, Current opinion in structural biology.

[22]  Roger G. Linington,et al.  Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters , 2014, Cell.

[23]  H. Koch,et al.  The Sec translocon mediated protein transport in prokaryotes and eukaryotes , 2014, Molecular membrane biology.

[24]  P. Thonart,et al.  Plant defense stimulation by natural isolates of bacillus depends on efficient surfactin production. , 2014, Molecular plant-microbe interactions : MPMI.

[25]  E. Holub,et al.  Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to brassica crops. , 2013, Molecular plant pathology.

[26]  Tracy Palmer,et al.  The twin-arginine translocation (Tat) protein export pathway , 2012, Nature Reviews Microbiology.

[27]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[28]  Maxim Teslenko,et al.  MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space , 2012, Systematic biology.

[29]  Peter Williams,et al.  IMG: the integrated microbial genomes database and comparative analysis system , 2011, Nucleic Acids Res..

[30]  K. Hyde,et al.  Cochliobolus: an overview and current status of species , 2011, Fungal Diversity.

[31]  R. Harakava,et al.  Growth promotion and induction of resistance in tomato plant against Xanthomonas euvesicatoria and Alternaria solani by Trichoderma spp. , 2011 .

[32]  H. Kim,et al.  Lantibiotics, class I bacteriocins from the genus Bacillus. , 2011, Journal of microbiology and biotechnology.

[33]  Ari Löytynoja,et al.  webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser , 2010, BMC Bioinformatics.

[34]  D. B. Kearns,et al.  A field guide to bacterial swarming motility , 2010, Nature Reviews Microbiology.

[35]  A. Munda,et al.  First Report of Brown Rot Caused by Monilinia fructicola Affecting Peach Orchards in Slovenia. , 2010, Plant disease.

[36]  Hans-Peter Klenk,et al.  Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs , 2010, Standards in genomic sciences.

[37]  Ben C. Stöver,et al.  TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses , 2010, BMC Bioinformatics.

[38]  Md. Wasim Aktar,et al.  Impact of pesticides use in agriculture: their benefits and hazards , 2009, Interdisciplinary toxicology.

[39]  Bozhong Mu,et al.  Variants of Lipopeptides Produced by Bacillus licheniformis HSN221 in Different Medium Components Evaluated by a Rapid Method ESI-MS , 2008, International Journal of Peptide Research and Therapeutics.

[40]  N. Kondo,et al.  Identification and pathogenicity of Pythium species causing damping-off of kidney bean , 2008, Journal of General Plant Pathology.

[41]  G. Martin,et al.  A Pseudomonas syringae pv. tomato DC3000 mutant lacking the type III effector HopQ1-1 is able to cause disease in the model plant Nicotiana benthamiana. , 2007, The Plant journal : for cell and molecular biology.

[42]  Michel Schneider,et al.  UniProtKB/Swiss-Prot. , 2007, Methods in molecular biology.

[43]  Yan Boucher,et al.  Use of 16S rRNA and rpoB Genes as Molecular Markers for Microbial Ecology Studies , 2006, Applied and Environmental Microbiology.

[44]  D. Geiser,et al.  Members of the Fusarium solani Species Complex That Cause Infections in Both Humans and Plants Are Common in the Environment , 2006, Journal of Clinical Microbiology.

[45]  J. Nowak,et al.  Use of Plant Growth-Promoting Bacteria for Biocontrol of Plant Diseases: Principles, Mechanisms of Action, and Future Prospects , 2005, Applied and Environmental Microbiology.

[46]  E. Quesada,et al.  Bacillus velezensis sp. nov., a surfactant-producing bacterium isolated from the river Vélez in Málaga, southern Spain. , 2005, International journal of systematic and evolutionary microbiology.

[47]  F. Blattner,et al.  Mauve: multiple alignment of conserved genomic sequence with rearrangements. , 2004, Genome research.

[48]  M. Farag,et al.  Bacterial Volatiles Induce Systemic Resistance in Arabidopsis1 , 2004, Plant Physiology.

[49]  J. Vessey Plant growth promoting rhizobacteria as biofertilizers , 2003, Plant and Soil.

[50]  F. Peypoux,et al.  Controlled biosynthesis of Val7- and Leu7-surfactins , 2004, Applied Microbiology and Biotechnology.

[51]  C. Alabouvette,et al.  Fusarium oxysporum and its biocontrol. , 2003, The New phytologist.

[52]  M. Polissiou,et al.  The effectiveness of plant essential oils on the growth of Botrytis cinerea, Fusarium sp. and Clavibacter michiganensis subsp. michiganensis , 2003 .

[53]  R. Tweddell,et al.  Effect of organic and inorganic salts on the growth and development of Fusarium sambucinum, a causal agent of potato dry rot , 2002 .

[54]  J. Weissenbach,et al.  Genome sequence of the plant pathogen Ralstonia solanacearum , 2002, Nature.

[55]  W. Verstraete,et al.  Probiotic Bacteria as Biological Control Agents in Aquaculture , 2000, Microbiology and Molecular Biology Reviews.

[56]  N. Stuurman,et al.  Simultaneous imaging of Pseudomonas fluorescens WCS365 populations expressing three different autofluorescent proteins in the rhizosphere: new perspectives for studying microbial communities. , 2000, Molecular plant-microbe interactions : MPMI.

[57]  P. E. Granum,et al.  A new cytotoxin from Bacillus cereus that may cause necrotic enteritis , 2000, Molecular microbiology.

[58]  F. O'Gara,et al.  Small, stable shuttle vectors based on the minimal pVS1 replicon for use in gram-negative, plant-associated bacteria. , 2000, Molecular plant-microbe interactions : MPMI.

[59]  J. Vanneste Fire Blight: The Disease and its Causative Agent, Erwinia amylovora , 2000 .

[60]  T G Burland,et al.  DNASTAR's Lasergene sequence analysis software. , 2000, Methods in molecular biology.

[61]  J. Palmer,et al.  Investigating Deep Phylogenetic Relationships among Cyanobacteria and Plastids by Small Subunit rRNA Sequence Analysis 1 , 1999, The Journal of eukaryotic microbiology.

[62]  W. Botha,et al.  Species of Pythium associated with root-rot of vegetables in South Africa. , 1996 .

[63]  J. Vater,et al.  Identification of amino acid substitutions in the lipopeptide surfactin using 2D NMR spectroscopy. , 1991, Biochemical and biophysical research communications.

[64]  P. Merriman,et al.  Integrated control of pink root (Pyrenochaeta terrestris) of onions by dazomet and soil solarization , 1989 .

[65]  J. C. Sutton,et al.  Epidemiology of wheat head blight and maize ear rot caused by Fusarium graminearum , 1982 .

[66]  L. Madden,et al.  FAST, a Forecast System for Alternaria solani on Tomato , 1978 .

[67]  J. Parmeter Rhizoctonia solani, biology and pathology , 1970 .