Intracellular metabolites in the primate brain are primarily localized in long fibers rather than in cell bodies, as shown by diffusion-weighted magnetic resonance spectroscopy

Due to their pure intracellular compartmentation, the translational diffusion of brain metabolites in vivo depends on the intracellular environment, including viscosity, molecular crowding and subcellular structures. However, as the diffusion time is increased, metabolites have enough time to significantly encounter cell boundaries, so that cell size and geometry are expected to strongly determine metabolite diffusion path. In the present work, diffusion-weighted nuclear magnetic resonance spectroscopy was used to investigate brain metabolite diffusion in vivo, at long and ultra-long diffusion times (from ~80 ms to more than 1 s), in a voxel with equal proportions of white and grey matter in macaque monkeys. No dramatic dependence of the ADC on the diffusion time was observed, suggesting that metabolites' apparent diffusion is largely unrestricted over these time-scales. In an attempt to explain this stability and relate it to plausible cell geometries, data were analyzed with two simple geometrical models describing diffusion either in fibers such as axons, dendrites and astrocytic processes, or in closed cell bodies. Results support the idea that DW-MRS is sensitive to cell shape, and that a vast fraction of brain metabolites is diffusing in long fibers rather than being confined in cell bodies.

[1]  Y. Cohen,et al.  In vivo and in vitro bi‐exponential diffusion of N ‐acetyl aspartate (NAA) in rat brain: a potential structural probe? , 1998, NMR in biomedicine.

[2]  Christian Beaulieu,et al.  Considerations for measuring the fractional anisotropy of metabolites with diffusion tensor spectroscopy , 2011, NMR in biomedicine.

[3]  Itamar Ronen,et al.  Functional diffusion‐weighted magnetic resonance spectroscopy of the human primary visual cortex at 7 T , 2013, Magnetic resonance in medicine.

[4]  F. Kirchhoff,et al.  Three‐dimensional confocal morphometry – a new approach for studying dynamic changes in cell morphology in brain slices , 2007, Journal of anatomy.

[5]  J. Frank,et al.  Neurite beading is sufficient to decrease the apparent diffusion coefficient after ischemic stroke , 2010, Proceedings of the National Academy of Sciences.

[6]  M. Guillermier,et al.  H Nuclear Magnetic Resonance Spectroscopy of the Monkey Brain , 2022 .

[7]  R. Dijkhuizen,et al.  Diffusion of metabolites in normal and ischemic rat brain measured by localized 1H MRS , 1996, Magnetic resonance in medicine.

[8]  John C. Gore,et al.  Effects of susceptibility variations on NMR measurements of diffusion , 1991 .

[9]  Ji-Kyung Choi,et al.  Application of MRS to mouse models of neurodegenerative illness , 2007, NMR in biomedicine.

[10]  Shu-Wei Sun,et al.  Diffusion tensor imaging detects and differentiates axon and myelin degeneration in mouse optic nerve after retinal ischemia , 2003, NeuroImage.

[11]  Philippe Hantraye,et al.  Optimized diffusion‐weighted spectroscopy for measuring brain glutamate apparent diffusion coefficient on a whole‐body MR system , 2005, NMR in biomedicine.

[12]  R. Kauppinen,et al.  Quantitative 1H nuclear magnetic resonance diffusion spectroscopy of BT4C rat glioma during thymidine kinase-mediated gene therapy in vivo: identification of apoptotic response. , 1998, Cancer research.

[13]  F W Wehrli,et al.  Determination of Background Gradients with Diffusion MR Imaging , 1994, Journal of magnetic resonance imaging : JMRI.

[14]  D Le Bihan,et al.  Human brain: proton diffusion MR spectroscopy. , 1993, Radiology.

[15]  James P. Freyer,et al.  Pulsed-gradient spin-echo diffusion studies in NMR imaging , 1990 .

[16]  Christian Beaulieu,et al.  Trace apparent diffusion coefficients of metabolites in human brain using diffusion weighted magnetic resonance spectroscopy , 2005, Magnetic resonance in medicine.

[17]  J. Zhang,et al.  The Effect of Age and Cerebral Ischemia on Diffusion-Weighted Proton MR Spectroscopy of the Human Brain , 2012, American Journal of Neuroradiology.

[18]  P. Basser,et al.  Axcaliber: A method for measuring axon diameter distribution from diffusion MRI , 2008, Magnetic resonance in medicine.

[19]  R Gruetter,et al.  Automatic, localized in Vivo adjustment of all first‐and second‐order shim coils , 1993, Magnetic resonance in medicine.

[20]  N Hayashi,et al.  Temporal Changes of the Apparent Diffusion Coefficients of Water and Metabolites in Rats With Hemispheric Infarction: Experimental Study of Transhemispheric Diaschisis in the Contralateral Hemisphere at 7 Tesla , 2000, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[21]  Michal Neeman,et al.  A simple method for obtaining cross‐term‐free images for diffusion anisotropy studies in NMR microimaging , 1991, Magnetic resonance in medicine.

[22]  Dmitri B. Chklovskii,et al.  Wiring Optimization in Cortical Circuits , 2002, Neuron.

[23]  Philippe Hantraye,et al.  A new sequence for single‐shot diffusion‐weighted NMR spectroscopy by the trace of the diffusion tensor , 2012, Magnetic resonance in medicine.

[24]  Per Linse,et al.  The NMR Self-Diffusion Method Applied to Restricted Diffusion. Simulation of Echo Attenuation from Molecules in Spheres and between Planes , 1993 .

[25]  J. E. Tanner,et al.  Restricted Self‐Diffusion of Protons in Colloidal Systems by the Pulsed‐Gradient, Spin‐Echo Method , 1968 .

[26]  Hiromu Nishitani,et al.  Diffusion‐weighted in vivo localized proton MR spectroscopy of human cerebral ischemia and tumor , 2002, NMR in biomedicine.

[27]  Leif Østergaard,et al.  Modeling dendrite density from magnetic resonance diffusion measurements , 2007, NeuroImage.

[28]  Josef Pfeuffer,et al.  Restricted diffusion and exchange of intracellular water: theoretical modelling and diffusion time dependence of 1H NMR measurements on perfused glial cells , 1998, NMR in biomedicine.

[29]  R. Dijkhuizen,et al.  Changes in the Diffusion of Water and Intracellular Metabolites after Excitotoxic Injury and Global Ischemia in Neonatal Rat Brain , 1999, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[30]  C. Beaulieu,et al.  Diffusion tensor spectroscopy (DTS) of human brain , 2006, Magnetic resonance in medicine.

[31]  Itamar Ronen,et al.  Diffusion properties of NAA in human corpus callosum as studied with diffusion tensor spectroscopy , 2007, Magnetic resonance in medicine.

[32]  Philippe Hantraye,et al.  Anomalous Diffusion of Brain Metabolites Evidenced by Diffusion-Weighted Magnetic Resonance Spectroscopy in Vivo , 2012, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.

[33]  Dae-Shik Kim,et al.  Diffusion tensor spectroscopy and imaging of the arcuate fasciculus , 2008, NeuroImage.

[34]  S. Provencher Estimation of metabolite concentrations from localized in vivo proton NMR spectra , 1993, Magnetic resonance in medicine.

[35]  H Bruhn,et al.  Molecular self‐diffusion of intracellular metabolites in rat brain in vivo Investigated by Localized Proton NMR Diffusion Spectroscopy , 1993, Magnetic resonance in medicine.

[36]  Itamar Ronen,et al.  Differences in apparent diffusion coefficients of brain metabolites between grey and white matter in the human brain measured at 7 T , 2012, Magnetic resonance in medicine.

[37]  J. E. Tanner Use of the Stimulated Echo in NMR Diffusion Studies , 1970 .

[38]  Karl Zilles,et al.  Cortical Orofacial Motor Representation in Old World Monkeys, Great Apes, and Humans , 2004, Brain, Behavior and Evolution.

[39]  Per Linse,et al.  The Validity of the Short-Gradient-Pulse Approximation in NMR Studies of Restricted Diffusion. Simulations of Molecules Diffusing between Planes, in Cylinders and Spheres , 1995 .

[40]  Peter B Barker,et al.  Investigating Axonal Damage in Multiple Sclerosis by Diffusion Tensor Spectroscopy , 2012, The Journal of Neuroscience.

[41]  K. Nicolay,et al.  Diffusion NMR spectroscopy , 2001, NMR in biomedicine.

[42]  J. Frahm,et al.  Alteration of intracellular metabolite diffusion in rat brain in vivo during ischemia and reperfusion. , 1995, Stroke.

[43]  Itamar Ronen,et al.  Axonal and glial microstructural information obtained with diffusion-weighted magnetic resonance spectroscopy at 7T , 2013, Front. Integr. Neurosci..

[44]  W Dreher,et al.  Changes in apparent diffusion coefficients of metabolites in rat brain after middle cerebral artery occlusion measured by proton magnetic resonance spectroscopy , 2001, Magnetic resonance in medicine.

[45]  R. Gruetter,et al.  In vivo 1H NMR spectroscopy of rat brain at 1 ms echo time , 1999, Magnetic resonance in medicine.

[46]  D. Yablonskiy,et al.  On the nature of the NAA diffusion attenuated MR signal in the central nervous system , 2004, Magnetic resonance in medicine.

[47]  Janez Stepišnik,et al.  Validity limits of Gaussian approximation in cumulant expansion for diffusion attenuation of spin echo , 1999 .