Comprehensive and quantitative analysis of white and brown adipose tissue by shotgun lipidomics
暂无分享,去创建一个
M. A. Surma | A. Palladini | K. Simons | M. Grzybek | C. Klose | T. Chavakis | Ü. Coskun | V. Alexaki | M. Surma
[1] S. Bornstein,et al. Adipocyte-Specific Hypoxia-Inducible Factor 2α Deficiency Exacerbates Obesity-Induced Brown Adipose Tissue Dysfunction and Metabolic Dysregulation , 2015, Molecular and Cellular Biology.
[2] T. Ziemssen,et al. A self-sustained loop of inflammation-driven inhibition of beige adipogenesis in obesity , 2017, Nature Immunology.
[3] A. Petcherski,et al. Mitochondria Bound to Lipid Droplets Have Unique Bioenergetics, Composition, and Dynamics that Support Lipid Droplet Expansion. , 2018, Cell metabolism.
[4] Michael Schroeder,et al. LipidXplorer: A Software for Consensual Cross-Platform Lipidomics , 2012, PloS one.
[5] S. Mandrup,et al. RNA-Seq and Mass-Spectrometry-Based Lipidomics Reveal Extensive Changes of Glycerolipid Pathways in Brown Adipose Tissue in Response to Cold. , 2015, Cell reports.
[6] G. Thallinger,et al. Lipidomic analysis of lipid droplets from murine hepatocytes reveals distinct signatures for nutritional stress[S] , 2012, Journal of Lipid Research.
[7] Hadley Wickham,et al. ggplot2 - Elegant Graphics for Data Analysis (2nd Edition) , 2017 .
[8] Hadley Wickham,et al. Reshaping Data with the reshape Package , 2007 .
[9] Stefan R Bornstein,et al. A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language , 2011, Genome Biology.
[10] M. Orešič,et al. Comparison of Lipid and Fatty Acid Composition of the Liver, Subcutaneous and Intra‐abdominal Adipose Tissue, and Serum , 2010, Obesity.
[11] B. Mittendorfer. Origins of metabolic complications in obesity: adipose tissue and free fatty acid trafficking , 2011, Current opinion in clinical nutrition and metabolic care.
[12] Christer S. Ejsing,et al. An ER protein functionally couples neutral lipid metabolism on lipid droplets to membrane lipid synthesis in the ER. , 2014, Cell reports.
[13] M. Matsuda,et al. Adipose Tissue Hypoxia in Obesity and Its Impact on Adipocytokine Dysregulation , 2007, Diabetes.
[14] You-Me Kim,et al. TLR9 regulates adipose tissue inflammation and obesity‐related metabolic disorders , 2015, Obesity.
[15] M. A. Surma,et al. An automated shotgun lipidomics platform for high throughput, comprehensive, and quantitative analysis of blood plasma intact lipids , 2015, European journal of lipid science and technology : EJLST.
[16] L. Joosten,et al. Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity , 2018, Cell.
[17] Josef M. Penninger,et al. Exploring the emerging complexity in transcriptional regulation of energy homeostasis , 2015, Nature Reviews Genetics.
[18] P. Kern,et al. Global Gene Expression Profiles of Subcutaneous Adipose and Muscle From Glucose-Tolerant, Insulin-Sensitive, and Insulin-Resistant Individuals Matched for BMI , 2011, Diabetes.
[19] A. Doseff,et al. Lipidomic Adaptations in White and Brown Adipose Tissue in Response to Exercise Demonstrate Molecular Species-Specific Remodeling. , 2017, Cell Reports.
[20] P. M. Campbell,et al. Comparative Lipidomics and Proteomics of Lipid Droplets in the Mesocarp and Seed Tissues of Chinese Tallow (Triadica sebifera) , 2017, Front. Plant Sci..
[21] Trey Ideker,et al. Nonlinear dimension reduction and clustering by Minimum Curvilinearity unfold neuropathic pain and tissue embryological classes , 2010, Bioinform..
[22] N. Ruderman,et al. What distinguishes adipose tissue of severely obese humans who are insulin sensitive and resistant? , 2013, Current opinion in lipidology.
[23] D. Giannella‐Neto,et al. Depot-specific hormonal characteristics of subcutaneous and visceral adipose tissue and their relation to the metabolic syndrome. , 2002, Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme.
[24] Dorothy D. Sears,et al. Inverse Regulation of Inflammation and Mitochondrial Function in Adipose Tissue Defines Extreme Insulin Sensitivity in Morbidly Obese Patients , 2013, Diabetes.
[25] Spencer J. Williams,et al. Lipidomic Profiling of Adipose Tissue Reveals an Inflammatory Signature in Cancer-Related and Primary Lymphedema , 2016, PloS one.
[26] P. Calder,et al. Lipidomics Profiling of Human Adipose Tissue Identifies a Pattern of Lipids Associated with Fish Oil Supplementation. , 2017, Journal of proteome research.
[27] Martin Trötzmüller,et al. Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models , 2014, Scientific Data.
[28] A. Saltiel,et al. Adapting to obesity with adipose tissue inflammation , 2017, Nature Reviews Endocrinology.
[29] L. Boon,et al. Dual role of B7 costimulation in obesity‐related nonalcoholic steatohepatitis and metabolic dysregulation , 2014, Hepatology.
[30] Cedric E. Ginestet. ggplot2: Elegant Graphics for Data Analysis , 2011 .
[31] Laxman Yetukuri,et al. Association of Lipidome Remodeling in the Adipocyte Membrane with Acquired Obesity in Humans , 2011, PLoS biology.
[32] A. Vidal-Puig,et al. Thematic review series: Adipocyte Biology. Adipose tissue function and plasticity orchestrate nutritional adaptation Published, JLR Papers in Press, March 20, 2007. , 2007, Journal of Lipid Research.
[33] J. B. Kim,et al. Adipose Tissue Remodeling: Its Role in Energy Metabolism and Metabolic Disorders , 2016, Front. Endocrinol..
[34] M. Yamada,et al. Morphological studies on brown adipose tissue in the bat and in humans of various ages. , 1991, Archives of histology and cytology.
[35] R. Sladek,et al. Characterizing the profile of obese patients who are metabolically healthy , 2011, International Journal of Obesity.
[36] Suzanne Eaton,et al. Effects of diet and development on the Drosophila lipidome , 2012, Molecular systems biology.
[37] Hieu Hoang,et al. Comparative Lipidomics of Caenorhabditis elegans Metabolic Disease Models by SWATH Non-Targeted Tandem Mass Spectrometry , 2015, Metabolites.
[38] R. Baker,et al. Analysis of adipose tissue lipid using mass spectrometry. , 2014, Methods in enzymology.
[39] A. Engin. Adipose Tissue Hypoxia in Obesity and Its Impact on Preadipocytes and Macrophages: Hypoxia Hypothesis. , 2017, Advances in experimental medicine and biology.
[40] Zisheng Luo,et al. Effects of Stigmasterol and β-Sitosterol on Nonalcoholic Fatty Liver Disease in a Mouse Model: A Lipidomic Analysis. , 2018, Journal of agricultural and food chemistry.
[41] Christer S. Ejsing,et al. Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry , 2009, Proceedings of the National Academy of Sciences.
[42] T. Chavakis,et al. Innate immune cells in the adipose tissue , 2018, Reviews in Endocrine and Metabolic Disorders.
[43] Kai Simons,et al. Membrane lipidome of an epithelial cell line , 2011, Proceedings of the National Academy of Sciences.
[44] T. Kelder,et al. A Combined Transcriptomics and Lipidomics Analysis of Subcutaneous, Epididymal and Mesenteric Adipose Tissue Reveals Marked Functional Differences , 2010, PloS one.
[45] Clark R. Andersen,et al. Brown Adipose Tissue Improves Whole-Body Glucose Homeostasis and Insulin Sensitivity in Humans , 2014, Diabetes.
[46] R. Irizarry. ggplot2 , 2019, Introduction to Data Science.
[47] L. Sidossis,et al. Browning of subcutaneous white adipose tissue in humans after severe adrenergic stress (1160.5) , 2014, Cell metabolism.
[48] Brian J. Smith,et al. boa: An R Package for MCMC Output Convergence Assessment and Posterior Inference , 2007 .
[49] Michelle M Wiest,et al. A lipidomic analysis of nonalcoholic fatty liver disease , 2007, Hepatology.
[50] E. A. Sims,et al. Are there persons who are obese, but metabolically healthy? , 2001, Metabolism: clinical and experimental.
[51] Nevan J. Krogan,et al. A lipid E-MAP identifies Ubx2 as a critical regulator of lipid saturation and lipid bilayer stress. , 2013, Molecular cell.
[52] M. A. Surma,et al. Identification of Shared and Unique Serum Lipid Profiles in Diabetes Mellitus and Myocardial Infarction , 2016, Journal of the American Heart Association.
[53] K. Simons,et al. Lipidomic approach for stratification of acute myeloid leukemia patients , 2016, PloS one.
[54] D. Chisholm,et al. Insulin-sensitive obesity in humans – a ‘favorable fat’ phenotype? , 2012, Trends in Endocrinology & Metabolism.
[55] Gerd Schmitz,et al. High throughput quantification of cholesterol and cholesteryl ester by electrospray ionization tandem mass spectrometry (ESI-MS/MS). , 2006, Biochimica et biophysica acta.