Biologically informed stratification of periodontal disease holds the key to achieving precision oral health.

Medicine and dentistry need to treat the individual not the "average patient." This personalized or precision approach to health care involves correctly diagnosing and properly classifying people to effectively customize prevention, diagnosis, and treatment. This is not a trivial undertaking. Achieving precision health requires making sense of big data, both at the population level and at the molecular level. The latter can include genetic, epigenetic, transcriptomic, proteomic, metabolomic data, and microbiome data. This biological information can augment established clinical measurements and supplement data on socioeconomic status, lifestyle, behaviors, and environmental conditions. Here, the central thesis is that, with sufficient data and appropriate methods, it is possible to segregate symptom-based and phenotypically based categories of patients into clinically and biologically similar groups. These groups are likely to have different clinical trajectories and benefit from different treatments. Additionally, such groups are optimal for investigations seeking to unveil the genomic basis of periodontal disease susceptibility. Analysis of these complex data to produce actionable and replicable health and disease categories requires appropriately sophisticated bioinformatics approaches and thorough validation in diverse patient samples and populations. Successful research programs will need to consider both population-level and well-controlled deep phenotyping approaches. Biologically informed stratification of periodontal disease is both feasible and desirable. Ultimately, this approach can accelerate the development of precision health through improvements in research and clinical applications. This article is protected by copyright. All rights reserved.

[1]  K. Divaris,et al.  Sources of bias in genomics research of oral and dental traits. , 2020, Community dental health.

[2]  K. Divaris,et al.  Genomics of periodontal disease and tooth morbidity , 2019, Periodontology 2000.

[3]  K. Divaris Searching Deep and Wide: Advances in the Molecular Understanding of Dental Caries and Periodontal Disease , 2019, Advances in dental research.

[4]  K. Divaris The Era of the Genome and Dental Medicine , 2019, Journal of dental research.

[5]  Kelsey E. Grinde,et al.  Genome-wide analysis of dental caries and periodontitis combining clinical and self-reported data , 2019, Nature Communications.

[6]  Jing Yin,et al.  Genetic susceptibility of common polymorphisms in NIN and SIGLEC5 to chronic periodontitis , 2019, Scientific Reports.

[7]  K. North,et al.  GWAS for Interleukin-1β levels in gingival crevicular fluid identifies IL37 variants in periodontal inflammation , 2018, Nature Communications.

[8]  A. Schaefer Genetics of periodontitis: Discovery, biology, and clinical impact , 2018, Periodontology 2000.

[9]  P. Papapanou,et al.  A new classification scheme for periodontal and peri‐implant diseases and conditions – Introduction and key changes from the 1999 classification , 2018, Journal of periodontology.

[10]  J. Beck,et al.  In search of appropriate measures of periodontal status: The Periodontal Profile Phenotype (P3) system , 2018, Journal of periodontology.

[11]  J. Preisser,et al.  Periodontal profile classes predict periodontal disease progression and tooth loss , 2018, Journal of periodontology.

[12]  J. Beck,et al.  Periodontal profile class is associated with prevalent diabetes, coronary heart disease, stroke, and systemic markers of C‐reactive protein and interleukin‐6 , 2018, Journal of periodontology.

[13]  K. Divaris Fundamentals of Precision Medicine. , 2017, Compendium of continuing education in dentistry.

[14]  Y. Tu,et al.  Host genetics role in the pathogenesis of periodontal disease and caries , 2017, Journal of clinical periodontology.

[15]  J. Preisser,et al.  Derivation and Validation of the Periodontal and Tooth Profile Classification System for Patient Stratification , 2017, Journal of periodontology.

[16]  K. North,et al.  Genome-wide association study of biologically informed periodontal complex traits offers novel insights into the genetic basis of periodontal disease , 2016, Human molecular genetics.

[17]  T. Insel,et al.  Brain disorders? Precisely , 2015, Science.

[18]  C. Lewis,et al.  Homogeneous case subgroups increase power in genetic association studies , 2014, European Journal of Human Genetics.

[19]  A. R. Vieira,et al.  Role of genetic factors in the pathogenesis of aggressive periodontitis. , 2014, Periodontology 2000.

[20]  K. Kornman,et al.  Clinical application of genetics to guide prevention and treatment of oral diseases , 2014, Clinical genetics.

[21]  A. Olshan,et al.  Exploring the genetic basis of chronic periodontitis: a genome-wide association study , 2013, Human molecular genetics.

[22]  A. Olshan,et al.  Genome-wide Association Study of Periodontal Pathogen Colonization , 2012, Journal of dental research.

[23]  Thomas Manke,et al.  A genome-wide association study identifies GLT6D1 as a susceptibility locus for periodontitis. , 2010, Human molecular genetics.

[24]  F. Crick,et al.  Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid , 1953, Nature.

[25]  J BERKSON,et al.  Limitations of the application of fourfold table analysis to hospital data. , 1946, Biometrics.

[26]  J. Beck,et al.  Biologically Defined or Biologically Informed Traits Are More Heritable Than Clinically Defined Ones: The Case of Oral and Dental Phenotypes. , 2019, Advances in experimental medicine and biology.

[27]  A genome-wide association study identifies nucleotide variants at SIGLEC5 and DEFA1A3 as risk loci for periodontitis , 2022 .