SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods
暂无分享,去创建一个
Wei Zhang | Jie Ma | Cheng Chang | Jiyang Zhang | Yunping Zhu | Hongwei Xie | Fuchu He | Kehui Liu | Mingfei Han | Songfeng Wu | Wei Zhang | Cheng Chang | Yun-ping Zhu | F. He | Hongwei Xie | Songfeng Wu | Jiyang Zhang | Jie Ma | Mingfei Han | Kehui Liu
[1] M. Mann,et al. Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics* , 2002, Molecular & Cellular Proteomics.
[2] Tao Xu,et al. Toward objective evaluation of proteomic algorithms , 2012, Nature Methods.
[3] Alexey I Nesvizhskii,et al. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. , 2002, Analytical chemistry.
[4] Liwei Li,et al. PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics , 2012, Proteomics.
[5] John R Yates,et al. Mass spectrometry in high-throughput proteomics: ready for the big time , 2010, Nature Methods.
[6] Sung Kyu Park,et al. A quantitative analysis software tool for mass spectrometry–based proteomics , 2008, Nature Methods.
[7] Hongwei Xie,et al. Evaluation of empirical rule of linearly correlated peptide selection (ERLPS) for proteotypic peptide‐based quantitative proteomics , 2014, Proteomics.
[8] Guanghui Wang,et al. Label-free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes. , 2006, Journal of proteome research.
[9] M. Mann,et al. Andromeda: a peptide search engine integrated into the MaxQuant environment. , 2011, Journal of proteome research.
[10] M. Mann,et al. MSQuant, an open source platform for mass spectrometry-based quantitative proteomics. , 2010, Journal of proteome research.
[11] Stephen J. Callister,et al. Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics. , 2006, Journal of proteome research.
[12] Borjana Arsova,et al. Precision, Proteome Coverage, and Dynamic Range of Arabidopsis Proteome Profiling Using 15N Metabolic Labeling and Label-free Approaches , 2012, Molecular & Cellular Proteomics.
[13] M. Mann,et al. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification , 2008, Nature Biotechnology.
[14] Yunhu Wan,et al. IsoQuant: a software tool for stable isotope labeling by amino acids in cell culture-based mass spectrometry quantitation. , 2012, Analytical chemistry.