Genetic diversity and structure of a recent fish invasion: Tench (Tinca tinca) in eastern North America
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N. Mandrak | A. Ricciardi | K. Jeffries | O. Morissette | T. Bernos | S. Avlijaš | J. Hill | Sunčica Avlijaš
[1] L. Bernatchez,et al. Fish community shifts along a strong fluvial environmental gradient revealed by eDNA metabarcoding , 2021, Environmental DNA.
[2] P. Sirois,et al. Quantifying migratory capacity and dispersal of the invasive Tench (Tinca tinca) in the St. Lawrence River using otolith chemistry , 2021 .
[3] J. Walsh,et al. The Invasion Ecology of Sleeper Populations: Prevalence, Persistence, and Abrupt Shifts , 2021 .
[4] J. Marin,et al. Extending approximate Bayesian computation with supervised machine learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest , 2020, Molecular ecology resources.
[5] Å. Berggren,et al. A clue to invasion success: genetic diversity quickly rebounds after introduction bottlenecks , 2020, Biological Invasions.
[6] Allison K. Shaw,et al. Eco-evolutionary dynamics of range expansion. , 2020, Ecology.
[7] Antonopoulou Efthimia,et al. Genetic structure and divergence of tench Tinca tinca European populations. , 2020, Journal of fish biology.
[8] N. Mandrak,et al. Is Niagara Falls a barrier to gene flow in riverine fishes? A test using genome‐wide SNP data from seven native species , 2020, Molecular ecology.
[9] K. Korolev,et al. Genetic drift in range expansions is very sensitive to density dependence in dispersal and growth. , 2019, Ecology letters.
[10] M. Clavero. Beyond one bone: Interdisciplinarity to assess nativeness of the tench ( Tinca tinca ) in Spain , 2019, Aquatic Conservation: Marine and Freshwater Ecosystems.
[11] Jennifer L. Williams,et al. How Evolution Modifies the Variability of Range Expansion. , 2019, Trends in ecology & evolution.
[12] R. Ferrière,et al. Local adaptation, dispersal evolution, and the spatial eco-evolutionary dynamics of invasion. , 2019, Ecology letters.
[13] Peter A. Scott,et al. Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD) , 2019, PeerJ.
[14] J. Puritz,et al. These aren’t the loci you’e looking for: Principles of effective SNP filtering for molecular ecologists , 2018, Molecular ecology.
[15] L. Bernatchez,et al. Combining population genomics and forward simulations to investigate stocking impacts: A case study of Muskellunge (Esox masquinongy) from the St. Lawrence River basin , 2018, bioRxiv.
[16] M. Kinnison,et al. Genomic signatures of population bottleneck and recovery in Northwest Atlantic pinnipeds , 2018, Ecology and evolution.
[17] Jia Gu,et al. fastp: an ultra-fast all-in-one FASTQ preprocessor , 2018, bioRxiv.
[18] N. Mandrak,et al. Eurasian Tench (Tinca tinca): the next Great Lakes invader , 2018 .
[19] G. Yap,et al. Urban landscape genomics identifies fine-scale gene flow patterns in an avian invasive , 2017, Heredity.
[20] Nicolas C Rochette,et al. Deriving genotypes from RAD-seq short-read data using Stacks , 2017, Nature Protocols.
[21] Josephine R. Paris,et al. Lost in parameter space: a road map for stacks , 2017 .
[22] P. Palsbøll,et al. Inferring past demographic changes from contemporary genetic data: A simulation‐based evaluation of the ABC methods implemented in diyabc , 2017, Molecular ecology resources.
[23] L. Seeb,et al. Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping‐by‐sequencing data from natural populations , 2017, Molecular ecology resources.
[24] Carol A. Stepien,et al. Genetic patterns across an invasion's history: a test of change versus stasis for the Eurasian round goby in North America , 2017, Molecular ecology.
[25] Katrina M. Dlugosch,et al. Invasions and extinctions through the looking glass of evolutionary ecology , 2017, Philosophical Transactions of the Royal Society B: Biological Sciences.
[26] Jason B. Dunham,et al. CDMetaPOP: an individual‐based, eco‐evolutionary model for spatially explicit simulation of landscape demogenetics , 2017 .
[27] A. Estoup,et al. Is There a Genetic Paradox of Biological Invasion , 2016 .
[28] P. David,et al. inbreedR: an R package for the analysis of inbreeding based on genetic markers , 2016 .
[29] D. Fraser,et al. Spatiotemporal relationship between adult census size and genetic population size across a wide population size gradient , 2016, Molecular ecology.
[30] T. Uller,et al. Loss of genetic diversity and increased embryonic mortality in non‐native lizard populations , 2016, Molecular ecology.
[31] Måns Magnusson,et al. MultiQC: summarize analysis results for multiple tools and samples in a single report , 2016, Bioinform..
[32] K. Korolev,et al. Range expansions transition from pulled to pushed waves as growth becomes more cooperative in an experimental microbial population , 2016, Proceedings of the National Academy of Sciences.
[33] Niko Balkenhol,et al. Introduction to Landscape Genetics – Concepts, Methods, Applications , 2015 .
[34] Marleen M. P. Cobben,et al. Spatial sorting and range shifts: consequences for evolutionary potential and genetic signature of a dispersal trait. , 2015, Journal of theoretical biology.
[35] T. Blackburn,et al. The influence of numbers on invasion success , 2015, Molecular ecology.
[36] Samantha R Anderson,et al. The devil is in the details: genetic variation in introduced populations and its contributions to invasion , 2015, Molecular ecology.
[37] S. Cushman. Pushing the envelope in genetic analysis of species invasion , 2015, Molecular ecology.
[38] D. Coltman,et al. The genetic signature of rapid range expansions: How dispersal, growth and invasion speed impact heterozygosity and allele surfing. , 2014, Theoretical population biology.
[39] Laurent Excoffier,et al. Expansion load: recessive mutations and the role of standing genetic variation , 2014, bioRxiv.
[40] S. Cushman,et al. Spatially-explicit estimation of Wright's neighborhood size in continuous populations , 2014, Front. Ecol. Evol..
[41] Micheline Manseau,et al. MEMGENE: Spatial pattern detection in genetic distance data , 2014 .
[42] C. Wolter,et al. Patterns and predictors of fish dispersal in rivers , 2014 .
[43] B. Peter. The effective founder effect in a spatially expanding population , 2014, bioRxiv.
[44] G. Luikart,et al. Effects of Overlapping Generations on Linkage Disequilibrium Estimates of Effective Population Size , 2014, Genetics.
[45] C. Bradshaw,et al. Genetics in conservation management: Revised recommendations for the 50/500 rules, Red List criteria and population viability analyses , 2014 .
[46] G. M. Macbeth,et al. NeEstimator v2: re‐implementation of software for the estimation of contemporary effective population size (Ne) from genetic data , 2014, Molecular ecology resources.
[47] R. Stoks,et al. Rapid range expansion increases genetic differentiation while causing limited reduction in genetic diversity in a damselfly , 2013, Heredity.
[48] M. Kirkpatrick,et al. On the accumulation of deleterious mutations during range expansions. , 2013, Molecular ecology.
[49] Angel Amores,et al. Stacks: an analysis tool set for population genomics , 2013, Molecular ecology.
[50] M. Slatkin,et al. DETECTING RANGE EXPANSIONS FROM GENETIC DATA , 2013, Evolution; international journal of organic evolution.
[51] G. Hewitt,et al. Founder takes all: density-dependent processes structure biodiversity. , 2013, Trends in ecology & evolution.
[52] Jacob van Etten,et al. R package gdistance: distances and routes on geographical grids (version 1.1-4) , 2012 .
[53] Samuel A. Cushman,et al. Linking movement behavior and fine-scale genetic structure to model landscape connectivity for bobcats (Lynx rufus) , 2013, Landscape Ecology.
[54] David Levine,et al. A high-performance computing toolset for relatedness and principal component analysis of SNP data , 2012, Bioinform..
[55] D. Fraser,et al. Effective/census population size ratio estimation: a compendium and appraisal , 2012, Ecology and evolution.
[56] A. Estoup,et al. Anthropogenically induced adaptation to invade (AIAI): contemporary adaptation to human-altered habitats within the native range can promote invasions , 2011, Evolutionary applications.
[57] Thibaut Jombart,et al. adegenet 1.3-1: new tools for the analysis of genome-wide SNP data , 2011, Bioinform..
[58] T. Uller,et al. Founder events predict changes in genetic diversity during human‐mediated range expansions , 2011 .
[59] P. England,et al. Estimating Contemporary Effective Population Size on the Basis of Linkage Disequilibrium in the Face of Migration , 2011, Genetics.
[60] S. Cushman,et al. sGD: software for estimating spatially explicit indices of genetic diversity , 2011, Molecular ecology resources.
[61] Gonçalo R. Abecasis,et al. The variant call format and VCFtools , 2011, Bioinform..
[62] C. Garroway,et al. The genetic signature of rapid range expansion by flying squirrels in response to contemporary climate warming , 2011 .
[63] D. Heath,et al. Dispersal strategies, secondary range expansion and invasion genetics of the nonindigenous round goby, Neogobius melanostomus, in Great Lakes tributaries , 2011, Molecular ecology.
[64] Gregory P. Brown,et al. An evolutionary process that assembles phenotypes through space rather than through time , 2011, Proceedings of the National Academy of Sciences.
[65] P. Kotlík,et al. Human-aided dispersal has altered but not erased the phylogeography of the tench , 2011, Evolutionary applications.
[66] Ö. Gürbüz. AGE AND REPRODUCTION FEATURES OF TENCH (Tinca tinca (L., 1758)) FROM HIRFANLI DAM LAKE, KIRŞEHIR, TURKEY , 2011 .
[67] A. Biere,et al. Population admixture, biological invasions and the balance between local adaptation and inbreeding depression , 2011, Proceedings of the Royal Society B: Biological Sciences.
[68] F. Balloux,et al. Discriminant analysis of principal components: a new method for the analysis of genetically structured populations , 2010, BMC Genetics.
[69] G. Luikart,et al. Quantifying the lag time to detect barriers in landscape genetics , 2010, Molecular ecology.
[70] M. Fortin,et al. Considering spatial and temporal scale in landscape‐genetic studies of gene flow , 2010, Molecular ecology.
[71] D. J. Thompson,et al. Patterns of spatial genetic structure and diversity at the onset of a rapid range expansion: colonisation of the UK by the small red-eyed damselfly Erythromma viridulum , 2010, Biological Invasions.
[72] L. Gasco,et al. PCR-RFLP analysis of mitochondrial DNA in tench Tinca tinca. , 2010, Journal of fish biology.
[73] J. Alho,et al. Title Calculating Multilocus Heterozygosity and Heterozygosity-heterozygosity Correlation , 2010 .
[74] L. Excoffier,et al. Genetic Consequences of Range Expansions , 2009 .
[75] A. Peterson,et al. A Tale of Four “Carp”: Invasion Potential and Ecological Niche Modeling , 2009, PloS one.
[76] Carol A. Stepien,et al. Invasion genetics of the Eurasian round goby in North America: tracing sources and spread patterns , 2008, Molecular ecology.
[77] Katrina M. Dlugosch,et al. Invading populations of an ornamental shrub show rapid life history evolution despite genetic bottlenecks. , 2008, Ecology letters.
[78] O. Bossdorf,et al. Selection of preadapted populations allowed Senecio inaequidens to invade Central Europe , 2008 .
[79] T Jombart,et al. Revealing cryptic spatial patterns in genetic variability by a new multivariate method , 2008, Heredity.
[80] Katrina M. Dlugosch,et al. Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions , 2008, Molecular ecology.
[81] Oskar Hallatschek,et al. Gene surfing in expanding populations. , 2007, Theoretical population biology.
[82] D. Nelson,et al. Genetic drift at expanding frontiers promotes gene segregation , 2007, Proceedings of the National Academy of Sciences.
[83] J. Goudet,et al. A step-by-step tutorial to use HierFstat to analyse populations hierarchically structured at multiple levels. , 2007, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
[84] Sarah C. Goslee,et al. The ecodist Package for Dissimilarity-based Analysis of Ecological Data , 2007 .
[85] J. Darling,et al. Paradox lost: genetic diversity and the success of aquatic invasions. , 2007, Trends in ecology & evolution.
[86] Seraina Klopfstein,et al. The fate of mutations surfing on the wave of a range expansion. , 2006, Molecular biology and evolution.
[87] K. Scribner,et al. Patterns of invasion and colonization of the sea lamprey (Petromyzon marinus) in North America as revealed by microsatellite genotypes , 2005, Molecular ecology.
[88] Carol A. Stepien,et al. Genetic Diversity of Invasive Species in the Great Lakes Versus Their Eurasian Source Populations: Insights for Risk Analysis , 2005, Risk analysis : an official publication of the Society for Risk Analysis.
[89] Carol A. Stepien,et al. Invasion Genetics of Ponto-Caspian Gobies in the Great Lakes: A ‘Cryptic’ Species, Absence of Founder Effects, and Comparative Risk Analysis , 2005, Biological Invasions.
[90] K. Zenger,et al. A rapid population expansion retains genetic diversity within European rabbits in Australia , 2003, Molecular ecology.
[91] F. Allendorf,et al. Introduction: Population Biology, Evolution, and Control of Invasive Species , 2003 .
[92] C. Kolar,et al. Ecological Predictions and Risk Assessment for Alien Fishes in North America , 2002, Science.
[93] Carol A. Stepien,et al. Genetic variability and phylogeographical patterns of a nonindigenous species invasion: a comparison of exotic vs. native zebra and quagga mussel populations , 2002 .
[94] R. Nichols,et al. Spatial patterns of genetic variation generated by different forms of dispersal during range expansion , 1996, Heredity.
[95] M. Nei,et al. BOTTLENECK EFFECTS ON AVERAGE HETEROZYGOSITY AND GENETIC DISTANCE WITH THE STEPWISE MUTATION MODEL , 1977, Evolution; international journal of organic evolution.
[96] M. Nei,et al. THE BOTTLENECK EFFECT AND GENETIC VARIABILITY IN POPULATIONS , 1975, Evolution; international journal of organic evolution.
[97] S. Wright,et al. Isolation by distance under diverse systems of mating. , 1946, Genetics.