Single-molecule mechanical identification and sequencing

[1]  C. Dekker,et al.  Highly parallel magnetic tweezers by targeted DNA tethering. , 2011, Nano letters.

[2]  Zhiping Weng,et al.  Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays. , 2010, Nano letters.

[3]  David J Munroe,et al.  Third-generation sequencing fireworks at Marco Island , 2010, Nature Biotechnology.

[4]  Volker Deckert,et al.  Recent advances in single-molecule sequencing. , 2010, Current opinion in biotechnology.

[5]  Robert B. Hartlage,et al.  This PDF file includes: Materials and Methods , 2009 .

[6]  Henrik H. J. Persson,et al.  DNA nanomechanics allows direct digital detection of complementary DNA and microRNA targets , 2009, Nature.

[7]  Timothy D. Harris,et al.  The challenges of sequencing by synthesis , 2009, Nature Biotechnology.

[8]  Stephen J. Benkovic,et al.  Coupling DNA unwinding activity with primer synthesis in the bacteriophage T4 primosome , 2009, Nature chemical biology.

[9]  Kipom Kim,et al.  A high-resolution magnetic tweezer for single-molecule measurements , 2009, Nucleic acids research.

[10]  Dmitry Pushkarev,et al.  Single-molecule sequencing of an individual human genome , 2009, Nature Biotechnology.

[11]  H. Bayley,et al.  Continuous base identification for single-molecule nanopore DNA sequencing. , 2009, Nature nanotechnology.

[12]  Kalim U. Mir,et al.  Sequencing by Cyclic Ligation and Cleavage (CycLiC) directly on a microarray captured template , 2008, Nucleic acids research.

[13]  Hanlee P. Ji,et al.  Next-generation DNA sequencing , 2008, Nature Biotechnology.

[14]  Ellef Hersoug,et al.  Rapid genome sequencing with short universal tiling probes , 2008, Nature Biotechnology.

[15]  W. Greenleaf,et al.  Single-Molecule, Motion-Based DNA Sequencing Using RNA Polymerase , 2006, Science.

[16]  D. Herschlag,et al.  Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[17]  J. Shendure,et al.  Materials and Methods Som Text Figs. S1 and S2 Tables S1 to S4 References Accurate Multiplex Polony Sequencing of an Evolved Bacterial Genome , 2022 .

[18]  J. Shendure,et al.  Advanced sequencing technologies: methods and goals , 2004, Nature Reviews Genetics.

[19]  S. Quake,et al.  Sequence information can be obtained from single DNA molecules , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[20]  G. Zocchi,et al.  Single-molecule detection of DNA hybridization , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[21]  M. Peliti,et al.  Stretching single stranded DNA, a model polyelectrolyte. , 2002, Physical review letters.

[22]  Charlie Gosse,et al.  Magnetic tweezers: micromanipulation and force measurement at the molecular level. , 2002, Biophysical journal.

[23]  Michelle D. Wang,et al.  Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[24]  R Herwig,et al.  An oligonucleotide fingerprint normalized and expressed sequence tag characterized zebrafish cDNA library. , 2001, Genome research.

[25]  J. O'Brien,et al.  New tools for oligonucleotide fingerprinting. , 2001, BioTechniques.

[26]  Hans Lehrach,et al.  Information theoretical probe selection for hybridisation experiments , 2000, Bioinform..

[27]  U. Bockelmann,et al.  Mechanical separation of the complementary strands of DNA. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[28]  A. Bensimon,et al.  The Elasticity of a Single Supercoiled DNA Molecule , 1996, Science.

[29]  C. Bustamante,et al.  Overstretching B-DNA: The Elastic Response of Individual Double-Stranded and Single-Stranded DNA Molecules , 1996, Science.

[30]  F. Sanger,et al.  DNA sequencing with chain-terminating inhibitors. , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[31]  P. V. von Hippel,et al.  Alteration of the relative stability of dA-dT and dG-dC base pairs in DNA. , 1973, Proceedings of the National Academy of Sciences of the United States of America.

[32]  M. Metzker.  Sequencing technologies — the next generation , 2010, Nature Reviews Genetics.

[33]  S. Turner,et al.  Real-time DNA sequencing from single polymerase molecules. , 2010, Methods in enzymology.