Genomic analysis of Staphylococcus aureus along a pork production chain and in the community, Shandong Province, China.

[1]  Baoli Chen,et al.  Presence and molecular characteristics of oxazolidinone resistance in staphylococci from household animals in rural China , 2018, The Journal of antimicrobial chemotherapy.

[2]  A. Hulth,et al.  Identical genotypes of community‐associated MRSA (ST59) and livestock‐associated MRSA (ST9) in humans and pigs in rural China , 2018, Zoonoses and public health.

[3]  R. Goering,et al.  Whole genome sequencing options for bacterial strain typing and epidemiologic analysis based on single nucleotide polymorphism versus gene-by-gene-based approaches. , 2018, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[4]  Yonghong Xiao,et al.  Study protocol for One Health data collections, analyses and intervention of the Sino-Swedish integrated multisectoral partnership for antibiotic resistance containment (IMPACT) , 2018, BMJ Open.

[5]  W. Zhou,et al.  Multiresistant ST59-SCCmec IV-t437 clone with strong biofilm-forming capacity was identified predominantly in MRSA isolated from Chinese children , 2017, BMC Infectious Diseases.

[6]  A. Pantosti,et al.  Livestock-associated meticillin-resistant Staphylococcus aureus (MRSA) among human MRSA isolates, European Union/European Economic Area countries, 2013 , 2017, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[7]  Jian-Hua Liu,et al.  [Emergence of methicillin-resistant Staphylococcus aureus SCCmec type IV/V epidemic clones in a large teaching hospital in China]. , 2017, Nan fang yi ke da xue xue bao = Journal of Southern Medical University.

[8]  F. Aarestrup,et al.  Emergence of Livestock-Associated Methicillin-Resistant Staphylococcus aureus Bloodstream Infections in Denmark , 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[9]  Yang Wang,et al.  Characterization of pig-associated methicillin-resistant Staphylococcus aureus. , 2017, Veterinary microbiology.

[10]  Peer Bork,et al.  Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees , 2016, Nucleic Acids Res..

[11]  L. Wieler,et al.  Livestock-Associated MRSA: The Impact on Humans , 2015, Antibiotics.

[12]  L. Price,et al.  Meticillin-resistant Staphylococcus aureus CC398 is an increasing cause of disease in people with no livestock contact in Denmark, 1999 to 2011. , 2015, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[13]  X. Ye,et al.  Frequency-risk and duration-risk relations between occupational livestock contact and methicillin-resistant Staphylococcus aureus carriage among workers in Guangdong, China. , 2015, American journal of infection control.

[14]  P. Worning,et al.  Monitoring meticillin resistant Staphylococcus aureus and its spread in Copenhagen, Denmark, 2013, through routine whole genome sequencing. , 2015, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[15]  Yhu-Chering Huang,et al.  Livestock-associated meticillin-resistant Staphylococcus aureus in Asia: an emerging issue? , 2015, International journal of antimicrobial agents.

[16]  Brian D. Ondov,et al.  The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes , 2014, Genome Biology.

[17]  Justin Zobel,et al.  SRST2: Rapid genomic surveillance for public health and hospital microbiology labs , 2014, bioRxiv.

[18]  Y.-C. Huang,et al.  New epidemiology of Staphylococcus aureus infection in Asia. , 2014, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[19]  H. Grundmann,et al.  Staphylococcus aureus ST398 from slaughter pigs in northeast China. , 2014, International journal of medical microbiology : IJMM.

[20]  Ole Lund,et al.  Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli , 2014, Journal of Clinical Microbiology.

[21]  L. Price,et al.  Rapid Differentiation between Livestock-Associated and Livestock-Independent Staphylococcus aureus CC398 Clades , 2013, PloS one.

[22]  S. Rasmussen,et al.  Identification of acquired antimicrobial resistance genes , 2012, The Journal of antimicrobial chemotherapy.

[23]  B. Cao,et al.  Characterization of Community Acquired Staphylococcus aureus Associated with Skin and Soft Tissue Infection in Beijing: High Prevalence of PVL+ ST398 , 2012, PloS one.

[24]  P. Andersen,et al.  Rapid detection, differentiation and typing of methicillin-resistant Staphylococcus aureus harbouring either mecA or the new mecA homologue mecA(LGA251). , 2012, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[25]  Maliha Aziz,et al.  Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock , 2012, mBio.

[26]  A. Hensel,et al.  Factors associated with the occurrence of MRSA CC398 in herds of fattening pigs in Germany , 2011, BMC veterinary research.

[27]  Stefan Schwarz,et al.  A Field Guide to Pandemic, Epidemic and Sporadic Clones of Methicillin-Resistant Staphylococcus aureus , 2011, PloS one.

[28]  J. Wagenaar,et al.  Unexpected sequence types in livestock associated methicillin-resistant Staphylococcus aureus (MRSA): MRSA ST9 and a single locus variant of ST9 in pig farming in China. , 2009, Veterinary microbiology.

[29]  Changqin Hu,et al.  Isolation and characterization of methicillin-resistant Staphylococcus aureus from swine and workers in China. , 2009, The Journal of antimicrobial chemotherapy.

[30]  David M. Aanensen,et al.  The multilocus sequence typing network: mlst.net , 2005, Nucleic Acids Res..

[31]  J. Rothgänger,et al.  Typing of Methicillin-Resistant Staphylococcus aureus in a University Hospital Setting by Using Novel Software for spa Repeat Determination and Database Management , 2003, Journal of Clinical Microbiology.

[32]  Clinical,et al.  Performance standards for antimicrobial susceptibility testing , 2019 .

[33]  J. Lindsay Evolution of Staphylococcus aureus and MRSA during outbreaks. , 2014, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

[34]  P. Wayne PERFORMANCE STANDARDS FOR ANTIMICROBIAL SUSCEPTIBILITY TESTING, NINTH INFORMATIONAL SUPPLEMENT , 2008 .

[35]  中華人民共和国国家統計局 China statistical yearbook , 1988 .