EXPath: a database of comparative expression analysis inferring metabolic pathways for plants
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W. Chang | Chia-Hung Chien | C. Chow | Ping-Fu Hou | Yi-Fan Chiang-Hsieh | Nai-Yun Wu | Wen-Chi Chang
[1] Chia-Hung Chien,et al. EXPath: a database of comparative expression analysis inferring metabolic pathways for plants , 2015, BMC Genomics.
[2] Hsien-Da Huang,et al. Large-Scale Investigation of Human TF-miRNA Relations Based on Coexpression Profiles , 2014, BioMed research international.
[3] Wen-Chi Chang,et al. AlgaePath: comprehensive analysis of metabolic pathways using transcript abundance data from next-generation sequencing in green algae , 2014, BMC Genomics.
[4] Dan M. Bolser,et al. Gramene 2013: comparative plant genomics resources , 2013, Nucleic Acids Res..
[5] Susumu Goto,et al. Data, information, knowledge and principle: back to metabolism in KEGG , 2013, Nucleic Acids Res..
[6] Paolo Fontana,et al. Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data , 2013, Bioinform..
[7] Hoo Sun Chung,et al. Negative Feedback Control of Jasmonate Signaling by an Alternative Splice Variant of JAZ101[C][W][OA] , 2013, Plant Physiology.
[8] Yoshihiro Kawahara,et al. Rice Annotation Project Database (RAP-DB): An Integrative and Interactive Database for Rice Genomics , 2013, Plant & cell physiology.
[9] Sean R. Davis,et al. NCBI GEO: archive for functional genomics data sets—update , 2012, Nucleic Acids Res..
[10] Yoshiaki Nagamura,et al. RiceXPro Version 3.0: expanding the informatics resource for rice transcriptome , 2012, Nucleic Acids Res..
[11] Jie Li,et al. MetNet Online: a novel integrated resource for plant systems biology , 2012, BMC Bioinformatics.
[12] K. Vandepoele,et al. Comparative co-expression analysis in plant biology. , 2012, Plant, cell & environment.
[13] P. Urwin,et al. The interaction of plant biotic and abiotic stresses: from genes to the field. , 2012, Journal of experimental botany.
[14] Tanya Z. Berardini,et al. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools , 2011, Nucleic Acids Res..
[15] Julie A. Dickerson,et al. PLEXdb: gene expression resources for plants and plant pathogens , 2011, Nucleic Acids Res..
[16] Syed Haider,et al. Ensembl BioMarts: a hub for data retrieval across taxonomic space , 2011, Database J. Biol. Databases Curation.
[17] Lisa C. Harper,et al. MaizeGDB: curation and outreach go hand-in-hand , 2011, Database J. Biol. Databases Curation.
[18] Jörg D. Becker,et al. Whole Genome Analysis of Gene Expression Reveals Coordinated Activation of Signaling and Metabolic Pathways during Pollen-Pistil Interactions in Arabidopsis1[C][W] , 2011, Plant Physiology.
[19] Jason A. Papin,et al. Functional integration of a metabolic network model and expression data without arbitrary thresholding , 2011, Bioinform..
[20] Hoo Sun Chung,et al. A Critical Role for the TIFY Motif in Repression of Jasmonate Signaling by a Stabilized Splice Variant of the JASMONATE ZIM-Domain Protein JAZ10 in Arabidopsis[C][W] , 2009, The Plant Cell Online.
[21] Kazuki Saito,et al. Comprehensive Flavonol Profiling and Transcriptome Coexpression Analysis Leading to Decoding Gene–Metabolite Correlations in Arabidopsis[W][OA] , 2008, The Plant Cell Online.
[22] Imre Vastrik,et al. Arabidopsis Reactome : A Foundation Knowledgebase for Plant Systems Biology , 2008 .
[23] J. Micol,et al. The JAZ family of repressors is the missing link in jasmonate signalling , 2007, Nature.
[24] Nicholas J. Provart,et al. An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets , 2007, PloS one.
[25] T. Kohchi,et al. The tify family previously known as ZIM. , 2007, Trends in plant science.
[26] Kexue Li,et al. Arabidopsis EIN2 modulates stress response through abscisic acid response pathway , 2007, Plant Molecular Biology.
[27] E. Bornberg-Bauer,et al. The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. , 2007, The Plant journal : for cell and molecular biology.
[28] Jing Liu,et al. Dynamic analysis of ABA accumulation in relation to the rate of ABA catabolism in maize tissues under water deficit. , 2006, Journal of experimental botany.
[29] P. Zimmermann,et al. GENEVESTIGATOR. Arabidopsis Microarray Database and Analysis Toolbox1[w] , 2004, Plant Physiology.
[30] W. Gray. Hormonal Regulation of Plant Growth and Development , 2004, Advances in Agricultural Biotechnology.
[31] V. Shulaev,et al. When Defense Pathways Collide. The Response of Arabidopsis to a Combination of Drought and Heat Stress1[w] , 2004, Plant Physiology.
[32] Benjamin M. Bolstad,et al. affy - analysis of Affymetrix GeneChip data at the probe level , 2004, Bioinform..
[33] Sergei Egorov,et al. Pathway studio - the analysis and navigation of molecular networks , 2003, Bioinform..
[34] A. Altman,et al. Plant responses to drought, salinity and extreme temperatures: towards genetic engineering for stress tolerance , 2003, Planta.
[35] Rafael A Irizarry,et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. , 2003, Biostatistics.
[36] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[37] H. Bohnert,et al. Genomic approaches to plant stress tolerance. , 2000, Current opinion in plant biology.
[38] Ronald W. Davis,et al. Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray , 1995, Science.
[39] R. Mittler,et al. Abiotic stress, the field environment and stress combination. , 2006, Trends in plant science.
[40] Nick James,et al. NASCArrays: a repository for microarray data generated by NASC's transcriptomics service , 2004, Nucleic Acids Res..