Sequencing Genes and Gene Islands by Gene Enrichment
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[1] Vincent J. Magrini,et al. Extending assembly of short DNA sequences to handle error , 2007, Bioinform..
[2] T. Mikkelsen,et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells , 2007, Nature.
[3] M. Wang,et al. Phylogenetic and expression analysis of ZnF-AN1 genes in plants. , 2007, Genomics.
[4] P. Schnable,et al. SNP discovery via 454 transcriptome sequencing , 2007, The Plant journal : for cell and molecular biology.
[5] Haixu Tang,et al. Genome assembly, rearrangement, and repeats. , 2007, Chemical reviews.
[6] P. Rabinowicz. Plant genomic sequencing using gene-enriched libraries. , 2007, Chemical reviews.
[7] R. Doerge,et al. Epigenetic Natural Variation in Arabidopsis thaliana , 2007, PLoS biology.
[8] A. Mortazavi,et al. Genome-Wide Mapping of in Vivo Protein-DNA Interactions , 2007, Science.
[9] Dustin E. Schones,et al. High-Resolution Profiling of Histone Methylations in the Human Genome , 2007, Cell.
[10] T. Brutnell,et al. Generating Novel Allelic Variation Through Activator Insertional Mutagenesis in Maize , 2007, Genetics.
[11] G. Klein,et al. Array-CGH and multipoint FISH to decode complex chromosomal rearrangements , 2006, BMC Genomics.
[12] René L. Warren,et al. Assembling millions of short DNA sequences using SSAKE , 2006, Bioinform..
[13] W Brad Barbazuk,et al. Gene discovery and annotation using LCM-454 transcriptome sequencing. , 2006, Genome research.
[14] Changhe Yu,et al. Construction of methylation-sensitive partial restriction bacterial artificial chromosome libraries in maize. , 2006, Analytical biochemistry.
[15] Wei Zhu,et al. The TIGR Plant Transcript Assemblies database , 2006, Nucleic Acids Res..
[16] Patrick S Schnable,et al. Genetic Dissection of Intermated Recombinant Inbred Lines Using a New Genetic Map of Maize , 2006, Genetics.
[17] Edwin Cuppen,et al. Diversity of microRNAs in human and chimpanzee brain , 2006, Nature Genetics.
[18] Agnes P Chan,et al. Uneven chromosome contraction and expansion in the maize genome. , 2006, Genome research.
[19] M. Pellegrini,et al. Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis , 2006, Cell.
[20] Viktoriya Coneva,et al. The maize INDETERMINATE1 flowering time regulator defines a highly conserved zinc finger protein family in higher plants , 2006, BMC Genomics.
[21] I. Henderson,et al. Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning , 2006, Nature Genetics.
[22] Sarah Hake,et al. Advances in maize genomics: the emergence of positional cloning. , 2006, Current opinion in plant biology.
[23] J. Bennetzen,et al. The maize genome as a model for efficient sequence analysis of large plant genomes. , 2006, Current opinion in plant biology.
[24] D. Galbraith,et al. DESIGN, PRODUCTION, AND UTILIZATION OF LONG OLIGONUCLEOTIDE MICROARRAYS FOR EXPRESSION ANALYSIS IN MAIZE , 2005 .
[25] B. Birren,et al. Structure and Architecture of the Maize Genome1[W] , 2005, Plant Physiology.
[26] Carolyn J. Lawrence-Dill,et al. Comparative Plant Genomics Resources at PlantGDB1 , 2005, Plant Physiology.
[27] W. McCombie,et al. Differential methylation of genes and repeats in land plants. , 2005, Genome research.
[28] J. Bennetzen,et al. Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries. , 2005, Genome research.
[29] James R. Knight,et al. Genome sequencing in microfabricated high-density picolitre reactors , 2005, Nature.
[30] K. Koch,et al. Steady-state transposon mutagenesis in inbred maize. , 2005, The Plant journal : for cell and molecular biology.
[31] J. Bedell,et al. Reduced representation sequencing: a success in maize and a promise for other plant genomes. , 2005, BioEssays : news and reviews in molecular, cellular and developmental biology.
[32] Nathan M. Springer,et al. Evolutionary Divergence of Monocot and Dicot Methyl-CpG-Binding Domain Proteins1[w] , 2005, Plant Physiology.
[33] John Quackenbush,et al. The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes , 2004, Nucleic Acids Res..
[34] Jianxin Ma,et al. Consistent over-estimation of gene number in complex plant genomes. , 2004, Current opinion in plant biology.
[35] James O. Allen,et al. Sequence and Comparative Analysis of the Maize NB Mitochondrial Genome1[w] , 2004, Plant Physiology.
[36] J. Bennetzen,et al. Gene loss and movement in the maize genome. , 2004, Genome research.
[37] Nathan M. Springer,et al. Utility of Different Gene Enrichment Approaches Toward Identifying and Sequencing the Maize Gene Space1[w] , 2004, Plant Physiology.
[38] Jianxin Ma,et al. Close split of sorghum and maize genome progenitors. , 2004, Genome research.
[39] Michael Black,et al. Role of transposable elements in heterochromatin and epigenetic control , 2004, Nature.
[40] Lisa M. D'Souza,et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution , 2004, Nature.
[41] Michael Freeling,et al. Genomic duplication, fractionation and the origin of regulatory novelty. , 2004, Genetics.
[42] Srinivas Aluru,et al. A strategy for assembling the maize (Zea mays L.) genome , 2004, Bioinform..
[43] Gregory D. Schuler,et al. Database resources of the National Center for Biotechnology Information: update , 2004, Nucleic acids research.
[44] J Quackenbush,et al. Enrichment of Gene-Coding Sequences in Maize by Genome Filtration , 2003, Science.
[45] S. Dike,et al. Maize Genome Sequencing by Methylation Filtration , 2003, Science.
[46] S. Lowe,et al. Genes and transposons are differentially methylated in plants, but not in mammals. , 2003, Genome research.
[47] J. Bennetzen,et al. A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[48] L. Stein,et al. Maize-targeted mutagenesis: A knockout resource for maize , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[49] Carolyn Thomas,et al. High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis. , 2003, Genomics.
[50] Yinan Yuan,et al. High-Cot sequence analysis of the maize genome. , 2003, The Plant journal : for cell and molecular biology.
[51] John Quackenbush,et al. TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets , 2003, Bioinform..
[52] Colin N. Dewey,et al. Initial sequencing and comparative analysis of the mouse genome. , 2002 .
[53] J. Bennetzen,et al. Methylation-spanning linker libraries link gene-rich regions and identify epigenetic boundaries in Zea mays. , 2002, Genome research.
[54] M. Adams,et al. Recent Segmental Duplications in the Human Genome , 2002, Science.
[55] Daniel G Peterson,et al. Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery. , 2002, Genome research.
[56] S. Kingsmore,et al. Comprehensive human genome amplification using multiple displacement amplification , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[57] J. Bennetzen,et al. National Science Foundation-sponsored workshop report. Maize genome sequencing project. , 2001, Plant physiology.
[58] M. Morgante,et al. Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome. , 2001, Genome research.
[59] V. Walbot,et al. Somatic and Germinal Mobility of the RescueMu Transposon in Transgenic Maize , 2001, The Plant Cell Online.
[60] T. Kakutani,et al. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis , 2001, Nature.
[61] R. Matyášek,et al. Cytosine methylation of plastid genome in higher plants. Fact or artefact? , 2001, Plant science : an international journal of experimental plant biology.
[62] R. Martienssen,et al. Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1). , 2001, Genes & development.
[63] The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.
[64] C. Soderlund,et al. Contigs built with fingerprints, markers, and FPC V4.7. , 2000, Genome research.
[65] K. Edwards,et al. Identification of transposon-tagged genes by the random sequencing of Mutator-tagged DNA fragments from Zea mays. , 2000, The Plant journal : for cell and molecular biology.
[66] B. Burr,et al. International Rice Genome Sequencing Project: the effort to completely sequence the rice genome. , 2000, Current opinion in plant biology.
[67] Eugene W. Myers,et al. A whole-genome assembly of Drosophila. , 2000, Science.
[68] Eric S. Lander,et al. Journey to the Center of Biology , 2000, Science.
[69] Robert A. Martienssen,et al. Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome , 1999, Nature Genetics.
[70] X. Huang,et al. CAP3: A DNA sequence assembly program. , 1999, Genome research.
[71] Marco Marra,et al. A map for sequence analysis of the Arabidopsis thaliana genome , 1999, Nature Genetics.
[72] Andrew Smith. Genome sequence of the nematode C-elegans: A platform for investigating biology , 1998 .
[73] Phillip SanMiguel,et al. Evidence that a Recent Increase in Maize Genome Size was Caused by the Massive Amplification of Intergene Retrotransposons , 1998 .
[74] Carol Soderlund,et al. FPC: a system for building contigs from restriction fingerprinted clones , 1997, Comput. Appl. Biosci..
[75] B. Gaut,et al. DNA sequence evidence for the segmental allotetraploid origin of maize. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[76] J. Bennetzen,et al. Nested Retrotransposons in the Intergenic Regions of the Maize Genome , 1996, Science.
[77] B. Barrell,et al. Life with 6000 Genes , 1996, Science.
[78] M. Soares,et al. Normalization and subtraction: two approaches to facilitate gene discovery. , 1996, Genome research.
[79] R. Fleischmann,et al. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.
[80] M. Soares,et al. Construction and characterization of a normalized cDNA library. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[81] J. Kangasjärvi,et al. Plastid DNA in developing maize endosperm : genome structure, methylation, and transcript accumulation patterns. , 1992, Plant physiology.
[82] E. Raleigh,et al. McrBC: a multisubunit GTP-dependent restriction endonuclease. , 1992, Journal of molecular biology.
[83] A. Kerlavage,et al. Complementary DNA sequencing: expressed sequence tags and human genome project , 1991, Science.
[84] S. Weissman,et al. Construction of a uniform-abundance (normalized) cDNA library. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[85] B. Slatko,et al. Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12 , 1990, Journal of bacteriology.
[86] B. Burr,et al. Gene mapping with recombinant inbreds in maize. , 1988, Genetics.
[87] E. Raleigh,et al. Escherichia coli K-12 restricts DNA containing 5-methylcytosine. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[88] Virginia Walbot,et al. The genome of Zea mays, its organization and homology to related grasses , 1980, Chromosoma.
[89] S. Henikoff,et al. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription , 2007, Nature Genetics.
[90] P. Schnable,et al. Turning repeats to advantage: scaffolding genomic contigs using LTR retrotransposons. , 2006, Computational systems bioinformatics. Computational Systems Bioinformatics Conference.
[91] Genomes and evolution , 2006 .
[92] E. Mauceli,et al. Whole-genome sequence assembly for mammalian genomes: Arachne 2. , 2003, Genome research.
[93] B. Berger,et al. ARACHNE: a whole-genome shotgun assembler. , 2002, Genome research.
[94] Owen White,et al. TIGR Assembler: A New Tool for Assembling Large Shotgun Sequencing Projects , 1995 .
[95] D. Bullock,et al. Nuclear DNA content in F1 hybrids of maize , 1993, Heredity.