Gene expression changes governing extreme dehydration tolerance in an Antarctic insect

Among terrestrial organisms, arthropods are especially susceptible to dehydration, given their small body size and high surface area to volume ratio. This challenge is particularly acute for polar arthropods that face near-constant desiccating conditions, as water is frozen and thus unavailable for much of the year. The molecular mechanisms that govern extreme dehydration tolerance in insects remain largely undefined. In this study, we used RNA sequencing to quantify transcriptional mechanisms of extreme dehydration tolerance in the Antarctic midge, Belgica antarctica, the world’s southernmost insect and only insect endemic to Antarctica. Larvae of B. antarctica are remarkably tolerant of dehydration, surviving losses up to 70% of their body water. Gene expression changes in response to dehydration indicated up-regulation of cellular recycling pathways including the ubiquitin-mediated proteasome and autophagy, with concurrent down-regulation of genes involved in general metabolism and ATP production. Metabolomics results revealed shifts in metabolite pools that correlated closely with changes in gene expression, indicating that coordinated changes in gene expression and metabolism are a critical component of the dehydration response. Finally, using comparative genomics, we compared our gene expression results with a transcriptomic dataset for the Arctic collembolan, Megaphorura arctica. Although B. antarctica and M. arctica are adapted to similar environments, our analysis indicated very little overlap in expression profiles between these two arthropods. Whereas several orthologous genes showed similar expression patterns, transcriptional changes were largely species specific, indicating these polar arthropods have developed distinct transcriptional mechanisms to cope with similar desiccating conditions.

[1]  D. Denlinger,et al.  Expression of genes involved in energy mobilization and osmoprotectant synthesis during thermal and dehydration stress in the Antarctic midge, Belgica antarctica , 2012, Journal of Comparative Physiology B.

[2]  D. Renault,et al.  Combined transcriptomic and metabolomic approach uncovers molecular mechanisms of cold tolerance in a temperate flesh fly. , 2012, Physiological genomics.

[3]  Guiyun Yan,et al.  Genome-Wide Transcriptional Analysis of Genes Associated with Acute Desiccation Stress in Anopheles gambiae , 2011, PloS one.

[4]  J. Brodsky,et al.  Function and immuno-localization of aquaporins in the Antarctic midge Belgica antarctica. , 2011, Journal of insect physiology.

[5]  D. Denlinger,et al.  Functional characterization of an aquaporin in the Antarctic midge Belgica antarctica. , 2011, Journal of insect physiology.

[6]  V. Košťál,et al.  Hyperprolinemic larvae of the drosophilid fly, Chymomyza costata, survive cryopreservation in liquid nitrogen , 2011, Proceedings of the National Academy of Sciences.

[7]  Peter Agre,et al.  Aquaporin water channel AgAQP1 in the malaria vector mosquito Anopheles gambiae during blood feeding and humidity adaptation , 2011, Proceedings of the National Academy of Sciences.

[8]  M. Toner,et al.  LEA proteins during water stress: not just for plants anymore. , 2011, Annual review of physiology.

[9]  K. Mita,et al.  Identification of Anhydrobiosis-related Genes from an Expressed Sequence Tag Database in the Cryptobiotic Midge Polypedilum vanderplanki (Diptera; Chironomidae) , 2010, The Journal of Biological Chemistry.

[10]  D. Rubinsztein,et al.  Mechanisms of cross‐talk between the ubiquitin‐proteasome and autophagy‐lysosome systems , 2010, FEBS letters.

[11]  W. Huber,et al.  which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .

[12]  Mark H. Ellisman,et al.  Sestrin as a Feedback Inhibitor of TOR That Prevents Age-Related Pathologies , 2010, Science.

[13]  D. Denlinger,et al.  Heat shock proteins contribute to mosquito dehydration tolerance. , 2010, Journal of insect physiology.

[14]  Matthew D. Young,et al.  Gene ontology analysis for RNA-seq: accounting for selection bias , 2010, Genome Biology.

[15]  B. Ylstra,et al.  Sugar sweet springtails: on the transcriptional response of Folsomia candida (Collembola) to desiccation stress , 2009, Insect molecular biology.

[16]  D. Klionsky,et al.  Regulation mechanisms and signaling pathways of autophagy. , 2009, Annual review of genetics.

[17]  L. Matzkin,et al.  Transcriptional Regulation of Metabolism Associated With the Increased Desiccation Resistance of the Cactophilic Drosophila mojavensis , 2009, Genetics.

[18]  G. Burns,et al.  Surviving the cold: molecular analyses of insect cryoprotective dehydration in the Arctic springtail Megaphorura arctica (Tullberg) , 2009, BMC Genomics.

[19]  Lior Pachter,et al.  Sequence Analysis , 2020, Definitions.

[20]  Joshua B. Benoit,et al.  Dehydration, rehydration, and overhydration alter patterns of gene expression in the Antarctic midge, Belgica antarctica , 2009, Journal of Comparative Physiology B.

[21]  Christian Hermans,et al.  Proline accumulation in plants: a review , 2008, Amino Acids.

[22]  D. Denlinger,et al.  Cryoprotective dehydration and the resistance to inoculative freezing in the Antarctic midge, Belgica antarctica , 2008, Journal of Experimental Biology.

[23]  Guido Kroemer,et al.  Self-eating and self-killing: crosstalk between autophagy and apoptosis , 2007, Nature Reviews Molecular Cell Biology.

[24]  D. Denlinger,et al.  Mechanisms to reduce dehydration stress in larvae of the Antarctic midge, Belgica antarctica. , 2007, Journal of insect physiology.

[25]  D. Denlinger,et al.  Slow dehydration promotes desiccation and freeze tolerance in the Antarctic midge Belgica antarctica , 2007, Journal of Experimental Biology.

[26]  R. Tibshirani,et al.  On testing the significance of sets of genes , 2006, math/0610667.

[27]  D. Denlinger,et al.  Continuous up-regulation of heat shock proteins in larvae, but not adults, of a polar insect , 2006, Proceedings of the National Academy of Sciences.

[28]  Juan Miguel García-Gómez,et al.  BIOINFORMATICS APPLICATIONS NOTE Sequence analysis Manipulation of FASTQ data with Galaxy , 2005 .

[29]  Hervé Tricoire,et al.  BMC Genomics BioMed Central , 2004 .

[30]  J. Bale,et al.  Feeding studies on Onychiurus arcticus (Tullberg) (Collembola: Onychiuridae) on West Spitsbergen , 2004, Polar Biology.

[31]  Toshio Kojima,et al.  Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression , 2004, BMC Genomics.

[32]  A. Goldberg,et al.  Protein degradation and protection against misfolded or damaged proteins , 2003, Nature.

[33]  T. Markow,et al.  Effects of starvation and desiccation on energy metabolism in desert and mesic Drosophila. , 2003, Journal of insect physiology.

[34]  Steven J. M. Jones,et al.  A SAGE Approach to Discovery of Genes Involved in Autophagic Cell Death , 2003, Current Biology.

[35]  S. Chown Respiratory water loss in insects. , 2002, Comparative biochemistry and physiology. Part A, Molecular & integrative physiology.

[36]  M. Holmstrup,et al.  Supercool or dehydrate? An experimental analysis of overwintering strategies in small permeable arctic invertebrates , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[37]  K. White,et al.  Diverse domains of THREAD/DIAP1 are required to inhibit apoptosis induced by REAPER and HID in Drosophila. , 2000, Genetics.

[38]  M. Feder,et al.  Heat-shock proteins, molecular chaperones, and the stress response: evolutionary and ecological physiology. , 1999, Annual review of physiology.

[39]  R. Morimoto,et al.  Regulation of the Heat Shock Transcriptional Response: Cross Talk between a Family of Heat Shock Factors, Molecular Chaperones, and Negative Regulators the Heat Shock Factor Family: Redundancy and Specialization , 2022 .

[40]  A. Gibbs Water-Proofing Properties of Cuticular Lipids' , 1998 .

[41]  M. Worland,et al.  Partial desiccation induced by sub-zero temperatures as a component of the survival strategy of the Arctic collembolan Onychiurus arcticus (Tullberg). , 1998, Journal of insect physiology.

[42]  R. Hanson,et al.  Regulation of phosphoenolpyruvate carboxykinase (GTP) gene expression. , 1997, Annual review of biochemistry.

[43]  M. Rose,et al.  Physiological mechanisms of evolved desiccation resistance in Drosophila melanogaster. , 1997, The Journal of experimental biology.

[44]  Y. Benjamini,et al.  Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .

[45]  A. D. Kennedy Water as a Limiting Factor in the Antarctic Terrestrial Environment: A Biogeographical Synthesis , 1993 .