Finding missing links in interaction networks
暂无分享,去创建一个
[1] K. McCann,et al. Consistent role of weak and strong interactions in high- and low-diversity trophic food webs , 2016, Nature Communications.
[2] Dominique Gravel,et al. A common framework for identifying linkage rules across different types of interactions , 2015, bioRxiv.
[3] Pedro Jordano,et al. Sampling networks of ecological interactions , 2015, bioRxiv.
[4] P. Suñé,et al. Positive Outcomes Influence the Rate and Time to Publication, but Not the Impact Factor of Publications of Clinical Trial Results , 2013, PloS one.
[5] Christian Mazza,et al. Statistical Approaches for Inferring and Predicting Food-Web Architecture , 2017 .
[6] Dominique Gravel,et al. Beyond species: why ecological interaction networks vary through space and time , 2014, bioRxiv.
[7] Fernanda S Valdovinos,et al. Mutualistic networks: moving closer to a predictive theory. , 2019, Ecology letters.
[8] Dominique Gravel,et al. The structure of probabilistic networks , 2016 .
[9] R. Paine. Food webs : linkage, interaction strength and community infrastructure , 1980 .
[10] Michael J. O. Pocock,et al. Estimating sampling completeness of interactions in quantitative bipartite ecological networks: incorporating variation in species’ specialisation , 2017, bioRxiv.
[11] Stefano Allesina,et al. Food web models: a plea for groups. , 2009, Ecology letters.
[12] Eugene Seo,et al. Predicting Links in Plant-Pollinator Interaction Networks Using Latent Factor Models With Implicit Feedback , 2018, AAAI.
[13] J. Olesen,et al. Bird–flower visitation networks in the Galápagos unveil a widespread interaction release , 2015, Nature Communications.
[14] C. Graham,et al. Towards a predictive model of species interaction beta diversity. , 2018, Ecology letters.
[15] Owen T Lewis,et al. Guild-specific Patterns of Species Richness and Host Specialization in Plant–herbivore Food Webs from a Tropical Forest , 2022 .
[16] Stefano Allesina,et al. The dimensionality of ecological networks. , 2013, Ecology letters.
[17] Hugo Fort,et al. Abundance and generalisation in mutualistic networks: solving the chicken-and-egg dilemma. , 2016, Ecology letters.
[18] Jane Memmott,et al. Food webs: a ladder for picking strawberries or a practical tool for practical problems? , 2009, Philosophical Transactions of the Royal Society B: Biological Sciences.
[19] Jochen Fründ,et al. Sampling bias is a challenge for quantifying specialization and network structure: lessons from a quantitative niche model , 2016 .
[20] Stefano Allesina,et al. Parasites in food webs: the ultimate missing links , 2008, Ecology letters.
[21] Timothée Poisot,et al. A comparative study of ecological specialization estimators , 2012 .
[22] Anne E. Magurran,et al. Biological Diversity: Frontiers in Measurement and Assessment , 2011 .
[23] Duncan J. Watts,et al. Collective dynamics of ‘small-world’ networks , 1998, Nature.
[24] Phillip P. A. Staniczenko,et al. Predicting the effect of habitat modification on networks of interacting species , 2017, Nature Communications.
[25] Jordi Bascompte,et al. Temporal dynamics in a pollination network. , 2008, Ecology.
[26] José M. Costa,et al. Sampling completeness in seed dispersal networks: When enough is enough , 2016 .
[27] Marlies Sazima,et al. Influences of sampling effort on detected patterns and structuring processes of a Neotropical plant-hummingbird network. , 2016, The Journal of animal ecology.
[28] Clare Gray,et al. FORUM: Ecological networks: the missing links in biomonitoring science , 2014, The Journal of applied ecology.
[29] P. Archambault,et al. No complexity–stability relationship in empirical ecosystems , 2016, Nature Communications.
[30] Dominique Gravel,et al. Analysing ecological networks of species interactions , 2018, Biological reviews of the Cambridge Philosophical Society.
[31] Dominique Gravel,et al. Species traits as drivers of food web structure , 2018 .
[32] J. Bascompte,et al. The modularity of pollination networks , 2007, Proceedings of the National Academy of Sciences.
[33] Ignasi Bartomeus,et al. Understanding Linkage Rules in Plant-Pollinator Networks by Using Hierarchical Models That Incorporate Pollinator Detectability and Plant Traits , 2013, PloS one.
[34] C. M. Collins,et al. Effects of the removal or reduction in density of the malaria mosquito, Anopheles gambiae s.l., on interacting predators and competitors in local ecosystems , 2018, Medical and veterinary entomology.
[35] E. K. Harding. Conservation of species , 2019 .
[36] Michiel Stock,et al. Linear filtering reveals false negatives in species interaction data , 2017, Scientific Reports.
[37] Steven L Chown,et al. The effect of network size and sampling completeness in depauperate networks , 2018, The Journal of animal ecology.
[38] Nico Blüthgen,et al. Why network analysis is often disconnected from community ecology: A critique and an ecologist's guide , 2010 .
[39] Juan Manuel Pastor,et al. Weighted-Interaction Nestedness Estimator (WINE): A new estimator to calculate over frequency matrices , 2008, Environ. Model. Softw..
[40] Stefano Allesina,et al. The ghost of nestedness in ecological networks , 2013, Nature Communications.
[41] Susanne A. Fritz,et al. Ecological, historical and evolutionary determinants of modularity in weighted seed-dispersal networks. , 2014, Ecology letters.
[42] Carsten F. Dormann,et al. Identifying Causes of Patterns in Ecological Networks: Opportunities and Limitations , 2017 .
[43] Anders Nielsen,et al. Conservation of species interaction networks , 2010 .
[44] Stefano Allesina,et al. What Can Interaction Webs Tell Us About Species Roles? , 2015, PLoS Comput. Biol..
[45] J. Bascompte,et al. Invariant properties in coevolutionary networks of plant-animal interactions , 2002 .
[46] Rudolf P. Rohr,et al. Why are some plant–pollinator networks more nested than others? , 2017, The Journal of animal ecology.
[47] Owen T Lewis,et al. Antagonistic interaction networks are structured independently of latitude and host guild , 2013, Ecology letters.
[48] Dominique Gravel,et al. Revealing biases in the sampling of ecological interaction networks , 2017, bioRxiv.
[49] M. Newman,et al. Hierarchical structure and the prediction of missing links in networks , 2008, Nature.
[50] N. Blüthgen,et al. Global dung webs: high trophic generalism of dung beetles along the latitudinal diversity gradient. , 2018, Ecology letters.
[51] B. Guénard,et al. Choices of sampling method bias functional components estimation and ability to discriminate assembly mechanisms , 2019, Methods in Ecology and Evolution.
[52] Teja Tscharntke,et al. Habitat modification alters the structure of tropical host–parasitoid food webs , 2007, Nature.
[53] Judith L Bronstein,et al. Interaction rewiring and the rapid turnover of plant-pollinator networks. , 2017, Ecology letters.
[54] V. Rico-Gray,et al. Sampling effort differences can lead to biased conclusions on the architecture of ant–plant interaction networks , 2016 .
[55] M. Clauss,et al. Carnivory in the common hippopotamus Hippopotamus amphibius: implications for the ecology and epidemiology of anthrax in African landscapes , 2016 .
[56] A. Chao,et al. Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size. , 2012, Ecology.
[57] Kevin M. Clarke,et al. Estimating Species Richness , 2005 .
[58] Werner Ulrich,et al. A consumer's guide to nestedness analysis , 2009 .
[59] Michael B. Bonsall,et al. Trophic interaction modifications: an empirical and theoretical framework , 2017, Ecology letters.
[60] Carlos J. Melián,et al. The nested assembly of plant–animal mutualistic networks , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[61] Dominique Gravel,et al. The dissimilarity of species interaction networks. , 2012, Ecology letters.
[62] N. Blüthgen,et al. Measuring specialization in species interaction networks , 2006, BMC Ecology.
[63] Jordi Bascompte,et al. Ecological networks, nestedness and sampling effort , 2007 .
[64] Sonia Kéfi,et al. Describe, understand and predict: why do we need networks in ecology? , 2016 .
[65] Christian Mazza,et al. Matching–centrality decomposition and the forecasting of new links in networks , 2013, Proceedings of the Royal Society B: Biological Sciences.
[66] Pedro Jordano,et al. Beyond species loss: The extinction of ecological interactions in a changing world , 2015 .
[67] Daniel B. Larremore,et al. Efficiently inferring community structure in bipartite networks , 2014, Physical review. E, Statistical, nonlinear, and soft matter physics.
[68] Benno I. Simmons,et al. Abundance drives generalisation in hummingbird-plant pollination networks , 2018 .
[69] R. Solé,et al. Ecological networks and their fragility , 2006, Nature.
[70] Gabriel Gellner,et al. Potential oscillators and keystone modules in food webs. , 2018, Ecology letters.
[71] Robert K. Colwell,et al. Estimating terrestrial biodiversity through extrapolation. , 1994, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[72] Jochen Fründ,et al. What do interaction network metrics tell us about specialization and biological traits? , 2008, Ecology.
[73] V. Ridoux,et al. Let's go beyond taxonomy in diet description: testing a trait-based approach to prey-predator relationships. , 2014, The Journal of animal ecology.
[74] Ben G. Weinstein,et al. On comparing traits and abundance for predicting species interactions with imperfect detection , 2017 .
[75] D. Vázquez,et al. Evaluating sampling completeness in a desert plant-pollinator network. , 2012, The Journal of animal ecology.
[76] A Rivera-Hutinel,et al. Effects of sampling completeness on the structure of plant-pollinator networks. , 2012, Ecology.
[77] Miguel G. Matias,et al. Inferring biotic interactions from proxies. , 2015, Trends in ecology & evolution.
[78] P. Klinkhamer,et al. Foraging efficiency and size matching in a plant–pollinator community: the importance of sugar content and tongue length , 2019, Ecology letters.
[79] E. Berlow,et al. Strong effects of weak interactions in ecological communities , 1999, Nature.
[80] Jens M. Olesen,et al. Strong Impact of Temporal Resolution on the Structure of an Ecological Network , 2013, PloS one.
[81] David Gosling,et al. Joining The Dots , 2001 .
[82] Evon M. O. Abu-Taieh,et al. Comparative Study , 2020, Definitions.
[83] Lawrence N. Hudson,et al. Joining the dots: An automated method for constructing food webs from compendia of published interactions , 2015 .
[84] A. Chao. Nonparametric estimation of the number of classes in a population , 1984 .
[85] Lloyd Goldwasser,et al. SAMPLING EFFECTS AND THE ESTIMATION OF FOOD‐WEB PROPERTIES , 1997 .
[86] Jordi Bascompte,et al. Missing and forbidden links in mutualistic networks , 2011, Proceedings of the Royal Society B: Biological Sciences.
[87] A. Hastings,et al. Weak trophic interactions and the balance of nature , 1998, Nature.
[88] Philippe Desjardins-Proulx,et al. Ecological interactions and the Netflix problem , 2016, bioRxiv.
[89] J. P. González‐Varo,et al. The Labile Limits of Forbidden Interactions. , 2016, Trends in ecology & evolution.
[90] Jane Memmott,et al. Sampling method influences the structure of plant–pollinator networks , 2011 .
[91] Louis-Félix Bersier,et al. QUANTITATIVE DESCRIPTORS OF FOOD-WEB MATRICES , 2002 .
[92] Xavier Robin,et al. pROC: an open-source package for R and S+ to analyze and compare ROC curves , 2011, BMC Bioinformatics.
[93] M. Pascual,et al. Ecological networks : Linking structure to dynamics in food webs , 2006 .
[94] Marlies Sazima,et al. Processes entangling interactions in communities: forbidden links are more important than abundance in a hummingbird–plant network , 2014, Proceedings of the Royal Society B: Biological Sciences.
[95] Catherine Crea,et al. A new model for ecological networks using species‐level traits , 2016 .
[96] Luciano Cagnolo,et al. Uniting pattern and process in plant-animal mutualistic networks: a review. , 2009, Annals of botany.
[97] Roger Guimerà,et al. Missing and spurious interactions and the reconstruction of complex networks , 2009, Proceedings of the National Academy of Sciences.
[98] Sonia Kéfi,et al. How Structured Is the Entangled Bank? The Surprisingly Simple Organization of Multiplex Ecological Networks Leads to Increased Persistence and Resilience , 2016, PLoS biology.
[99] Jean-Jacques Daudin,et al. Clustering methods differ in their ability to detect patterns in ecological networks , 2015 .