Ruggedness in the folding landscape of protein L
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Shimon Weiss | Shuhuai Yao | Lisa J Lapidus | Marcus Jäger | Yujie Chen | Steven A Waldauer | Olgica Bakajin | William J Wedemeyer | Terry Ball | Stephen J Decamp | Michaela Kopka | Vijay R Singh
[1] M. Gruebele,et al. Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[2] D Baker,et al. Kinetics of folding of the IgG binding domain of peptostreptococcal protein L. , 1997, Biochemistry.
[3] D Baker,et al. Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics. , 2000, Biochemistry.
[4] M. Gruebele. Protein folding: the free energy surface. , 2002, Current opinion in structural biology.
[5] Shuhuai Yao,et al. Improvements in mixing time and mixing uniformity in devices designed for studies of protein folding kinetics. , 2007, Analytical chemistry.
[6] H. Roder,et al. Early kinetic intermediate in the folding of acyl-CoA binding protein detected by fluorescence labeling and ultrarapid mixing , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[7] D J Bicout,et al. Entropic barriers, transition states, funnels, and exponential protein folding kinetics: A simple model , 2008, Protein science : a publication of the Protein Society.
[8] Lisa J. Lapidus,et al. Fast kinetics and mechanisms in protein folding. , 2000, Annual review of biophysics and biomolecular structure.
[9] Benjamin Schuler,et al. Ultrafast dynamics of protein collapse from single-molecule photon statistics , 2007, Proceedings of the National Academy of Sciences.
[10] B. Valeur,et al. Mathematical functions for the analysis of luminescence decays with underlying distributions 1. Kohlrausch decay function (stretched exponential) , 2005 .
[11] Electronic energy transfer in polymers labeled at both ends with fluorescent groups , 2002 .
[12] Qian Yi,et al. Direct evidence for a two‐state protein unfolding transition from hydrogen‐deuterium exchange, mass spectrometry, and NMR , 1996, Protein science : a publication of the Protein Society.
[13] M. Gruebele,et al. Detection-dependent kinetics as a probe of folding landscape microstructure. , 2004, Journal of the American Chemical Society.
[14] W. Wedemeyer,et al. Dynamic similarity of the unfolded states of proteins L and G. , 2007, Biochemistry.
[15] Lisa J Lapidus,et al. How fast is protein hydrophobic collapse? , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[16] J. Onuchic,et al. Theory of protein folding: the energy landscape perspective. , 1997, Annual review of physical chemistry.
[17] Martin Gruebele,et al. Folding at the speed limit , 2003, Nature.
[18] A. Roitberg,et al. Smaller and faster: the 20-residue Trp-cage protein folds in 4 micros. , 2002, Journal of the American Chemical Society.
[19] E. Haas,et al. A general strategy for site-specific double labeling of globular proteins for kinetic FRET studies. , 2002, Bioconjugate chemistry.
[20] J. Hofrichter,et al. Dynamics of Intramolecular Contact Formation in Polypeptides , 2001 .
[21] R. Zwanzig,et al. Diffusion in a rough potential. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[22] D. Baker,et al. Contact order, transition state placement and the refolding rates of single domain proteins. , 1998, Journal of molecular biology.
[23] Athi N. Naganathan,et al. Protein folding kinetics: barrier effects in chemical and thermal denaturation experiments. , 2007, Journal of the American Chemical Society.
[24] J. Hofrichter,et al. Dynamics of intramolecular contact formation in polypeptides: distance dependence of quenching rates in a room-temperature glass. , 2001, Physical review letters.
[25] Lisa J. Lapidus,et al. Protein hydrophobic collapse and early folding steps observed in a microfluidic mixer. , 2007, Biophysical journal.
[26] Soon-Ho Park,et al. Folding dynamics of the B1 domain of protein G explored by ultrarapid mixing , 1999, Nature Structural Biology.
[27] Sheena E. Radford,et al. Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate , 2001, Nature Structural Biology.
[28] D. Baker,et al. Chain collapse can occur concomitantly with the rate-limiting step in protein folding , 1999, Nature Structural Biology.
[29] Michelle L. Scalley,et al. Characterization of the free energy spectrum of peptostreptococcal protein L. , 1997, Folding & design.
[30] H. Roder,et al. Evidence for barrier-limited protein folding kinetics on the microsecond time scale , 1998, Nature Structural Biology.
[31] Lisa J. Lapidus,et al. Effects of denaturants on the dynamics of loop formation in polypeptides. , 2006, Biophysical journal.
[32] Bijan Mohammadi,et al. Optimization of a microfluidic mixer for studying protein folding kinetics. , 2006, Analytical chemistry.
[33] M. Gruebele,et al. Kinetics are probe-dependent during downhill folding of an engineered λ6–85 protein , 2005 .
[34] M. Fayer,et al. Electronic excitation transport on isolated, flexible polymer chains in the amorphous solid state randomly tagged or end tagged with chromophores , 1986 .
[35] E. Henry,et al. Relaxation rate for an ultrafast folding protein is independent of chemical denaturant concentration. , 2007, Journal of the American Chemical Society.
[36] J. Hofrichter,et al. Experimental tests of villin subdomain folding simulations. , 2003, Journal of molecular biology.
[37] R. Austin,et al. Hydrodynamic Focusing on a Silicon Chip: Mixing Nanoliters in Microseconds , 1998 .
[38] D Baker,et al. Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[39] Shimon Weiss,et al. Protein–protein interactions as a tool for site‐specific labeling of proteins , 2005, Protein science : a publication of the Protein Society.
[40] Shimon Weiss,et al. Femtomole mixer for microsecond kinetic studies of protein folding. , 2004, Analytical chemistry.
[41] J. Udgaonkar,et al. Barrierless evolution of structure during the submillisecond refolding reaction of a small protein , 2008, Proceedings of the National Academy of Sciences.