A bird's-eye view of post-translational modifications in the spliceosome and their roles in spliceosome dynamics.
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[1] H. Stark,et al. Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components , 2009, Nature Structural &Molecular Biology.
[2] Jesper V Olsen,et al. Global analysis of the yeast osmotic stress response by quantitative proteomics. , 2009, Molecular bioSystems.
[3] Tracy L. Johnson,et al. Acetylation by the Transcriptional Coactivator Gcn5 Plays a Novel Role in Co-Transcriptional Spliceosome Assembly , 2009, PLoS genetics.
[4] S. Gygi,et al. Global Analysis of Cdk1 Substrate Phosphorylation Sites Provides Insights into Evolution , 2009, Science.
[5] M. Snyder,et al. Global analysis of the glycoproteome in Saccharomyces cerevisiae reveals new roles for protein glycosylation in eukaryotes , 2009, Molecular systems biology.
[6] Eran Segal,et al. Proteome-wide prediction of acetylation substrates , 2009, Proceedings of the National Academy of Sciences.
[7] Jimmy K. Eng,et al. Quantitative Phosphoproteomic Analysis of T Cell Receptor Signaling Reveals System-Wide Modulation of Protein-Protein Interactions , 2009, Science Signaling.
[8] M. Mann,et al. Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions , 2009, Science.
[9] Richard D. Smith,et al. An extensive survey of tyrosine phosphorylation revealing new sites in human mammary epithelial cells. , 2009, Journal of proteome research.
[10] J. Griffiths,et al. A sensitive mass spectrometric method for hypothesis-driven detection of peptide post-translational modifications: multiple reaction monitoring-initiated detection and sequencing (MIDAS) , 2009, Nature Protocols.
[11] Jeroen Krijgsveld,et al. Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. , 2009, Analytical chemistry.
[12] John K. Heath,et al. Large Scale Localization of Protein Phosphorylation by Use of Electron Capture Dissociation Mass Spectrometry , 2009, Molecular & Cellular Proteomics.
[13] Jun Wan,et al. Protein Acetylation Microarray Reveals that NuA4 Controls Key Metabolic Target Regulating Gluconeogenesis , 2009, Cell.
[14] C. Will,et al. The Spliceosome: Design Principles of a Dynamic RNP Machine , 2009, Cell.
[15] Xinning Jiang,et al. Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry. , 2009, Journal of proteome research.
[16] S. Lemieux,et al. The phagosomal proteome in interferon-gamma-activated macrophages. , 2009, Immunity.
[17] M. Bollen,et al. Nuclear Inhibitor of Protein Phosphatase-1 (NIPP1) Directs Protein Phosphatase-1 (PP1) to Dephosphorylate the U2 Small Nuclear Ribonucleoprotein Particle (snRNP) Component, Spliceosome-associated Protein 155 (Sap155)* , 2008, Journal of Biological Chemistry.
[18] Rainer Malik,et al. Evaluation of the low-specificity protease elastase for large-scale phosphoproteome analysis. , 2008, Analytical chemistry.
[19] Sean R. Collins,et al. A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. , 2008, Molecular cell.
[20] Montserrat Carrascal,et al. Phosphorylation analysis of primary human T lymphocytes using sequential IMAC and titanium oxide enrichment. , 2008, Journal of proteome research.
[21] Henning Urlaub,et al. Conservation of the Protein Composition and Electron Microscopy Structure of Drosophila melanogaster and Human Spliceosomal Complexes , 2008, Molecular and Cellular Biology.
[22] H. Urlaub,et al. Stalling of spliceosome assembly at distinct stages by small-molecule inhibitors of protein acetylation and deacetylation. , 2008, RNA.
[23] M. Mann,et al. Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry. , 2008, Journal of proteome research.
[24] Robert D. Finn,et al. InterPro: the integrative protein signature database , 2008, Nucleic Acids Res..
[25] D. V. van Aalten,et al. Molecular mechanisms of O-GlcNAcylation. , 2008, Current opinion in structural biology.
[26] M. Mann,et al. Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. , 2008, Molecular cell.
[27] S. Elledge,et al. A quantitative atlas of mitotic phosphorylation , 2008, Proceedings of the National Academy of Sciences.
[28] R. Lührmann,et al. 3'-cyclic phosphorylation of U6 snRNA leads to recruitment of recycling factor p110 through LSm proteins. , 2008, RNA.
[29] M. Ye,et al. Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis. , 2008, Journal of proteome research.
[30] Samuel H. Payne,et al. A Multidimensional Chromatography Technology for In-depth Phosphoproteome Analysis*S , 2008, Molecular & Cellular Proteomics.
[31] Duncan J. Smith,et al. "Nought may endure but mutability": spliceosome dynamics and the regulation of splicing. , 2008, Molecular cell.
[32] N. Seyfried,et al. Systematic approach for validating the ubiquitinated proteome. , 2008, Analytical chemistry.
[33] E. Sontheimer,et al. A role for ubiquitin in the spliceosome assembly pathway , 2008, Nature Structural &Molecular Biology.
[34] H. Urlaub,et al. Phosphorylation of human PRP28 by SRPK2 is required for integration of the U4/U6-U5 tri-snRNP into the spliceosome , 2008, Nature Structural &Molecular Biology.
[35] H. Urlaub,et al. Isolation of an active step I spliceosome and composition of its RNP core , 2008, Nature.
[36] Xinning Jiang,et al. Large‐scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography , 2008, Proteomics.
[37] B. Lynn,et al. A BBP–Mud2p heterodimer mediates branchpoint recognition and influences splicing substrate abundance in budding yeast , 2008, Nucleic acids research.
[38] S. Gygi,et al. Phosphoproteome analysis of fission yeast. , 2008, Journal of proteome research.
[39] John R Yates,et al. Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis. , 2008, Journal of proteome research.
[40] Stefan Stamm,et al. Regulation of Alternative Splicing by Reversible Protein Phosphorylation* , 2008, Journal of Biological Chemistry.
[41] M. Tomita,et al. Automated Phosphoproteome Analysis for Cultured Cancer Cells by Two-Dimensional NanoLC-MS Using a Calcined Titania/C18 Biphasic Column , 2008, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.
[42] Laura A. Sullivan,et al. Global Survey of Phosphotyrosine Signaling Identifies Oncogenic Kinases in Lung Cancer , 2007, Cell.
[43] T. Hunter. The age of crosstalk: phosphorylation, ubiquitination, and beyond. , 2007, Molecular cell.
[44] Lianshui Wang,et al. Quantitative Phosphoproteome Profiling of Wnt3a-mediated Signaling Network , 2007, Molecular & Cellular Proteomics.
[45] V. Dixit,et al. Targeted mass spectrometric strategy for global mapping of ubiquitination on proteins. , 2007, Rapid communications in mass spectrometry : RCM.
[46] T. Veenstra,et al. Improved titanium dioxide enrichment of phosphopeptides from HeLa cells and high confident phosphopeptide identification by cross-validation of MS/MS and MS/MS/MS spectra. , 2007, Journal of proteome research.
[47] Pei-Jung Lee,et al. Dynamic Interactions of Ntr1-Ntr2 with Prp43 and with U5 Govern the Recruitment of Prp43 To Mediate Spliceosome Disassembly , 2007, Molecular and Cellular Biology.
[48] C. Guthrie,et al. Rapid, transcript-specific changes in splicing in response to environmental stress. , 2007, Molecular cell.
[49] B. Schwer,et al. Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome. , 2007, Genes & development.
[50] Daniel Figeys,et al. A differential phosphoproteomic analysis of retinoic acid-treated P19 cells. , 2007, Journal of proteome research.
[51] Marcus B Smolka,et al. Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases , 2007, Proceedings of the National Academy of Sciences.
[52] S. Valadkhan. The spliceosome: caught in a web of shifting interactions. , 2007, Current opinion in structural biology.
[53] Yingxin Zhao,et al. Toward a global characterization of the phosphoproteome in prostate cancer cells: Identification of phosphoproteins in the LNCaP cell line , 2007, Electrophoresis.
[54] Mary K. Young,et al. Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors , 2007, Nucleic acids research.
[55] B. A. Ballif,et al. ATM and ATR Substrate Analysis Reveals Extensive Protein Networks Responsive to DNA Damage , 2007, Science.
[56] Gerald W. Hart,et al. Cycling of O-linked β-N-acetylglucosamine on nucleocytoplasmic proteins , 2007, Nature.
[57] M. Ares,et al. Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing. , 2007, Genes & development.
[58] C. Guthrie,et al. Transcript Specificity in Yeast Pre-mRNA Splicing Revealed by Mutations in Core Spliceosomal Components , 2007, PLoS biology.
[59] Henning Urlaub,et al. Composition and three‐dimensional EM structure of double affinity‐purified, human prespliceosomal A complexes , 2007, The EMBO journal.
[60] Lewis Y. Geer,et al. Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry , 2007, Proceedings of the National Academy of Sciences.
[61] Suresh Mathivanan,et al. Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry , 2007, Proceedings of the National Academy of Sciences.
[62] Christian Panse,et al. Qualitative and Quantitative Analyses of Protein Phosphorylation in Naive and Stimulated Mouse Synaptosomal Preparations*S , 2007, Molecular & Cellular Proteomics.
[63] Steven P. Gygi,et al. Large-scale phosphorylation analysis of mouse liver , 2007, Proceedings of the National Academy of Sciences.
[64] Scott A Gerber,et al. Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae. , 2007, Journal of proteome research.
[65] M. Mann,et al. Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks , 2006, Cell.
[66] A. Ullrich,et al. Tyrosine phosphorylated Par3 regulates epithelial tight junction assembly promoted by EGFR signaling , 2006, The EMBO journal.
[67] J. Manley,et al. PP1/PP2A phosphatases are required for the second step of Pre-mRNA splicing and target specific snRNP proteins. , 2006, Molecular cell.
[68] Steven P Gygi,et al. A probability-based approach for high-throughput protein phosphorylation analysis and site localization , 2006, Nature Biotechnology.
[69] N. Grishin,et al. Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. , 2006, Molecular cell.
[70] E. C. Small,et al. The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase. , 2006, Molecular cell.
[71] Yingxin Zhao,et al. Phosphoproteomic analysis of the human pituitary , 2006, Pituitary.
[72] Alma L. Burlingame,et al. Comprehensive Identification of Phosphorylation Sites in Postsynaptic Density Preparations*S , 2006, Molecular & Cellular Proteomics.
[73] Erich A Nigg,et al. Phosphoproteome analysis of the human mitotic spindle. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[74] Pierre Baldi,et al. A Tandem Affinity Tag for Two-step Purification under Fully Denaturing Conditions , 2006, Molecular & Cellular Proteomics.
[75] Lan Huang,et al. An Integrated Mass Spectrometry-based Proteomic Approach , 2006, Molecular & Cellular Proteomics.
[76] Animesh Nandi,et al. Global identification of O-GlcNAc-modified proteins. , 2006, Analytical chemistry.
[77] Dongmei Cheng,et al. Proteomic analysis of ubiquitin conjugates in yeast. , 2005, Methods in enzymology.
[78] Masatoshi Hagiwara,et al. Alternative splicing: a new drug target of the post-genome era. , 2005, Biochimica et biophysica acta.
[79] Erik J Sontheimer,et al. Ubiquitin binding by a variant Jab1/MPN domain in the essential pre-mRNA splicing factor Prp8p. , 2005, RNA.
[80] F. Yeh,et al. Spliceosome disassembly catalyzed by Prp43 and its associated components Ntr1 and Ntr2. , 2005, Genes & development.
[81] M. Gerstein,et al. Global analysis of protein phosphorylation in yeast , 2005, Nature.
[82] C. Lenz,et al. Complete MALDI-ToF MS analysis of cross-linked peptide-RNA oligonucleotides derived from nonlabeled UV-irradiated ribonucleoprotein particles. , 2005, RNA.
[83] Mark Gerstein,et al. Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. , 2005, Genes & development.
[84] S. Tenenbaum,et al. Dephosphorylation shows SR proteins the way out. , 2005, Molecular cell.
[85] M. Konarska,et al. Insights into the mechanisms of splicing: more lessons from the ribosome. , 2005, Genes & development.
[86] K. Gevaert,et al. Global phosphoproteome analysis on human HepG2 hepatocytes using reversed‐phase diagonal LC , 2005, Proteomics.
[87] C. Guthrie,et al. The Isy1p component of the NineTeen complex interacts with the ATPase Prp16p to regulate the fidelity of pre-mRNA splicing. , 2005, Genes & development.
[88] R. Mayer,et al. Ubiquitin and ubiquitin-like proteins as multifunctional signals , 2005, Nature Reviews Molecular Cell Biology.
[89] Ruedi Aebersold,et al. Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry , 2005, Nature Methods.
[90] C. Guthrie,et al. Genetic Analysis Reveals a Role for the C Terminus of the Saccharomyces cerevisiae GTPase Snu114 During Spliceosome Activation , 2005, Genetics.
[91] Forest M White,et al. Global phosphoproteome of HT-29 human colon adenocarcinoma cells. , 2005, Journal of proteome research.
[92] J. Beggs,et al. Prp8 protein: at the heart of the spliceosome. , 2005, RNA.
[93] M. Mann,et al. Quantitative Phosphoproteomics Applied to the Yeast Pheromone Signaling Pathway*S , 2005, Molecular & Cellular Proteomics.
[94] Hongtao Yu,et al. Systematic Identification and Analysis of Mammalian Small Ubiquitin-like Modifier Substrates* , 2005, Journal of Biological Chemistry.
[95] J. Rush,et al. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells , 2005, Nature Biotechnology.
[96] K. Gould,et al. Structural and Functional Analysis of Essential pre-mRNA Splicing Factor Prp19p , 2005, Molecular and Cellular Biology.
[97] A. Amerik,et al. Mechanism and function of deubiquitinating enzymes. , 2004, Biochimica et biophysica acta.
[98] C. Pickart,et al. Ubiquitin: structures, functions, mechanisms. , 2004, Biochimica et biophysica acta.
[99] Steven P Gygi,et al. Phosphoproteomic Analysis of the Developing Mouse Brain*S , 2004, Molecular & Cellular Proteomics.
[100] C. Shin,et al. Cell signalling and the control of pre-mRNA splicing , 2004, Nature Reviews Molecular Cell Biology.
[101] Steven P Gygi,et al. Large-scale characterization of HeLa cell nuclear phosphoproteins. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[102] Matthias Mann,et al. A Proteomic Study of SUMO-2 Target Proteins* , 2004, Journal of Biological Chemistry.
[103] Huilin Zhou,et al. Global Analyses of Sumoylated Proteins in Saccharomyces cerevisiae , 2004, Journal of Biological Chemistry.
[104] M. Konarska,et al. Suppression of multiple substrate mutations by spliceosomal prp8 alleles suggests functional correlations with ribosomal ambiguity mutants. , 2004, Molecular cell.
[105] Arthur R Salomon,et al. Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. , 2004, Analytical chemistry.
[106] M. Mumby,et al. Identification of Phosphoproteins and Their Phosphorylation Sites in the WEHI-231 B Lymphoma Cell Line* , 2004, Molecular & Cellular Proteomics.
[107] Jérôme Boudeau,et al. LKB1 is a master kinase that activates 13 kinases of the AMPK subfamily, including MARK/PAR‐1 , 2004, The EMBO journal.
[108] C. Shin,et al. Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock , 2004, Nature.
[109] M. Ares,et al. ATP requirement for Prp5p function is determined by Cus2p and the structure of U2 small nuclear RNA , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[110] Steven P Gygi,et al. A proteomics approach to understanding protein ubiquitination , 2003, Nature Biotechnology.
[111] G. Hart,et al. O‐GlcNAc turns twenty: functional implications for post‐translational modification of nuclear and cytosolic proteins with a sugar , 2003, FEBS letters.
[112] K. Gould,et al. Structural insights into the U-box, a domain associated with multi-ubiquitination , 2003, Nature Structural Biology.
[113] Henning Urlaub,et al. Small Nuclear Ribonucleoprotein Remodeling During Catalytic Activation of the Spliceosome , 2002, Science.
[114] Steven P. Gygi,et al. Comprehensive proteomic analysis of the human spliceosome , 2002, Nature.
[115] M. Bollen,et al. Phosphorylation-dependent Interaction between the Splicing Factors SAP155 and NIPP1* , 2002, The Journal of Biological Chemistry.
[116] Zhi-Ren Liu. p68 RNA Helicase Is an Essential Human Splicing Factor That Acts at the U1 snRNA-5′ Splice Site Duplex , 2002, Molecular and Cellular Biology.
[117] Melanie D Ohi,et al. Characterization of interactions among the Cef1p-Prp19p-associated splicing complex. , 2002, RNA.
[118] Nikolaus Grigorieff,et al. Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. , 2002, RNA.
[119] J. Shabanowitz,et al. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae , 2002, Nature Biotechnology.
[120] B. Chait,et al. Human STAGA Complex Is a Chromatin-Acetylating Transcription Coactivator That Interacts with Pre-mRNA Splicing and DNA Damage-Binding Factors In Vivo , 2001, Molecular and Cellular Biology.
[121] X. Fu,et al. Evidence for a role of Sky1p-mediated phosphorylation in 3' splice site recognition involving both Prp8 and Prp17/Slu4. , 2001, RNA.
[122] K. Nakayama,et al. U Box Proteins as a New Family of Ubiquitin-Protein Ligases* , 2001, The Journal of Biological Chemistry.
[123] N. Tanner,et al. From RNA helicases to RNPases. , 2001, Trends in biochemical sciences.
[124] J. Beggs,et al. Functional contacts with a range of splicing proteins suggest a central role for Brr2p in the dynamic control of the order of events in spliceosomes of Saccharomyces cerevisiae. , 2001, Genetics.
[125] C. Guthrie,et al. Deletion of MUD2, the yeast homolog of U2AF65, can bypass the requirement for sub2, an essential spliceosomal ATPase. , 2001, Genes & development.
[126] W. J. Wu,et al. Cdc42 Stimulates RNA Splicing via the S6 Kinase and a Novel S6 Kinase Target, the Nuclear Cap-binding Complex* , 2000, The Journal of Biological Chemistry.
[127] P. Cohen,et al. The regulation of protein function by multisite phosphorylation--a 25 year update. , 2000, Trends in biochemical sciences.
[128] A. Ciechanover,et al. The ubiquitin system , 2000, Nature Medicine.
[129] Tony Kouzarides,et al. Acetylation: a regulatory modification to rival phosphorylation? , 2000, The EMBO journal.
[130] M. Ares,et al. ATP can be dispensable for prespliceosome formation in yeast. , 2000, Genes & development.
[131] J. Rossi,et al. The first ATPase domain of the yeast 246-kDa protein is required for in vivo unwinding of the U4/U6 duplex. , 1999, RNA.
[132] B. Séraphin,et al. Transient interaction of BBP/ScSF1 and Mud2 with the splicing machinery affects the kinetics of spliceosome assembly. , 1999, RNA.
[133] M. Ares,et al. CUS2, a Yeast Homolog of Human Tat-SF1, Rescues Function of Misfolded U2 through an Unusual RNA Recognition Motif , 1998, Molecular and Cellular Biology.
[134] C. Guthrie,et al. RNA unwinding in U4/U6 snRNPs requires ATP hydrolysis and the DEIH-box splicing factor Brr2 , 1998, Current Biology.
[135] A. Lamond,et al. Spliceosome assembly: The unwinding role of DEAD-box proteins , 1998, Current Biology.
[136] R. Reed,et al. Phosphorylation of spliceosomal protein SAP 155 coupled with splicing catalysis. , 1998, Genes & development.
[137] C. Guthrie,et al. Mechanical Devices of the Spliceosome: Motors, Clocks, Springs, and Things , 1998, Cell.
[138] J. Valcárcel,et al. U2AF65 recruits a novel human DEAD box protein required for the U2 snRNP-branchpoint interaction. , 1997, Genes & development.
[139] J. Valcárcel,et al. The SR protein family: pleiotropic functions in pre-mRNA splicing. , 1996, Trends in biochemical sciences.
[140] J. Woolford,et al. The final stages of spliceosome maturation require Spp2p that can interact with the DEAH box protein Prp2p and promote step 1 of splicing. , 1995, RNA.
[141] A. Lamond,et al. Regulation of mammalian spliceosome assembly by a protein phosphorylation mechanism. , 1994, The EMBO journal.
[142] C. Guthrie,et al. A conformational rearrangement in the spliceosome is dependent on PRP16 and ATP hydrolysis. , 1992, The EMBO journal.
[143] R. Lührmann,et al. Immunoaffinity purification of a [U4/U6.U5] tri-snRNP from human cells. , 1991, Genes & development.
[144] C. Guthrie,et al. PRP16 is an RNA-dependent ATPase that interacts transiently with the spliceosome , 1991, Nature.
[145] R. Fluhr. Regulation of splicing by protein phosphorylation. , 2008, Current topics in microbiology and immunology.
[146] R. Zeng,et al. Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry. , 2007, Journal of proteome research.
[147] M. Moore,et al. Spliceosome assembly and composition. , 2007, Advances in experimental medicine and biology.
[148] M. Mann,et al. Large-scale Proteomic Analysis of the Human Spliceosome References , 2006 .
[149] P. P. Di Fiore,et al. Signaling through monoubiquitination. , 2004, Current topics in microbiology and immunology.
[150] Roger E. Moore,et al. Composition and functional characterization of the yeast spliceosomal penta-snRNP. , 2002, Molecular cell.
[151] R. Jackups,et al. Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factor. , 2001, Molecular cell.
[152] B. Blencowe,et al. SR-related proteins and the processing of messenger RNA precursors. , 1999, Biochemistry and cell biology = Biochimie et biologie cellulaire.
[153] C. Guthrie,et al. An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28p. , 1999, Molecular cell.
[154] J. Bell,et al. SR protein kinases: the splice of life. , 1999, Biochemistry and cell biology = Biochimie et biologie cellulaire.
[155] Baris E. Suzek,et al. BMC Bioinformatics BioMed Central Database Infrastructure for the life sciences: design and implementation of , 2022 .