A thermodynamic framework for modelling membrane transporters.
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[1] P. Gawthrop,et al. A Thermodynamic Framework for Modelling Membrane Transporters , 2019, Biophysical Journal.
[2] Edmund J. Crampin,et al. Biomolecular System Energetics , 2018, 1803.09231.
[3] Edmund J Crampin,et al. Bond graph modelling of the cardiac action potential: implications for drift and non-unique steady states , 2018, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.
[4] Michael P H Stumpf,et al. How to deal with parameters for whole-cell modelling , 2017, Journal of The Royal Society Interface.
[5] Gary R. Mirams,et al. Sinusoidal voltage protocols for rapid characterisation of ion channel kinetics , 2018, The Journal of physiology.
[6] Peter J. Gawthrop,et al. Bond Graph Modeling of Chemiosmotic Biomolecular Energy Transduction , 2016, IEEE Transactions on NanoBioscience.
[7] Edmund J Crampin,et al. Energy-based analysis of biomolecular pathways , 2016, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.
[8] Edmund J. Crampin,et al. Bond graph modelling of chemoelectrical energy transduction , 2015, 1512.00956.
[9] Edmund J Crampin,et al. Modular bond-graph modelling and analysis of biomolecular systems. , 2015, IET systems biology.
[10] E. Crampin,et al. Regulation of cardiac cellular bioenergetics: mechanisms and consequences , 2015, Physiological reports.
[11] Edmund J. Crampin,et al. Hierarchical bond graph modelling of biochemical networks , 2015, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.
[12] Edmund J. Crampin,et al. Virtual Reference Environments: a simple way to make research reproducible , 2014, Briefings Bioinform..
[13] Joseph L Greenstein,et al. Superresolution Modeling of Calcium Release in the Heart , 2014, Biophysical journal.
[14] Edmund J Crampin,et al. Energy-based analysis of biochemical cycles using bond graphs , 2014, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.
[15] M. Esposito,et al. Irreversible thermodynamics of open chemical networks. I. Emergent cycles and broken conservation laws. , 2014, The Journal of chemical physics.
[16] Singiresu S Rao,et al. A Comparative Study of Evidence Theories in the Modeling, Analysis, and Design of Engineering Systems , 2013 .
[17] B. Thorens,et al. The SLC2 (GLUT) family of membrane transporters. , 2013, Molecular aspects of medicine.
[18] Eric A. Sobie,et al. Dynamics of calcium sparks and calcium leak in the heart. , 2011, Biophysical journal.
[19] J. Ingwall,et al. Compromised Myocardial Energetics in Hypertrophied Mouse Hearts Diminish the Beneficial Effect of Overexpressing SERCA2a , 2011, The Journal of Biological Chemistry.
[20] Henggui Zhang,et al. Cardiac cell modelling: observations from the heart of the cardiac physiome project. , 2011, Progress in biophysics and molecular biology.
[21] Keng C. Soh,et al. Network thermodynamics in the post-genomic era. , 2010, Current opinion in microbiology.
[22] Edda Klipp,et al. Modular rate laws for enzymatic reactions: thermodynamics, elasticities and implementation , 2010, Bioinform..
[23] Wolfgang Borutzky,et al. Bond Graph Methodology , 2010 .
[24] Yoram Rudy,et al. Uniqueness and stability of action potential models during rest, pacing, and conduction using problem-solving environment. , 2009, Biophysical journal.
[25] E. Crampin,et al. A thermodynamic model of the cardiac sarcoplasmic/endoplasmic Ca(2+) (SERCA) pump. , 2009, Biophysical journal.
[26] R. Hajjar,et al. The cardiac sarcoplasmic/endoplasmic reticulum calcium ATPase: a potent target for cardiovascular diseases , 2008, Nature Clinical Practice Cardiovascular Medicine.
[27] Hong Qian,et al. Chemical Biophysics: Quantitative Analysis of Cellular Systems , 2008 .
[28] H. Anton,et al. Elementary linear algebra : applications version , 2008 .
[29] Jonna R. Terkildsen,et al. The balance between inactivation and activation of the Na+-K+ pump underlies the triphasic accumulation of extracellular K+ during myocardial ischemia. , 2007, American journal of physiology. Heart and circulatory physiology.
[30] Edmund J. Crampin,et al. Computational biology of cardiac myocytes: proposed standards for the physiome , 2007, Journal of Experimental Biology.
[31] Anuradha Kalyanasundaram,et al. SERCA pump isoforms: Their role in calcium transport and disease , 2007, Muscle & nerve.
[32] P. Gawthrop,et al. Bond-graph modeling , 2007, IEEE Control Systems.
[33] N P Smith,et al. Development of models of active ion transport for whole-cell modelling: cardiac sodium-potassium pump as a case study. , 2004, Progress in biophysics and molecular biology.
[34] S. Hwang. Nonequilibrium Thermodynamics of Membrane Transport , 2004 .
[35] D. F. Gray,et al. Dependence of Na+-K+ pump current-voltage relationship on intracellular Na+, K+, and Cs+ in rabbit cardiac myocytes. , 2002, American journal of physiology. Cell physiology.
[36] L. Meis. Ca2+-ATPases (SERCA): Energy Transduction and Heat Production in Transport ATPases , 2002, The Journal of Membrane Biology.
[37] I. Glynn,et al. A hundred years of sodium pumping. , 2002, Annual review of physiology.
[38] Y Rudy,et al. Ionic charge conservation and long-term steady state in the Luo-Rudy dynamic cell model. , 2001, Biophysical journal.
[39] H. Glitsch,et al. Electrophysiology of the sodium-potassium-ATPase in cardiac cells. , 2001, Physiological reviews.
[40] Belkacem Ould Bouamama,et al. Modelling and Simulation in Thermal and Chemical Engineering , 2000 .
[41] M. Blaustein,et al. Sodium/calcium exchange: its physiological implications. , 1999, Physiological reviews.
[42] James P. Keener,et al. Mathematical physiology , 1998 .
[43] E. Bamberg,et al. Na+,K(+)-ATPase pump currents in giant excised patches activated by an ATP concentration jump. , 1996, Biophysical journal.
[44] Peter J. Gawthrop,et al. Metamodelling: for bond graphs and dynamic systems , 1996 .
[45] James Kennedy,et al. Particle swarm optimization , 2002, Proceedings of ICNN'95 - International Conference on Neural Networks.
[46] J. Daut,et al. The energy expenditure of actomyosin‐ATPase, Ca(2+)‐ATPase and Na+,K(+)‐ATPase in guinea‐pig cardiac ventricular muscle. , 1994, The Journal of physiology.
[47] C. Luo,et al. A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes. , 1994, Circulation research.
[48] C. Luo,et al. A dynamic model of the cardiac ventricular action potential. II. Afterdepolarizations, triggered activity, and potentiation. , 1994, Circulation research.
[49] D. Gadsby,et al. [Na] and [K] dependence of the Na/K pump current-voltage relationship in guinea pig ventricular myocytes , 1989, The Journal of general physiology.
[50] R. M. Harris,et al. Physical chemistry for the life sciences , 1980, Nature.
[51] Ching-hsiang Hung,et al. The Moore-Penrose inverse of a partitioned matrix ? , 1975 .
[52] R. Veech,et al. The equilibrium constants of the adenosine triphosphate hydrolysis and the adenosine triphosphate-citrate lyase reactions. , 1973, The Journal of biological chemistry.
[53] A Katchalsky,et al. Network thermodynamics: dynamic modelling of biophysical systems , 1973, Quarterly Reviews of Biophysics.
[54] W. Hasselbach,et al. ATP synthesis by the reverse of the sarcoplasmic calcium pump , 1971, FEBS letters.