Delayed Comparison and Apriori Algorithm (DCAA): A Tool for Discovering Protein–Protein Interactions From Time-Series Phosphoproteomic Data
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Daoyuan Li | Lianhong Ding | Peng Shi | Shucui Zhang | Hangyu Shen | Huaqiang Zhong | Shaoshuai Xie | Lianli Chi | Qunye Zhang | Lianhong Ding | L. Chi | Qunye Zhang | Shucui Zhang | Peng Shi | Shaoshuai Xie | Daoyuan Li | Huaqiang Zhong | Hangyu Shen | Lianli Chi
[1] Erh-Min Lai,et al. Protein-Protein Interactions: Co-Immunoprecipitation. , 2017, Methods in molecular biology.
[2] Stefano Teso,et al. Improved multi-level protein–protein interaction prediction with semantic-based regularization , 2014, BMC Bioinformatics.
[3] Adrian V. Lee,et al. An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics , 2018, Cell.
[4] Yang Zhang,et al. COFACTOR: improved protein function prediction by combining structure, sequence and protein–protein interaction information , 2017, Nucleic Acids Res..
[5] Vesteinn Thorsson,et al. Abstract 3287: An integrated TCGA pan-cancer clinical data resource to drive high quality survival outcome analytics , 2018, Bioinformatics and Systems Biology.
[6] Ioannis Xenarios,et al. DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions , 2002, Nucleic Acids Res..
[7] Peter Uetz,et al. The yeast two-hybrid system: a tool for mapping protein-protein interactions. , 2015, Cold Spring Harbor protocols.
[8] Tomasz Imielinski,et al. Mining association rules between sets of items in large databases , 1993, SIGMOD Conference.
[9] P. Bork,et al. Functional organization of the yeast proteome by systematic analysis of protein complexes , 2002, Nature.
[10] Burkhard Rost,et al. Evolutionary profiles improve protein-protein interaction prediction from sequence , 2015, Bioinform..
[11] Narayanaswamy Srinivasan,et al. Nucleic Acids Research Advance Access published June 21, 2007 PIC: Protein Interactions Calculator , 2007 .
[12] B. Williams,et al. Mapping and quantifying mammalian transcriptomes by RNA-Seq , 2008, Nature Methods.
[13] Min Li,et al. Protein-protein interaction site prediction through combining local and global features with deep neural networks , 2019, Bioinform..
[14] V. S. Rao,et al. Protein-Protein Interaction Detection: Methods and Analysis , 2014, International journal of proteomics.
[15] Baldomero Oliva,et al. iLoops: a protein-protein interaction prediction server based on structural features , 2013, Bioinform..
[16] Julie P M Viala,et al. Protein-Protein Interaction: Tandem Affinity Purification in Bacteria. , 2017, Methods in molecular biology.
[17] G Andrew Woolley,et al. Yeast Two Hybrid Screening of Photo-Switchable Protein-Protein Interaction Libraries. , 2020, Journal of molecular biology.
[18] Abdulaziz Yousef,et al. A novel method based on new adaptive LVQ neural network for predicting protein-protein interactions from protein sequences. , 2013, Journal of theoretical biology.
[19] P. Cohen,et al. The regulation of protein function by multisite phosphorylation--a 25 year update. , 2000, Trends in biochemical sciences.
[20] Y. Ivarsson,et al. Interaction Analysis through Proteomic Phage Display , 2014, BioMed research international.
[21] Kenny Q. Ye,et al. An integrated map of genetic variation from 1,092 human genomes , 2012, Nature.
[22] Witold Pedrycz,et al. Protein complex identification through Markov clustering with firefly algorithm on dynamic protein-protein interaction networks , 2016, Inf. Sci..
[23] B. Douzi,et al. Protein-Protein Interactions: Surface Plasmon Resonance. , 2017, Methods in molecular biology.
[24] Bo-Yu Huang,et al. High-Throughput Screening of Sulfated Proteins by Using a Genome-Wide Proteome Microarray and Protein Tyrosine Sulfation System. , 2017, Analytical chemistry.
[25] AgrawalRakesh,et al. Mining association rules between sets of items in large databases , 1993 .
[26] D. Kihara,et al. Predicting permanent and transient protein–protein interfaces , 2013, Proteins.
[27] Giuseppe Troiano,et al. The crucial role of protein phosphorylation in cell signaling and its use as targeted therapy (Review) , 2017, International journal of molecular medicine.
[28] Pascal Braun,et al. History of protein–protein interactions: From egg‐white to complex networks , 2012, Proteomics.
[29] Li-Jun Bi,et al. The Ser/Thr Protein Kinase Protein-Protein Interaction Map of M. tuberculosis* , 2017, Molecular & Cellular Proteomics.
[30] Luhua Lai,et al. Sequence-based prediction of protein protein interaction using a deep-learning algorithm , 2017, BMC Bioinformatics.
[31] Mingwei Liu,et al. Proteomics identifies new therapeutic targets of early-stage hepatocellular carcinoma , 2019, Nature.