Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq.
暂无分享,去创建一个
[1] R. Sauer,et al. OMP Peptide Signals Initiate the Envelope-Stress Response by Activating DegS Protease via Relief of Inhibition Mediated by Its PDZ Domain , 2003, Cell.
[2] Jean-François Jacques,et al. The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis , 2007, Molecular microbiology.
[3] Jean-François Jacques,et al. Small RNA-induced mRNA degradation achieved through both translation block and activated cleavage. , 2011, Genes & development.
[4] R. Breaker,et al. In-line probing analysis of riboswitches. , 2008, Methods in molecular biology.
[5] J. Vogel,et al. In vivo expression and purification of aptamer-tagged small RNA regulators , 2009, Nucleic acids research.
[6] D. Touati,et al. Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator , 2004, The EMBO journal.
[7] S. Marzi,et al. Ribosomal initiation complexes probed by toeprinting and effect of trans-acting translational regulators in bacteria. , 2009, Methods in molecular biology.
[8] G. Storz,et al. Target prediction for small, noncoding RNAs in bacteria , 2006, Nucleic acids research.
[9] H. Aiba,et al. RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. , 2005, Genes & development.
[10] G. Storz,et al. The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF‐I) protein , 1998, The EMBO journal.
[11] H. Aiba,et al. Hfq binding at RhlB‐recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli , 2011, Molecular microbiology.
[12] P. Højrup,et al. Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction. , 2002, Molecular cell.
[13] G. Storz,et al. The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs. , 2002, Molecular cell.
[14] I. Moll,et al. Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding. , 2000, Genes & development.
[15] É. Massé,et al. A small RNA promotes siderophore production through transcriptional and metabolic remodeling , 2010, Proceedings of the National Academy of Sciences.
[16] P. Valentin‐Hansen,et al. Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins. , 2006, Journal of molecular biology.
[17] N. Majdalani,et al. DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[18] S. Gottesman,et al. A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[19] J. August,et al. Factor Fraction required for the Synthesis of Bacteriophage Qβ-RNA , 1968, Nature.
[20] S. R. Kushner,et al. The Sm‐like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli , 2004, Molecular microbiology.
[21] E. Wagner,et al. Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis , 2010, The EMBO journal.
[22] J. Vogel,et al. σE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay , 2006, Molecular microbiology.
[23] Sarah E. Ades,et al. Regulation by destruction: design of the sigmaE envelope stress response. , 2008, Current opinion in microbiology.
[24] R. Gunsalus,et al. Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr , 1995, Molecular microbiology.
[25] P. Valentin‐Hansen,et al. Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon. , 2002, Genes & development.
[26] W. S. Hayward,et al. Bacterial proteins required for replication of phage Q ribonucleic acid. Pruification and properties of host factor I, a ribonucleic acid-binding protein. , 1972, The Journal of biological chemistry.
[27] H. Aiba,et al. Evidence for two functional gal promoters in intact Escherichia coli cells. , 1981, The Journal of biological chemistry.
[28] P. Valentin‐Hansen,et al. MicroReview: The bacterial Sm‐like protein Hfq: a key player in RNA transactions , 2004, Molecular microbiology.
[29] India G. Hook-Barnard,et al. Identification of an AU-rich Translational Enhancer within the Escherichia coli fepB Leader RNA , 2007, Journal of bacteriology.
[30] J. Vogel,et al. Evidence for an autonomous 5′ target recognition domain in an Hfq-associated small RNA , 2010, Proceedings of the National Academy of Sciences.
[31] H. Noller,et al. Footprinting mRNA‐ribosome complexes with chemical probes. , 1994, The EMBO journal.
[32] J. Vogel,et al. An antisense RNA inhibits translation by competing with standby ribosomes. , 2007, Molecular cell.
[33] G. Storz,et al. Regulatory RNAs in Bacteria , 2009, Cell.
[34] J. Vogel,et al. Small RNA binding to 5' mRNA coding region inhibits translational initiation. , 2008, Molecular cell.
[35] G. Storz,et al. Identification of novel small RNAs using comparative genomics and microarrays. , 2001, Genes & development.
[36] Jean-François Jacques,et al. RyhB small RNA modulates the free intracellular iron pool and is essential for normal growth during iron limitation in Escherichia coli , 2006, Molecular microbiology.
[37] J. Vogel,et al. RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria. , 2003, Nucleic acids research.
[38] G. Church,et al. Genomic sequencing. , 1993, Methods in molecular biology.
[39] J. Vogel,et al. Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation , 2009, Nature Structural &Molecular Biology.
[40] H. Aiba,et al. PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action , 2011, Proceedings of the National Academy of Sciences.
[41] S. Ryu,et al. Glucose repression of the Escherichia coli sdhCDAB operon, revisited: regulation by the CRP·cAMP complex , 2005, Nucleic acids research.
[42] E. Hajnsdorf,et al. Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[43] J. Vogel,et al. A small RNA regulates multiple ABC transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sites. , 2007, Genes & development.
[44] S. Gottesman,et al. The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli. , 1996, The EMBO journal.
[45] G. Storz,et al. The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. , 2011, Molecular cell.
[46] H. Aiba,et al. RNA, but not protein partners, is directly responsible for translational silencing by a bacterial Hfq-binding small RNA , 2008, Proceedings of the National Academy of Sciences.
[47] S. Gottesman,et al. Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. , 2003, Genes & development.
[48] S. Gottesman,et al. Effect of RyhB Small RNA on Global Iron Use in Escherichia coli , 2005, Journal of bacteriology.
[49] J. Steitz,et al. Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs. , 1976, The Journal of biological chemistry.
[50] É. Massé,et al. Small RNA‐induced differential degradation of the polycistronic mRNA iscRSUA , 2009, The EMBO journal.
[51] J. Vogel,et al. Hfq and its constellation of RNA , 2011, Nature Reviews Microbiology.
[52] K. Nierhaus,et al. How the ribosome moves along the mRNA during protein synthesis. , 1994, The Journal of biological chemistry.
[53] M P Deutscher,et al. A uridine-rich sequence required for translation of prokaryotic mRNA. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[54] J. Dahlberg,et al. A gene between polA and glnA retards growth of Escherichia coli when present in multiple copies: physiological effects of the gene for spot 42 RNA , 1982, Journal of bacteriology.
[55] Marc Dreyfus,et al. AU-Rich Sequences within 5′ Untranslated Leaders Enhance Translation and Stabilize mRNA in Escherichia coli , 2005, Journal of bacteriology.
[56] M. Dreyfus,et al. Function in Escherichia coli of the non‐catalytic part of RNase E: role in the degradation of ribosome‐free mRNA , 2002, Molecular microbiology.
[57] T. Link,et al. Structure of Escherichia coli Hfq bound to polyriboadenylate RNA , 2009, Proceedings of the National Academy of Sciences.