High Frequency Retrotransposition in Cultured Mammalian Cells

We previously isolated two human L1 elements (L1.2 and LRE2) as the progenitors of disease-producing insertions. Here, we show these elements can actively retrotranspose in cultured mammalian cells. When stably expressed from an episome in HeLa cells, both elements retrotransposed into a variety of chromosomal locations at a high frequency. The retrotransposed products resembled endogenous L1 insertions, since they were variably 5' truncated, ended in poly(A) tracts, and were flanked by target-site duplications or short deletions. Point mutations in conserved domains of the L1.2-encoded proteins reduced retrotransposition by 100- to 1000-fold. Remarkably, L1.2 also retrotransposed in a mouse cell line, suggesting a potential role for L1-based vectors in random insertional mutagenesis.

[1]  S. Holmes,et al.  Studies on p40, the leucine zipper motif-containing protein encoded by the first open reading frame of an active human LINE-1 transposable element. , 1992, The Journal of biological chemistry.

[2]  M. Hattori,et al.  L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein , 1986, Nature.

[3]  P. Perlman,et al.  Group II intron mobility occurs by target DNA-primed reverse transcription , 1995, Cell.

[4]  M. Belfort An expanding universe of introns. , 1993, Science.

[5]  J. Yates,et al.  Stable replication of plasmids derived from Epstein–Barr virus in various mammalian cells , 1985, Nature.

[6]  T. Heidmann,et al.  mRNA retroposition in human cells: processed pseudogene formation. , 1995, The EMBO journal.

[7]  T. Heidmann,et al.  An indicator gene for detection of germline retrotransposition in transgenic Drosophila demonstrates RNA‐mediated transposition of the LINE I element. , 1991, The EMBO journal.

[8]  T. Heidmann,et al.  Generation of processed pseudogenes in murine cells. , 1993, The EMBO journal.

[9]  J. B. Cohen,et al.  "Retroposon" insertion into the cellular oncogene c-myc in canine transmissible venereal tumor. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[10]  K. Kinzler,et al.  Disruption of the APC gene by a retrotransposal insertion of L1 sequence in a colon cancer. , 1992, Cancer research.

[11]  T. Kunkel,et al.  Efficient site-directed mutagenesis using uracil-containing DNA. , 1991, Methods in enzymology.

[12]  R. E. Thayer,et al.  Translation of LINE-1 DNA elements in vitro and in human cells. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[13]  S. Kingsmore,et al.  Glycine receptor β–subunit gene mutation in spastic mouse associated with LINE–1 element insertion , 1994, Nature Genetics.

[14]  H. Ishihara,et al.  Unusual long target duplication by insertion of intracisternal A‐particle element in radiation‐induced acute myeloid leukemia cells in mouse , 1995, FEBS letters.

[15]  M. Meisler,et al.  Mutation Detection in the med and medJ Alleles of the Sodium Channel Scn8a , 1996, The Journal of Biological Chemistry.

[16]  T. Eickbush,et al.  Origin and evolution of retroelements based upon their reverse transcriptase sequences. , 1990, The EMBO journal.

[17]  J. V. Moran,et al.  Mobile group II introns of yeast mitochondrial DNA are novel site-specific retroelements , 1995, Molecular and cellular biology.

[18]  T. Heidmann,et al.  An indicator gene to demonstrate intracellular transposition of defective retroviruses. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[19]  S. Antonarakis,et al.  Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man , 1988, Nature.

[20]  T. Eickbush,et al.  RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element , 1995, Molecular and cellular biology.

[21]  G. Swergold Identification, characterization, and cell specificity of a human LINE-1 promoter , 1990, Molecular and cellular biology.

[22]  A. Pélisson,et al.  Evidence for retrotransposition of the I factor, a LINE element of Drosophila melanogaster. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[23]  T. Heidmann,et al.  Retrotransposition of a mouse IAP sequence tagged with an indicator gene , 1991, Cell.

[24]  M F Singer,et al.  LINE-1: a mammalian transposable element. , 1987, Biochimica et biophysica acta.

[25]  M. Hattori,et al.  Identification of an internal cis-element essential for the human L1 transcription and a nuclear factor(s) binding to the element. , 1992, Nucleic acids research.

[26]  J. Boeke,et al.  Reverse transcriptase encoded by a human transposable element. , 1991, Science.

[27]  M. Hattori,et al.  RNA polymerase III dependence of the human L1 promoter and possible participation of the RNA polymerase II factor YY1 in the RNA polymerase III transcription system. , 1995, Nucleic acids research.

[28]  R. E. Thayer,et al.  LINE-1: a human transposable element. , 1993, Gene.

[29]  T. Eickbush,et al.  The site-specific ribosomal insertion element type II of Bombyx mori (R2Bm) contains the coding sequence for a reverse transcriptase-like enzyme , 1987, Molecular and cellular biology.

[30]  J. Coffin,et al.  Mechanism of transduction by retroviruses. , 1992, Science.

[31]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[32]  S. Wessler,et al.  Transduction of a cellular gene by a plant retroelement , 1994, Cell.

[33]  J. Boeke,et al.  An in vivo assay for the reverse transcriptase of human retrotransposon L1 in Saccharomyces cerevisiae , 1994, Molecular and cellular biology.

[34]  H. Hohjoh,et al.  Cytoplasmic ribonucleoprotein complexes containing human LINE‐1 protein and RNA. , 1996, The EMBO journal.

[35]  A. Furano,et al.  The structure of the guanine-rich polypurine:polypyrimidine sequence at the right end of the rat L1 (LINE) element. , 1989, The Journal of biological chemistry.

[36]  G. Fink,et al.  Ty elements transpose through an RNA intermediate , 1985, Cell.

[37]  D. Garfinkel,et al.  Single-step selection for Ty1 element retrotransposition. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[38]  T. Heidmann,et al.  Retrotransposition of the Drosophila LINE I element can induce deletion in the target DNA: a simple model also accounting for the variability of the normally observed target site duplications. , 1994, Biochemical and biophysical research communications.

[39]  H. Nishio,et al.  Insertion of a 5' truncated L1 element into the 3' end of exon 44 of the dystrophin gene resulted in skipping of the exon during splicing in a case of Duchenne muscular dystrophy. , 1993, The Journal of clinical investigation.

[40]  A. F. Scott,et al.  Isolation of an active human transposable element. , 1991, Science.

[41]  R. Hardison,et al.  Long interspersed L1 repeats in rabbit DNA are homologous to L1 repeats of rodents and primates in an open-reading-frame region. , 1986, Molecular biology and evolution.

[42]  A. Lambowitz,et al.  A group II intron RNA is a catalytic component of a DNA endonuclease involved in intron mobility , 1995, Cell.

[43]  T. Eickbush,et al.  Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition , 1993, Cell.

[44]  D. Mager,et al.  A modified indicator gene for selection of retrotransposition events in mammalian cells. , 1994, BioTechniques.

[45]  M. Fischer,et al.  The spastic mouse: Aberrant splicing of glycine receptor β subunit mRNA caused by intronic insertion of Ll element , 1994, Neuron.

[46]  Teri,et al.  Molecular Cloning A Laboratory Manual Second Edition Sambrook , 1989 .

[47]  R. Palmiter,et al.  Retrotransposition of a mouse L1 element. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[48]  Y. Hayashizaki,et al.  Dysfunction of the Orleans reeler gene arising from exon skipping due to transposition of a full-length copy of an active L1 sequence into the skipped exon. , 1996, Human molecular genetics.

[49]  C. Hutchison,et al.  Conservation throughout mammalia and extensive protein-encoding capacity of the highly repeated DNA long interspersed sequence one. , 1986, Journal of molecular biology.

[50]  A. Spradling,et al.  Insertional mutagenesis of the Drosophila genome with single P elements. , 1988, Science.

[51]  D. Garfinkel,et al.  RNA-mediated recombination in S. cerevisiae , 1991, Cell.

[52]  H. Kazazian,et al.  A new retrotransposable human L1 element from the LRE2 locus on chromosome 1q produces a chimaeric insertion , 1994, Nature Genetics.

[53]  M. Wickens,et al.  A sequence downstream of A-A-U-A-A-A is required for formation of simian virus 40 late mRNA 3' termini in frog oocytes. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[54]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[55]  S. Antonarakis,et al.  Characterization of a nondeleterious L1 insertion in an intron of the human factor VIII gene and further evidence of open reading frames in functional L1 elements. , 1989, Genomics.

[56]  A. F. Scott,et al.  Origin of the human L1 elements: Proposed progenitor genes deduced from a consensus DNA sequence☆ , 1987, Genomics.

[57]  J. Spandorfer,et al.  Insertional mutagenesis of the myc locus by a LINE-1 sequence in a human breast carcinoma , 1988, Nature.

[58]  S. Martin,et al.  Ribonucleoprotein particles with LINE-1 RNA in mouse embryonal carcinoma cells , 1991, Molecular and cellular biology.

[59]  T. Fanning,et al.  The LINE-1 DNA sequences in four mammalian orders predict proteins that conserve homologies to retrovirus proteins. , 1987, Nucleic acids research.

[60]  Jef D Boeke,et al.  Human L1 Retrotransposon Encodes a Conserved Endonuclease Required for Retrotransposition , 1996, Cell.

[61]  I. Arkhipova Complex patterns of transcription of a Drosophila retrotransposon in vivo and in vitro by RNA polymerases II and III. , 1995, Nucleic acids research.

[62]  Elizabeth Phillips,et al.  The Site , 1988, Palestine Is Throwing a Party and the Whole World Is Invited.