The effect of heating rate on Escherichia coli metabolism, physiological stress, transcriptional response, and production of temperature‐induced recombinant protein: A scale‐down study
暂无分享,去创建一个
Francisco Bolívar | Luis Caspeta | Noemí Flores | F. Bolivar | N. Pérez | Luis Caspeta | O. Ramírez | N. Flores | Octavio T Ramírez | Néstor O Pérez
[1] P. Christen,et al. Control of the DnaK Chaperone Cycle by Substoichiometric Concentrations of the Co-chaperones DnaJ and GrpE* , 1998, The Journal of Biological Chemistry.
[2] E. Laskowska,et al. Escherichia coli small heat shock proteins IbpA/B enhance activity of enzymes sequestered in inclusion bodies. , 2004, Acta biochimica Polonica.
[3] W. Bentley,et al. Heat-shock and stringent responses have overlapping protease activity in Escherichia coli , 1999, Applied biochemistry and biotechnology.
[4] C. Georgopoulos,et al. The DnaJ chaperone catalytically activates the DnaK chaperone to preferentially bind the sigma 32 heat shock transcriptional regulator. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[5] F. Bolivar,et al. New Insights into the Role of Sigma Factor RpoS as Revealed in Escherichia coli Strains Lacking the Phosphoenolpyruvate:Carbohydrate Phosphotransferase System , 2007, Journal of Molecular Microbiology and Biotechnology.
[6] Francisco Bolívar,et al. Culture of Escherichia coli under dissolved oxygen gradients simulated in a two-compartment scale-down system: metabolic response and production of recombinant protein. , 2005, Biotechnology and bioengineering.
[7] A. Veide,et al. Influence of scale-up on the quality of recombinant human growth hormone. , 2000, Biotechnology and bioengineering.
[8] M. Zółkiewski,et al. ClpB Cooperates with DnaK, DnaJ, and GrpE in Suppressing Protein Aggregation , 1999, The Journal of Biological Chemistry.
[9] S. Rüdiger,et al. Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB , 1999, The EMBO journal.
[10] Daniel N. Wilson,et al. Dissection of the mechanism for the stringent factor RelA. , 2002, Molecular cell.
[11] C. Gross,et al. Isolation and characterization of Escherichia coli mutants that lack the heat shock sigma factor sigma 32 , 1988, Journal of bacteriology.
[12] D. J. Naylor,et al. Proteome-wide Analysis of Chaperonin-Dependent Protein Folding in Escherichia coli , 2005, Cell.
[13] T. Ogura,et al. Involvement of FtsH in protein assembly into and through the membrane. I. Mutations that reduce retention efficiency of a cytoplasmic reporter. , 1994, The Journal of biological chemistry.
[14] P. Neubauer,et al. The small heat-shock proteins IbpA and IbpB reduce the stress load of recombinant Escherichia coli and delay degradation of inclusion bodies , 2005, Microbial cell factories.
[15] R. Wallace,et al. Maintenance coefficients and rates of turnover of cell material in Escherichia coli ML308 at different growth temperatures , 1986 .
[16] G. Hamer,et al. Heat shock gene expression in continuous cultures of Escherichia coli. , 1992, Journal of biotechnology.
[17] S. Enfors,et al. Scale down of recombinant protein production: a comparative study of scaling performance , 1999 .
[18] P. Bouloc,et al. Degradation of sigma 32, the heat shock regulator in Escherichia coli, is governed by HflB. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[19] T. Tsuchido,et al. Escherichia coli small heat shock proteins, IbpA and IbpB, protect enzymes from inactivation by heat and oxidants. , 2002, European journal of biochemistry.
[20] U. Rinas,et al. On-line estimation of the metabolic burden resulting from the synthesis of plasmid-encoded and heat-shock proteins by monitoring respiratory energy generation. , 2001, Biotechnology and bioengineering.
[21] Y. Nakamura,et al. Transient regulation of protein synthesis in Escherichia coli upon shift-up of growth temperature , 1978, Journal of bacteriology.
[22] F. Neidhardt,et al. Transient rates of synthesis of individual polypeptides in E. coli following temperature shifts , 1978, Cell.
[23] Thomas D. Schmittgen,et al. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.
[24] Francisco Bolívar,et al. Transcriptional and metabolic response of recombinant Escherichia coli to spatial dissolved oxygen tension gradients simulated in a scale-down system. , 2006, Biotechnology and bioengineering.
[25] I. Herskowitz,et al. hflB, a new Escherichia coli locus regulating lysogeny and the level of bacteriophage lambda cII protein. , 1986, Journal of molecular biology.
[26] J. W. Campbell,et al. Expression of two recombinant chloramphenicol acetyltransferase variants in highly reduced genome Escherichia coli strains , 2007, Biotechnology and bioengineering.
[27] Frank Hoffmann,et al. Metabolic adaptation of Escherichia coli during temperature-induced recombinant protein production: 2. Redirection of metabolic fluxes. , 2002, Biotechnology and bioengineering.
[28] U. Rinas. Synthesis Rates of Cellular Proteins Involved in Translation and Protein Folding Are Strongly Altered in Response to Overproduction of Basic Fibroblast Growth Factor by Recombinant Escherichia coli , 1996, Biotechnology progress.
[29] U. Rinas,et al. Comparison of temperature- and isopropyl-β-d-thiogalacto-pyranoside-induced synthesis of basic fibroblast growth factor in high-cell-density cultures of recombinant Escherichia coli , 1995 .
[30] T. Yamamori,et al. Temperature-induced synthesis of specific proteins in Escherichia coli: evidence for transcriptional control , 1980, Journal of bacteriology.
[31] Carol A. Gross,et al. The heat shock response of E. coli is regulated by changes in the concentration of σ32 , 1987, Nature.
[32] C. Hewitt,et al. Studies related to the scale-up of high-cell-density E. coli fed-batch fermentations using multiparameter flow cytometry: effect of a changing microenvironment with respect to glucose and dissolved oxygen concentration. , 2000, Biotechnology and bioengineering.
[33] G W Luli,et al. Comparison of growth, acetate production, and acetate inhibition of Escherichia coli strains in batch and fed-batch fermentations , 1990, Applied and environmental microbiology.
[34] Richard R. Burgess,et al. The Global Transcriptional Response of Escherichia coli to Induced σ32 Protein Involves σ32 Regulon Activation Followed by Inactivation and Degradation of σ32 in Vivo* , 2005, Journal of Biological Chemistry.
[35] M. Cashel,et al. The stringent response , 1996 .
[36] Alan J Wolfe,et al. Glucose metabolism at high density growth of E. coli B and E. coli K: differences in metabolic pathways are responsible for efficient glucose utilization in E. coli B as determined by microarrays and Northern blot analyses. , 2005, Biotechnology and bioengineering.
[37] S. R. Kushner,et al. The Escherichia coli mrsC Gene Is Required for Cell Growth and mRNA Decay , 1998, Journal of bacteriology.
[38] H. Westerhoff,et al. The Extent to Which ATP Demand Controls the Glycolytic Flux Depends Strongly on the Organism and Conditions for Growth , 2004, Molecular Biology Reports.
[39] C. Gross,et al. Consensus sequence for Escherichia coli heat shock gene promoters. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[40] Christoph Wittmann,et al. Response of fluxome and metabolome to temperature-induced recombinant protein synthesis in Escherichia coli. , 2007, Journal of biotechnology.
[41] L. A. Palomares,et al. Production of recombinant proteins: challenges and solutions. , 2004, Methods in molecular biology.
[42] S. Harcum,et al. Global transcriptome response of recombinant Escherichia coli to heat-shock and dual heat-shock recombinant protein induction , 2006, Journal of Industrial Microbiology and Biotechnology.
[43] A. Villaverde,et al. Fine regulation of cI857-controlled gene expression in continuous culture of recombinant Escherichia coli by temperature , 1993, Applied and environmental microbiology.
[44] Alvaro R. Lara,et al. Living with heterogeneities in bioreactors , 2006, Molecular biotechnology.
[45] C. Ueguchi,et al. Effects of mutations in heat‐shock genes groES and groEL on protein export in Escherichia coli. , 1989, EMBO Journal.
[46] U. Rinas,et al. Temperature-induced production of recombinant human insulin in high-cell density cultures of recombinant Escherichia coli. , 1999, Journal of biotechnology.
[47] D. Clark,et al. Mutants of Escherichia coli deficient in the fermentative lactate dehydrogenase , 1989, Journal of bacteriology.
[48] F. Neidhardt,et al. Levels of major proteins of Escherichia coli during growth at different temperatures , 1979, Journal of bacteriology.
[49] H. Mori,et al. Induction of heat shock proteins by abnormal proteins results from stabilization and not increased synthesis of sigma 32 in Escherichia coli , 1994, Journal of bacteriology.
[50] T. Nyström,et al. Regulation of sigma factor competition by the alarmone ppGpp. , 2002, Genes & development.
[51] J. Nielsen,et al. Bioreaction Engineering Principles , 1994, Springer US.
[52] F. Hartl,et al. Polypeptide Flux through Bacterial Hsp70 DnaK Cooperates with Trigger Factor in Chaperoning Nascent Chains , 1999, Cell.
[53] M. Hecker,et al. Monitoring of genes that respond to process-related stress in large-scale bioprocesses. , 1999, Biotechnology and bioengineering.
[54] U. Rinas,et al. Metabolic adaptation of Escherichia coli during temperature-induced recombinant protein production: 1. Readjustment of metabolic enzyme synthesis. , 2002, Biotechnology and bioengineering.
[55] Francisco Bolívar,et al. Utility of an Escherichia coli strain engineered in the substrate uptake system for improved culture performance at high glucose and cell concentrations: An alternative to fed‐batch cultures , 2008, Biotechnology and bioengineering.
[56] P. Neubauer,et al. Role of the general stress response during strong overexpression of a heterologous gene in Escherichia coli , 2002, Applied Microbiology and Biotechnology.
[57] S. Morimura,et al. The Escherichia coli FtsH protein is a prokaryotic member of a protein family of putative ATPases involved in membrane functions, cell cycle control, and gene expression , 1993, Journal of bacteriology.
[58] S. Yokoyama,et al. Structural Basis for Transcription Regulation by Alarmone ppGpp , 2004, Cell.
[59] M. Rhodes,et al. Temperature-induced synthesis of recombinant proteins , 1986 .
[60] B. Bukau,et al. Substrate shuttling between the DnaK and GroEL systems indicates a chaperone network promoting protein folding. , 1996, Journal of molecular biology.
[61] K. Rudd,et al. Characterization of the spoT gene of Escherichia coli. , 1989, The Journal of biological chemistry.
[62] Francisco Bolívar,et al. Adaptation for fast growth on glucose by differential expression of central carbon metabolism and gal regulon genes in an Escherichia coli strain lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system. , 2005, Metabolic engineering.
[63] J. Gierse,et al. Two novel heat shock genes encoding proteins produced in response to heterologous protein expression in Escherichia coli , 1992, Journal of bacteriology.
[64] N. Kjeldgaard,et al. The physiology of stringent factor (ATP:GTP 3'-diphosphotransferase) in Escherichia coli. , 1986, Biochimie.