Image Registration Driven by Combined Probabilistic and Geometric Descriptors

Deformable image registration in the presence of considerable contrast differences and large-scale size and shape changes represents a significant challenge for image registration. A representative driving application is the study of early brain development in neuroimaging, which requires co-registration of images of the same subject across time or building 4-D population atlases. Growth during the first few years of development involves significant changes in size and shape of anatomical structures but also rapid changes in tissue properties due to myelination and structuring that are reflected in the multi-modal Magnetic Resonance (MR) contrast measurements. We propose a new registration method that generates a mapping between brain anatomies represented as a multi-compartment model of tissue class posterior images and geometries. We transform intensity patterns into combined probabilistic and geometric descriptors that drive the matching in a diffeomorphic framework, where distances between geometries are represented using currents which does not require geometric correspondence. We show preliminary results on the registrations of neonatal brain MRIs to two-year old infant MRIs using class posteriors and surface boundaries of structures undergoing major changes. Quantitative validation demonstrates that our proposed method generates registrations that better preserve the consistency of anatomical structures over time.

[1]  Gabor Fichtinger,et al.  Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008, 11th International Conference, New York, NY, USA, September 6-10, 2008, Proceedings, Part I , 2008, International Conference on Medical Image Computing and Computer-Assisted Intervention.

[2]  Leslie Greengard,et al.  The Fast Gauss Transform , 1991, SIAM J. Sci. Comput..

[3]  R W Hockney,et al.  Computer Simulation Using Particles , 1966 .

[4]  John H. Gilmore,et al.  Automatic segmentation of MR images of the developing newborn brain , 2005, Medical Image Anal..

[5]  Rebecca C. Knickmeyer,et al.  A Structural MRI Study of Human Brain Development from Birth to 2 Years , 2008, The Journal of Neuroscience.

[6]  Christopher J. Taylor,et al.  Medical Image Computing and Computer-Assisted Intervention – MICCAI 2009 , 2009, Lecture Notes in Computer Science.

[7]  Alain Trouvé,et al.  Sparse Approximation of Currents for Statistics on Curves and Surfaces , 2008, MICCAI.

[8]  Koenraad Van Leemput,et al.  Automated model-based tissue classification of MR images of the brain , 1999, IEEE Transactions on Medical Imaging.

[9]  Michael I. Miller,et al.  Group Actions, Homeomorphisms, and Matching: A General Framework , 2004, International Journal of Computer Vision.

[10]  Nicholas Ayache,et al.  Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I , 2007, MICCAI.

[11]  Daniel Rueckert,et al.  Longitudinal Cortical Registration for Developing Neonates , 2007, MICCAI.

[12]  L. Younes,et al.  Diffeomorphic matching of distributions: a new approach for unlabelled point-sets and sub-manifolds matching , 2004, CVPR 2004.

[13]  Ron Kikinis,et al.  Adaptive, template moderated, spatially varying statistical classification , 2000, Medical Image Anal..

[14]  Daniel Rueckert,et al.  Nonrigid registration using free-form deformations: application to breast MR images , 1999, IEEE Transactions on Medical Imaging.

[15]  Jens H. Krüger,et al.  Fast Parallel Unbiased Diffeomorphic Atlas Construction on Multi-Graphics Processing Units , 2009, EGPGV@Eurographics.

[16]  Guido Gerig,et al.  Particle Based Shape Regression of Open Surfaces with Applications to Developmental Neuroimaging , 2009, MICCAI.