Clustering and observation on neuron tuning property for brain machine interfaces

Neurons' tuning describes how the neural activity responses to the stimulus. As the prior knowledge, understanding more about the neuron tuning helps better decode the movement information from the neural firings for brain machine interfaces. We are interested in qualifying the neural tuning and observe whether there are similar tunings among the ensemble recordings and how they change over time. We propose to implement a linear-nonlinear-Poisson model to describe the neural tuning function. And the function parameters build a feature space, where the neuron tuning characters can be visually observed. We use k-means algorithm to cluster neuron tuning characters and find that there are three types of neurons with different tuning curve shapes. The nonlinear-shaping neurons are not majority in number but have important contribution (evaluated by mutual information) relative to the movement task than the linear ones. Furthermore, we find some neuron tunings shows clear time-varying properties in the feature space, which can be predicted by a random walk model. And we prove it through two kinds of way: Kernel size-CC estimation and Kolmogorov-Smirnov plot (KS plot). The predictable time-varying tuning suggests a better understanding of neuron property and potentially contributes to decode the non-stationary neuron activities.

[1]  J. Donoghue,et al.  Plasticity and primary motor cortex. , 2000, Annual review of neuroscience.

[2]  Jerald D. Kralik,et al.  Real-time prediction of hand trajectory by ensembles of cortical neurons in primates , 2000, Nature.

[3]  R E Kass,et al.  Recursive bayesian decoding of motor cortical signals by particle filtering. , 2004, Journal of neurophysiology.

[4]  Yiwen Wang,et al.  Instantaneous estimation of motor cortical neural encoding for online brain–machine interfaces , 2010, Journal of neural engineering.

[5]  David M. Santucci,et al.  Learning to Control a Brain–Machine Interface for Reaching and Grasping by Primates , 2003, PLoS biology.

[6]  Wei Wu,et al.  Real-Time Decoding of Nonstationary Neural Activity in Motor Cortex , 2008, IEEE Transactions on Neural Systems and Rehabilitation Engineering.

[7]  Xi Chen,et al.  Tracking Time Variant Neuron Tuning Properties of Brain Machine Interfaces , 2013 .

[8]  A B Schwartz,et al.  Motor cortical representation of speed and direction during reaching. , 1999, Journal of neurophysiology.

[9]  J. Kleim,et al.  Motor Learning-Dependent Synaptogenesis Is Localized to Functionally Reorganized Motor Cortex , 2002, Neurobiology of Learning and Memory.

[10]  J.J. Vidal,et al.  Real-time detection of brain events in EEG , 1977, Proceedings of the IEEE.

[11]  José Carlos Príncipe,et al.  Mutual information analysis on non-stationary neuron importance for brain machine interfaces , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[12]  José Carlos Príncipe,et al.  Real time input subset selection for linear time-variant MIMO systems , 2007, Optim. Methods Softw..

[13]  Deniz Erdogmus,et al.  Input-output mapping performance of linear and nonlinear models for estimating hand trajectories from cortical neuronal firing patterns , 2002, Proceedings of the 12th IEEE Workshop on Neural Networks for Signal Processing.

[14]  Eero P. Simoncelli,et al.  To appear in: The New Cognitive Neurosciences, 3rd edition Editor: M. Gazzaniga. MIT Press, 2004. Characterization of Neural Responses with Stochastic Stimuli , 2022 .

[15]  J J Vidal,et al.  Toward direct brain-computer communication. , 1973, Annual review of biophysics and bioengineering.

[16]  Emery N. Brown,et al.  The Time-Rescaling Theorem and Its Application to Neural Spike Train Data Analysis , 2002, Neural Computation.