Quantification of Fluoroquinolone Uptake through the Outer Membrane Channel OmpF of Escherichia coli.

Decreased drug accumulation is a common cause of antibiotic resistance in microorganisms. However, there are few reliable general techniques capable of quantifying drug uptake through bacterial membranes. We present a semiquantitative optofluidic assay for studying the uptake of autofluorescent drug molecules in single liposomes. We studied the effect of the Escherichia coli outer membrane channel OmpF on the accumulation of the fluoroquinolone antibiotic, norfloxacin, in proteoliposomes. Measurements were performed at pH 5 and pH 7, corresponding to two different charge states of norfloxacin that bacteria are likely to encounter in the human gastrointestinal tract. At both pH values, the porins significantly enhance drug permeation across the proteoliposome membranes. At pH 5, where norfloxacin permeability across pure phospholipid membranes is low, the porins increase drug permeability by 50-fold on average. We estimate a flux of about 10 norfloxacin molecules per second per OmpF trimer in the presence of a 1 mM concentration gradient of norfloxacin. We also performed single channel electrophysiology measurements and found that the application of transmembrane voltages causes an electric field driven uptake in addition to concentration driven diffusion. We use our results to propose a physical mechanism for the pH mediated change in bacterial susceptibility to fluoroquinolone antibiotics.

[1]  H. Nikaido,et al.  Porin channels in intact cells of Escherichia coli are not affected by Donnan potentials across the outer membrane. , 1988, The Journal of biological chemistry.

[2]  M. Mckenna,et al.  Antibiotic resistance: The last resort , 2013, Nature.

[3]  H. Zeiler,et al.  Evaluation of the in vitro bactericidal action of ciprofloxacin on cells of Escherichia coli in the logarithmic and stationary phases of growth , 1985, Antimicrobial Agents and Chemotherapy.

[4]  J. Smith,et al.  [Effect of pH value and magnesium on the antibacterial activity of quinolone preparations]. , 1986, Infection.

[5]  H. Bürgmann,et al.  A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota , 2013, Front. Microbiol..

[6]  A. Delcour,et al.  Outer membrane permeability and antibiotic resistance. , 2009, Biochimica et biophysica acta.

[7]  Sergey M. Bezrukov,et al.  Designed to penetrate: Time-resolved interaction of single antibiotic molecules with bacterial pores , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[8]  L. Piddock,et al.  A comparison of methods used for measuring the accumulation of quinolones by Enterobacteriaceae, Pseudomonas aeruginosa and Staphylococcus aureus. , 1991, The Journal of antimicrobial chemotherapy.

[9]  A. Delcour Function and modulation of bacterial porins: insights from electrophysiology. , 1997, FEMS microbiology letters.

[10]  M. Winterhalter,et al.  The porin and the permeating antibiotic: a selective diffusion barrier in Gram-negative bacteria , 2008, Nature Reviews Microbiology.

[11]  K. Lewis,et al.  A new antibiotic kills pathogens without detectable resistance , 2015, Nature.

[12]  C Kung,et al.  Modified reconstitution method used in patch-clamp studies of Escherichia coli ion channels. , 1989, Biophysical journal.

[13]  R. Vale,et al.  μManager: Open Source Software for Light Microscope Imaging , 2007, Microscopy Today.

[14]  Eric Hajjar,et al.  Molecular basis of enrofloxacin translocation through OmpF, an outer membrane channel of Escherichia coli--when binding does not imply translocation. , 2010, The journal of physical chemistry. B.

[15]  T. Ngoc,et al.  RECOVERY OF ANTIBIOTIC RESISTANCE GENES IN NATURAL ENVIRONMENTS , 2014 .

[16]  Michael George,et al.  Rapid screening of membrane protein activity: electrophysiological analysis of OmpF reconstituted in proteoliposomes. , 2008, Lab on a chip.

[17]  M. Winterhalter,et al.  TRANSLOCATION Project: How to Get Good Drugs into Bad Bugs , 2014, Science Translational Medicine.

[18]  D. Hooper,et al.  Cross-resistance to fluoroquinolones in multiple-antibiotic-resistant (Mar) Escherichia coli selected by tetracycline or chloramphenicol: decreased drug accumulation associated with membrane changes in addition to OmpF reduction , 1989, Antimicrobial Agents and Chemotherapy.

[19]  H. Nikaido,et al.  Penetration of lipophilic agents with multiple protonation sites into bacterial cells: tetracyclines and fluoroquinolones as examples , 1993, Antimicrobial Agents and Chemotherapy.

[20]  Joan L. Slonczewski,et al.  pH of the Cytoplasm and Periplasm of Escherichia coli: Rapid Measurement by Green Fluorescent Protein Fluorimetry , 2007, Journal of bacteriology.

[21]  H. Nikaido,et al.  Porin channels in Escherichia coli: studies with liposomes reconstituted from purified proteins , 1983, Journal of bacteriology.

[22]  J. Davies,et al.  Origins and Evolution of Antibiotic Resistance , 1996, Microbiology and Molecular Biology Reviews.

[23]  D. Hooper,et al.  Mechanisms of action of antimicrobials: focus on fluoroquinolones. , 2001, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[24]  I. Booth,et al.  The regulation of expression of the porin gene ompC by acid pH. , 1992, Journal of general microbiology.

[25]  Roland Benz,et al.  Mechanism of sugar transport through the sugar-specific LamB channel ofEscherichia coli outer membrane , 2005, The Journal of Membrane Biology.

[26]  L. Piddock,et al.  Fluoroquinolone resistance: mechanisms, impact on bacteria, and role in evolutionary success. , 2014, Trends in microbiology.

[27]  S. Mitsuhashi,et al.  Isolation and characterization of norfloxacin-resistant mutants of Escherichia coli K-12 , 1986, Antimicrobial Agents and Chemotherapy.

[28]  N J Brooks,et al.  Preparation and mechanical characterisation of giant unilamellar vesicles by a microfluidic method. , 2015, Lab on a chip.

[29]  E. P. Kennedy Osmotic regulation and the biosynthesis of membrane-derived oligosaccharides in Escherichia coli. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[30]  Ryuta Kishii,et al.  Relationship between the expression of ompF and quinolone resistance in Escherichia coli , 2009, Journal of infection and chemotherapy : official journal of the Japan Society of Chemotherapy.

[31]  Heather K. Allen,et al.  Call of the wild: antibiotic resistance genes in natural environments , 2010, Nature Reviews Microbiology.

[32]  G. Schwarz,et al.  On translocation through a membrane channel via an internal binding site: kinetics and voltage dependence. , 2003, Biophysical journal.

[33]  U. Keyser,et al.  A label-free microfluidic assay to quantitatively study antibiotic diffusion through lipid membranes. , 2014, Lab on a chip.

[34]  J. Adler,et al.  Ion channel activities in the Escherichia coli outer membrane. , 1990, Biochimica et biophysica acta.

[35]  A. Brien The last resort. , 1980, Times.

[36]  M. Winterhalter,et al.  Antibiotic permeation across the OmpF channel: modulation of the affinity site in the presence of magnesium. , 2012, The journal of physical chemistry. B.

[37]  J. Pagés,et al.  Antibiotic Transport in Resistant Bacteria: Synchrotron UV Fluorescence Microscopy to Determine Antibiotic Accumulation with Single Cell Resolution , 2012, PloS one.

[38]  A. Berezhkovskii,et al.  Diffusion model of solute dynamics in a membrane channel: mapping onto the two-site model and optimizing the flux. , 2007, The Journal of chemical physics.

[39]  L. Piddock,et al.  Quinolone accumulation by Pseudomonas aeruginosa, Staphylococcus aureus and Escherichia coli. , 1999, The Journal of antimicrobial chemotherapy.

[40]  G. Whitesides,et al.  Soft lithography for micro- and nanoscale patterning , 2010, Nature Protocols.

[41]  D. Hooper,et al.  Mechanisms of quinolone resistance in Escherichia coli: characterization of nfxB and cfxB, two mutant resistance loci decreasing norfloxacin accumulation , 1989, Antimicrobial Agents and Chemotherapy.

[42]  F. Yoshimura,et al.  Diffusion of beta-lactam antibiotics through the porin channels of Escherichia coli K-12 , 1985, Antimicrobial Agents and Chemotherapy.

[43]  M Montal,et al.  Formation of bimolecular membranes from lipid monolayers and a study of their electrical properties. , 1972, Proceedings of the National Academy of Sciences of the United States of America.